BAC Information

Click to search

BAC

Clone NameB6Ng01-094P18
Chromosome6 (Build37)
Map Location 76,074,903 - 76,216,074
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145, EG546907
Downstream geneLOC100042952, LOC668153, EG668155, LOC100042956, Ctnna2, Lrrtm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094P18.bB6Ng01-094P18.g
ACCDH906048DH906049
length1,131951
definitionDH906048|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P18, 5' end.DH906049|Mus musculus domesticus DNA, BAC clone: B6Ng01-094P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,074,903 - 76,076,049)(76,215,536 - 76,216,074)
sequence
gaattcctacaacatctaataagatggaagaagaggagagcattcctgct
tatattcaacaggaacataaaattaggtttagtgaattctagtagcaaac
ttgtagtatacaacatgagaatgttaaaaagggaaaggaagagaaagaaa
gaaagaaagaaagaagccatagtaaccaacctatcccacccccctgatca
tggcctcagagctatccgtgctatatactatagtctcctctgaaatctct
gcaaataaaagcatcatttcagagtggattctcactctcatctacccttt
catccttggttttaacccaaatgccacttttcaaatacattcacaatata
tgtctcaaatttgtttttgaaatggcctctgcctgtgttcagttgagaca
tacagaaacacattcaaaataaaacagaaagatcactgctacagaggtag
agaactctataaaaatagcaagaagaaaaaaatcaaatggagaaatctag
aggaaaagatactgaaggttcgatgcgggaagatacaacatcagagatta
ttctcacaggctacattcccttttttcctgaacatgagggaaatttgaat
aaaaggagaatgagaagggcatggagctcacaggctaggtgtctgaacga
aataacagatggtataatgttccagggaagaggattggaggtataaatag
aaagatctgtggctataacactttttctcaatggcattctatcagagaaa
cctgagattagatttttactgttacttctgtggataagaattaaacaata
gtaaagatactcccaggccaaaaaaaataaaaaaattaaaaaataagggc
agggactacacattgaatttcttacattttataataaagtaattgaactc
aattatttctgggttgtctatacacaagagatacatgaagcatatttcaa
tttcaaagcgtgttttctatatatactaattaaaccaagtatgtgtacct
gtcttttctgttcatttatttttgtaacagaacaaatttgtgcacaggaa
aatggaaatttggagaggacaactgataatgtggttattgggagaaaaga
taaaaatgaaatctatcaccctttagaataa
gaattctctttctctctcatcccccatcctcacccttttatgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgaattgccacaaggctaggtttctgtatatg
ctggaatcctgaagatgtaggctgccatgccagtgaaggaatgtatgcaa
aacaaggacaaacaggcagagtagtgaaatcttccttcctccatgttttt
atatatgttgccagtaggaagtgtggctcaggttaaaggtgtgtattatg
actttcagttctggataagaagattttgtccaacctcaaaactatggact
tcaagtggacttgcctacatcaaaccaggaagaaaatttctcaaaattgt
acactctgtatctggattagagttcattacaaatatcataaagttgataa
ccaagaatagtattcatacattaaattaaattaatgtttagagaatatct
atagcttcttgtcgccactctgaccacaatggattaaaggtaaaaataag
caggaagtaaaatactatataaaatccacaaattcaaggaaattaaacat
aatcaatcaaattaaaagtgaaaatgaaaacattttgccagatagcaatg
aaattcagaaaatcctaaagacatatcttgaaaaatttaatgcccataaa
aatataacataaaaaaaatcaataaatttctggatataaacaaactatca
aaatctagctaagttgatataaaaataaaacattgaaaattatcaatgag
attaaaatactgataaaataaaactttcaagcaaaaaattaagagggttg
agataaattaccactgtattctccaagacccttatagaactaacactact
aatcctcaaactacttcacaataaaaaaattaagattgctattagatagt
atttataattacaactatttccctgaagactaaaattagatagcccacat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_76074903_76076049
seq2: B6Ng01-094P18.b_48_1178

seq1  GAATTCCTACAACATCTAATAAGATGGAAGAAGAGGAGAGCATTCCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAACATCTAATAAGATGGAAGAAGAGGAGAGCATTCCTGCT  50

seq1  TATATTCAACAGGAACATAAAATTAGGTTTAGTGAATTCTAGTAGCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCAACAGGAACATAAAATTAGGTTTAGTGAATTCTAGTAGCAAAC  100

seq1  TTGTAGTATACAACATGAGAATGTTAAAAAGGGAAAGGAAGAGAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTATACAACATGAGAATGTTAAAAAGGGAAAGGAAGAGAAAGAAA  150

seq1  GAAAGAAAGAAAGAAGCCATAGTAACCAACCTATCCCACCCCCCTGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAGCCATAGTAACCAACCTATCCCACCCCCCTGATCA  200

seq1  TGGCCTCAGAGCTATCCGTGCTATATACTATAGTCTCCTCTGAAATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCAGAGCTATCCGTGCTATATACTATAGTCTCCTCTGAAATCTCT  250

seq1  GCAAATAAAAGCATCATTTCAGAGTGGATTCTCACTCTCATCTACCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAAAAGCATCATTTCAGAGTGGATTCTCACTCTCATCTACCCTTT  300

seq1  CATCCTTGGTTTTAACCCAAATGCCACTTTTCAAATACATTCACAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGGTTTTAACCCAAATGCCACTTTTCAAATACATTCACAATATA  350

seq1  TGTCTCAAATTTGTTTTTGAAATGGCCTCTGCCTGTGTTCAGTTGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAATTTGTTTTTGAAATGGCCTCTGCCTGTGTTCAGTTGAGACA  400

seq1  TACAGAAACACATTCAAAATAAAACAGAAAGATCACTGCTACAGAGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAACACATTCAAAATAAAACAGAAAGATCACTGCTACAGAGGTAG  450

seq1  AGAACTCTATAAAAATAGCAAGAAGAAAAAAATCAAATGGAGAAATCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTATAAAAATAGCAAGAAGAAAAAAATCAAATGGAGAAATCTAG  500

seq1  AGGAAAAGATACTGAAGGTTCGATGCGGGAAGATACAACATCAGAGATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGATACTGAAGGTTCGATGCGGGAAGATACAACATCAGAGATTA  550

seq1  TTCTCACAGGCTACATTCCCTTTTTTCCTGAACATGAGGGAAATTTGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAGGCTACATTCCCTTTTTTCCTGAACATGAGGGAAATTTGAAT  600

seq1  AAAAGGAGAATGAGAAGGGCATGGAGCTCACAGGCTAGGTGTCTGAACGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAATGAGAAGGGCATGGAGCTCACAGGCTAGGTGTCTGAACGA  650

seq1  AATAACAGATGGTATAATGTTCCAGGGAAGAGGATTGGAGGTATAAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGATGGTATAATGTTCCAGGGAAGAGGATTGGAGGTATAAATAG  700

seq1  AAAGATCTGTGGCTATAACACTTTTTCTCAATGGCATTCTATCAGAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTGTGGCTATAACACTTTTTCTCAATGGCATTCTATCAGAGAAA  750

seq1  CCTGAGATTAGATTTTTACTGTTACTTCTGTGGATAAGAATTAAACAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATTAGATTTTTACTGTTACTTCTGTGGATAAGAATTAAACAATA  800

seq1  GTAAAGATACTCCCAGGCCAAAAAAAATAAAAAAATTAAAAAATAAGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATACTCCCAGGCCAAAAAAAATAAAAAAATTAAAAAATAAGGGC  850

seq1  AGGGACTACACATTGAATTTCTTACATTTTATAATAAAGTAATTGAACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTACACATTGAATTTCTTACATTTTATAATAAAGTAATTGAACTC  900

seq1  AATTATTTCTGGGTTGTCTATAACACAAGAGATACATGAAGCATATTTCA  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATTATTTCTGGGTTGTCTAT-ACACAAGAGATACATGAAGCATATTTCA  949

seq1  ATTTCAAAGCGTGTTTTCTATATAATAACTAATTAAACCAAGGTTATGTG  1000
      ||||||||||||||||||||||||   |||||||||||||||  ||||||
seq2  ATTTCAAAGCGTGTTTTCTATATA--TACTAATTAAACCAAG--TATGTG  995

seq1  TTACCTGTCTTTTCTGTTCATTTATTTTTGTAAACAG-ACAAATATGTGC  1049
       |||||||||||||||||||||||||||||| ||||| |||||| |||||
seq2  -TACCTGTCTTTTCTGTTCATTTATTTTTGT-AACAGAACAAATTTGTGC  1043

seq1  ACAGGGAAAAATGGAAA-TTGGAGAGGACAAAGTGATAAAATGTGGGTTT  1098
      |||||  |||||||||| ||||||||||| || ||||  |||||||  ||
seq2  ACAGG--AAAATGGAAATTTGGAGAGGAC-AACTGAT--AATGTGG--TT  1086

seq1  AGTGGGAGAGAAAAGATAAAAATAGAAATACTATCACCCTTTAGGATAA  1147
      | |||  |||||||||||||||| ||||| |||||||||||||| ||||
seq2  ATTGG--GAGAAAAGATAAAAAT-GAAAT-CTATCACCCTTTAGAATAA  1131

seq1: chr6_76215536_76216074
seq2: B6Ng01-094P18.g_70_608 (reverse)

seq1  CCTTGAATTTGTGGATTTTATATAGTATTTTACTTCCTGCTTATTTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAATTTGTGGATTTTATATAGTATTTTACTTCCTGCTTATTTTTAC  50

seq1  CTTTAATCCATTGTGGTCAGAGTGGCGACAAGAAGCTATAGATATTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCATTGTGGTCAGAGTGGCGACAAGAAGCTATAGATATTCTCT  100

seq1  AAACATTAATTTAATTTAATGTATGAATACTATTCTTGGTTATCAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAATTTAATTTAATGTATGAATACTATTCTTGGTTATCAACTTT  150

seq1  ATGATATTTGTAATGAACTCTAATCCAGATACAGAGTGTACAATTTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTTGTAATGAACTCTAATCCAGATACAGAGTGTACAATTTTGAG  200

seq1  AAATTTTCTTCCTGGTTTGATGTAGGCAAGTCCACTTGAAGTCCATAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTTCCTGGTTTGATGTAGGCAAGTCCACTTGAAGTCCATAGTT  250

seq1  TTGAGGTTGGACAAAATCTTCTTATCCAGAACTGAAAGTCATAATACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTGGACAAAATCTTCTTATCCAGAACTGAAAGTCATAATACACA  300

seq1  CCTTTAACCTGAGCCACACTTCCTACTGGCAACATATATAAAAACATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAACCTGAGCCACACTTCCTACTGGCAACATATATAAAAACATGGA  350

seq1  GGAAGGAAGATTTCACTACTCTGCCTGTTTGTCCTTGTTTTGCATACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGATTTCACTACTCTGCCTGTTTGTCCTTGTTTTGCATACATT  400

seq1  CCTTCACTGGCATGGCAGCCTACATCTTCAGGATTCCAGCATATACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTGGCATGGCAGCCTACATCTTCAGGATTCCAGCATATACAGAA  450

seq1  ACCTAGCCTTGTGGCAATTCACACACACACACACACACACACACACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCTTGTGGCAATTCACACACACACACACACACACACACACACAT  500

seq1  AAAAGGGTGAGGATGGGGGATGAGAGAGAAAGAGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGTGAGGATGGGGGATGAGAGAGAAAGAGAATTC  539