BAC Information

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BAC

Clone NameB6Ng01-095G09
Chromosome6 (Build37)
Map Location 132,802,747 - 132,804,118
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123
Downstream geneTas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095G09.bB6Ng01-095G09.g
ACCDH906353DH906354
length1,2721,038
definitionDH906353|Mus musculus domesticus DNA, BAC clone: B6Ng01-095G09, 5' end.DH906354|Mus musculus domesticus DNA, BAC clone: B6Ng01-095G09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctgaagaataccaaatgcgattagaagcccctaaaaaaaa
aaaagttcaacatccttaatcatcagggaaatgcaaatcaaagcaacact
gagattccacctcacaccagtcagaatggctaaactaaaaaattcaggtg
acaacagatcctggtgatgatgtggagatagaggtattgccctccattgt
tagtgggattgcaagctggtacaaccactctgaaaatccatctggcggtt
cctcagaaaattggacatagtgctactggaagatccaacaacactactcc
tgggtatatacccagaagatgctccaagttgtaataaggacacatgctcc
actatgttcaaagcagcattatttataatagccagaatctggaaagaacc
cagatgtccctcaacagaggaatggatacagaaaatgtgttatatttgca
cagtgaggtacttctccgctattaaaaacaatgaagtcaagaaatcttag
acagatggatagatctggaggatatcatactaagtgagataacccaataa
caaaagaacacacatgatatgcactcactgatgagcaaatattatccctg
aatctcagaatacccaagatacaatttgcacatcacatgaaactcaagaa
gaagaaagaccaaagtgtggacacatcaatccttcttagaaggaggaaca
aaatatccatgaaaagagttacagagacaaatttcaaagcagagactgaa
ggtatgaccatccagaaactgccccaccttggggtctatcccatacccag
acaatattgtgaattccaacaaatgcttgctgacaggagcctgatatagc
tgtctccagagaggctctgtcattgcctgcacgcgtttaatcccagcact
tggaatgcagaggcaagtggatttctgagtttgaggacagcctgtctaca
aagtgagctccaggacagtcaggctatgcagagaacactattttgaaaaa
caaacaaacaacaacaaacaacaacacggagtgatgcccacgacatccat
tagatgagcacaggtctcattgaggagttaaggaatacccagcagctgac
ttaggttgcagcccctgaagaacatattgactacaggtaatcgcacgctc
atgggagataccacaatcaagaaacattggaatgactatgacctacgcca
ttgtacaagggtgtgcctattgatttcattggagagatagtgtccttgtt
ccgtggaagagtcctatcttca
gaattctttttagtggtttccagagtgactgcatccattagaatttctct
aaatttaaacaagcatcctcgtccaccatactcccccaccatttggtttt
aattataagaattacagcaagtacttagcattagtgaggcagcagattct
gtctccagcactactacaagaatagttcaatagcaggaagacagacttgt
tccagtaaatctgagaaaggtatgacataaagtagtggacaattatagaa
ggcacaagcttaatgttttcagttgttgcactattttgattatctgctac
tgtatctacttacccatcttatcagattggaaagtctactttgtccccaa
aatttatattcacatgtaaatttcttaaatatccagagaccaaagggaat
tatcaataaatttaatagtaccttttttatgatttttcttaaactacagt
gtcaatgacctagagtctaataggttttgattatgagatagtaggtaatt
tattatagatatgtagatttaaataaagaacattttaaagtgagctatga
ttagcttaaaatttttaattattttatttagatttaatcattgtatgaaa
cttatgaatgaataattgagtaagacatgcaggtacctcatcaacacaca
cacacacacacacacacacacacacacacacacacacacatatatatata
tatatatatatatatatatatatatatatatatatatatataacattttt
tttttactgaaaattgtctgtctgaaaaaggtatttcgtccactctcaca
taaccataagaaactatcttcttataggacctttctttaggtaaacttta
tgtggctatacccgttcagaatcagatacagtgaggtctcaggagttctt
cttgctcagtgtgcctcatacatacttgtgtatagaatccagcatatgta
tctcacatatcacttcgaacctcggagaagatggtattttcttttgtctt
tttcaaatgtatttgtttagatggaacatgtagaccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132802747_132804118
seq2: B6Ng01-095G09.g_70_1107

seq1  GAATTCTTTTTAGTGGTTTCCAGAGTGACTGCATCCATTAGAATTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTAGTGGTTTCCAGAGTGACTGCATCCATTAGAATTTCTCT  50

seq1  AAATTTAAACAAGCATCCTCGTCCACCATACTCCCCCACCATTTGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAACAAGCATCCTCGTCCACCATACTCCCCCACCATTTGGTTTT  100

seq1  AATTATAAGAATTACAGCAAGTACTTAGCATTAGTGAGGCAGCAGATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGAATTACAGCAAGTACTTAGCATTAGTGAGGCAGCAGATTCT  150

seq1  GTCTCCAGCACTACTACAAGAATAGTTCAATAGCAGGAAGACAGACTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGCACTACTACAAGAATAGTTCAATAGCAGGAAGACAGACTTGT  200

seq1  TCCAGTAAATCTGAGAAAGGTATGACATAAAGTAGTGGACAATTATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAAATCTGAGAAAGGTATGACATAAAGTAGTGGACAATTATAGAA  250

seq1  GGCACAAGCTTAATGTTTTCAGTTGTTGCACTATTTTGATTATCTGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGCTTAATGTTTTCAGTTGTTGCACTATTTTGATTATCTGCTAC  300

seq1  TGTATCTACTTACCCATCTTATCAGATTGGAAAGTCTACTTTGTCCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTACTTACCCATCTTATCAGATTGGAAAGTCTACTTTGTCCCCAA  350

seq1  AATTTATATTCACATGTAAATTTCTTAAATATCCAGAGACCAAAGGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATTCACATGTAAATTTCTTAAATATCCAGAGACCAAAGGGAAT  400

seq1  TATCAATAAATTTAATAGTACCTTTTTTATGATTTTTCTTAAACTACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATAAATTTAATAGTACCTTTTTTATGATTTTTCTTAAACTACAGT  450

seq1  GTCAATGACCTAGAGTCTAATAGGTTTTGATTATGAGATAGTAGGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGACCTAGAGTCTAATAGGTTTTGATTATGAGATAGTAGGTAATT  500

seq1  TATTATAGATATGTAGATTTAAATAAAGAACATTTTAAAGTGAGCTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAGATATGTAGATTTAAATAAAGAACATTTTAAAGTGAGCTATGA  550

seq1  TTAGCTTAAAATTTTTAATTATTTTATTTAGATTTAATCATTGTATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTAAAATTTTTAATTATTTTATTTAGATTTAATCATTGTATGAAA  600

seq1  CTTATGAATGAATAATTGAGTAAGACATGCAGGTACCTCATCAACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGAATGAATAATTGAGTAAGACATGCAGGTACCTCATCAACACACA  650

seq1  CACACACACACACACACACACACACACACACACACACACATATATATATA  700
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CACACACACACACACACACACACACACACACACACACAC--ATATATATA  698

seq1  TATATATATATATATATATATATATATATATATATATATATATAACATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATATAACATTT  748

seq1  ATTTTTGACTGAGAATATGTCTGTCTGAGAAAATGTAATTCTTCACACTC  800
       ||||| ||||| ||| ||||||||||| |||| ||| ||| || |||||
seq2  TTTTTTTACTGAAAAT-TGTCTGTCTGA-AAAAGGTATTTCGTC-CACTC  795

seq1  TCACATAACCATAAAGAAAACTATCTTCTTATAGGGACCTTTCTTTAGGT  850
      ||||||||||||||   |||||||||||||||| ||||||||||||||||
seq2  TCACATAACCATAA--GAAACTATCTTCTTATA-GGACCTTTCTTTAGGT  842

seq1  TAAAACTTTATGTGGCTATATCCAGTTCAGAATCAGAATACAGTGATGGT  900
        |||||||||||||||||| || |||||||||||| ||||||||| |||
seq2  --AAACTTTATGTGGCTATA-CCCGTTCAGAATCAG-ATACAGTGA-GGT  887

seq1  CTCAGGGAGTTCTTTCTTGCTCAGTGTGCCTTCAATACATACTTGTGTAT  950
      |||| ||||||| ||||||||||||||||||   ||||||||||||||||
seq2  CTCA-GGAGTTC-TTCTTGCTCAGTGTGCCT--CATACATACTTGTGTAT  933

seq1  AGAAGTCCAGGCATATGTCATCTCAACATATACACTACAGAACCTCTGCA  1000
      |||| |||| |||||||| ||||| |||||| |||| | ||||||| | |
seq2  AGAA-TCCA-GCATATGT-ATCTC-ACATAT-CACTTC-GAACCTC-GGA  976

seq1  GTAGGATTGTTTATATTTCTTTTTGTCTTTTTTCCAGAGTTGAATTTTGG  1050
      | | ||| |    |||||  ||||||||||||  || |  || |||    
seq2  G-AAGATGG----TATTTTCTTTTGTCTTTTT--CAAA--TGTATT----  1013

seq1  TATATAGATGGAGCACAGTTAGAGCCAGCCTCTTGCTTTTACACAGATAG  1100
      | | ||||||||  |||  |||| ||||                      
seq2  TGTTTAGATGGA--ACATGTAGA-CCAG----------------------  1038

seq1  AAATTGTATATATCTAACTTTTAGTAATTTGTGATATGTGCCCATTGTTT  1150
                                                        
seq2  --------------------------------------------------  1038

seq1  CCCAGTTATACTGTCTCCATGTTTCTTTCCCTTGAATGAAGGGAAAATAA  1200
                                                        
seq2  --------------------------------------------------  1038

seq1  TATCATATATTTCTTTATATATCTCTTACCTAGGCACAGCTGTGGTGTTA  1250
                                                        
seq2  --------------------------------------------------  1038

seq1  AGTATAGCAAATAATTTAGTCCTCATACTCTCTCTCTCTCTCTCTCTCTC  1300
                                                        
seq2  --------------------------------------------------  1038

seq1  GCTCTCTCTCTCTCTCTTGGCAGGGTTTCTCTGTATAGCCCTGGCTGTCC  1350
                                                        
seq2  --------------------------------------------------  1038

seq1  TGGAACTCACTTTGTAGACCAG  1372
                            
seq2  ----------------------  1038