BAC Information

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BAC

Clone NameB6Ng01-095K19
Chromosome6 (Build37)
Map Location 129,182,904 - 129,273,498
singlet/doubletdoublet
Overlap geneCd69, 4922502D21Rik
Upstream geneTead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d
Downstream geneClec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095K19.bB6Ng01-095K19.g
ACCDH906548DH906549
length1,1631,152
definitionDH906548|Mus musculus domesticus DNA, BAC clone: B6Ng01-095K19, 5' end.DH906549|Mus musculus domesticus DNA, BAC clone: B6Ng01-095K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,272,326 - 129,273,498)(129,182,904 - 129,184,095)
sequence
gaattcatacgtgaaagttatgacagacctgtattgaaaagcatgaaaat
atgttccaggaaacgccagttatactctcccctgtacctcctctaaatgt
tttaatcattgacttactgattttcattaccaacatacacagaggaattt
catccctctgtgaatggttatggtgttttctttcttcctttctaggagca
tagagtcccaggccatgctgctttttagaggagtggagtcacacagcacc
tccctatctgtgtctggaggttaaatgttgatggctagcaaaagaacagc
aagagtttgcatgggttcctctccacagagcacatttgaatcgtgatcac
caaagtttagattcattcactatacaaggctgcgctgggtctcataaaag
tcatccctttgttttcttccaggcatgagatccaagatcatggtcagtgt
gccttcgtgcatcaaaagggcatagacagtaccagttgtgaggatcaaaa
agaatttatttgtaccagagaaggccagtgcccttgaagatttcttccat
ccaaaggaacacgaagagcagtgtctcgttttgtctgtgatgtgtattcc
tttccatcgacatcactttaagtctaatttgactgacaaacatgtacatg
aatgttatcttcattgaaatagtgactacaaagcctaacaattaaaccaa
gcttggcgtggtactgctgcatcatcgaggttggtgcatttgaaagctat
ggccatgaagggccttgctcagaagtgatccatctcagtggagcacacga
gagggcataaagaataaagaggaaaatccctctgcttgtccaaaattcag
tgacatcttccagaagaaaaacaagagctgcaggacaggttgagcacaaa
aaatgctttgtttgccctcaaataatacatgattcacgttgaactgtgaa
ggaaggcaaaatggggagaaactatgtgactgaagtcccagtgtcaccag
tgaggccaggcaactcgccacaggtctctgcaaactgaaagactgagtaa
cctgatttgctgttgcatagttgctgaaagagtaaaggaacaaaattcct
gatgagtcggtatgaacagaacgtgagcaccggagtgagaggaacatgag
aaaagaagctttg
gaattcagctgccacaggaggaagtgtctctgatcacaggactataagca
gaactgcaaagcctgcagcataggacagatttgcaagacagctcatcagg
aagctgtgctaacacgcattttgttagtcaaatatgggcagaggcgtatc
taggcggtttttactggaaagtaccgaccttaagcagaaatcaggaacta
acagccgcaagtattggcagcagtgtctggaacgttaagccagggctgtt
taaccatgtcaggtggtcctacatcaatgacaattaaggtcgtgttggtt
atgtctagttgttttcatatttctttataaggtattatttttttccattt
tttattaggtatttagctcatttacatttccaatgctataccaaaagtcc
cccatacccacccacccccactcccctacccacccactccccctttttgg
ccctggcgttcccctttttataaggtattattatttgctactttttgttt
tgttatagaagaggataacataactgccaaataaaattgcccttgtaatg
aaatcagcaccatggccatcttcagccctgtattagagtcatgaatttgg
accacaggttgttacagcagcagcatatttttctaagtatatacctaaaa
tttattctttgaacatgtcatatataagacacaatgtagtgtattccctc
caactctcctatttctgtctcttatgccttgccagttgcccattttcctc
agaactgcacctctgaagaccctcctcctggcgccactgctgttgttagt
tcctcagctagaggtgggacctcgggtatccctctcccatcaatccccag
gtttttcctcaattacgtttgattcccctccccagacaccttagcagctt
tctctatattttgatctctgaagacaaagttgatctcagtcacctctgct
gaccacatgcagtgttctgagcagactccatgagcgcacttcaacaaact
tgtgaagatgtcagagtattgtactctgtccttggcttgtcatcctcgaa
ccacccgagttccacttggacccattattctctagggtccctttttacac
tataacgtagcattcgcatctggtctcaccacttggcccatcttacacaa
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129272326_129273498
seq2: B6Ng01-095K19.b_52_1214 (reverse)

seq1  CAAAGCTTCTTTTCTTCATGTTCCTCTCTACTTCCGGGTGCTCACGTTCT  50
      |||||||||||||| ||||||||||||| |||  | ||||||||||||||
seq2  CAAAGCTTCTTTTC-TCATGTTCCTCTC-ACT--CCGGTGCTCACGTTCT  46

seq1  GTTCATACCGACTCATCACGAAATTTGTGTCCTTTACTCTTTCAGCAACT  100
      |||||||||||||||||| ||| ||||| |||||||||||||||||||||
seq2  GTTCATACCGACTCATCAGGAATTTTGT-TCCTTTACTCTTTCAGCAACT  95

seq1  ATGGCAACAGCAAATCCAGGTTACCTCAAGTCTTTCAGTTTGGCAGAGAC  150
      || |||||||||||| ||||||| ||| ||||||||||||| ||||||||
seq2  AT-GCAACAGCAAAT-CAGGTTA-CTC-AGTCTTTCAGTTT-GCAGAGAC  140

seq1  CTGTGGCGAGTTGCCTGGCCCTCACTGGTGACACTGGGACTTCAGTCACA  200
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  CTGTGGCGAGTTGCCTGG-CCTCACTGGTGACACTGGGACTTCAGTCAC-  188

seq1  ATAGTTTCTCCCC-TTTTGCCTTCCTTCACAGTTCAACGTGAATCATGTA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTCTCCCCATTTTGCCTTCCTTCACAGTTCAACGTGAATCATGTA  238

seq1  TTATTTGAGGGCAAACAAAGCATTTTTTGTGCTCACCCTGTCCTGCAGCT  299
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTATTTGAGGGCAAACAAAGCATTTTTTGTGCTCAACCTGTCCTGCAGCT  288

seq1  CTTGTTTTTCTTCTGGAAGATGTCACTGAATTTTGGACAAGCAGAGGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTCTTCTGGAAGATGTCACTGAATTTTGGACAAGCAGAGGGAT  338

seq1  TTTCCTCTTTATTCTTTATGCCCTCTCGTGTGCTCCACTGAGATGGATCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTATTCTTTATGCCCTCTCGTGTGCTCCACTGAGATGGATCA  388

seq1  CTTCTGAGCAAGGCCCTTCATGGCCATAGC-TTCAAATGCACCAACCTCG  448
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTCTGAGCAAGGCCCTTCATGGCCATAGCTTTCAAATGCACCAACCTCG  438

seq1  ATGATGCAGCAGTACCACGCCAAGCTTGGTTTAATTGTTAGGCTTTGTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCAGCAGTACCACGCCAAGCTTGGTTTAATTGTTAGGCTTTGTAG  488

seq1  TCACTATTTCAATGAAGATAACATTCATGTACATGTTTGTCAGTCAAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTTCAATGAAGATAACATTCATGTACATGTTTGTCAGTCAAATT  538

seq1  AGACTTAAAGTGATGTCGATGGAAAGGAATACACATCACAGACAAAACGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAAAGTGATGTCGATGGAAAGGAATACACATCACAGACAAAACGA  588

seq1  GACACTGCTCTTCGTGTTCCTTTGGATGGAAGAAATCTTCAAGGGCACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGCTCTTCGTGTTCCTTTGGATGGAAGAAATCTTCAAGGGCACTG  638

seq1  GCCTTCTCTGGTACAAATAAATTCTTTTTGATCCTCACAACTGGTACTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTCTGGTACAAATAAATTCTTTTTGATCCTCACAACTGGTACTGT  688

seq1  CTATGCCCTTTTGATGCACGAAGGCACACTGACCATGATCTTGGATCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCCTTTTGATGCACGAAGGCACACTGACCATGATCTTGGATCTCA  738

seq1  TGCCTGGAAGAAAACAAAGGGATGACTTTTATGAGACCCAGCGCAGCCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGAAGAAAACAAAGGGATGACTTTTATGAGACCCAGCGCAGCCTT  788

seq1  GTATAGTGAATGAATCTAAACTTTGGTGATCACGATTCAAATGTGCTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGAATGAATCTAAACTTTGGTGATCACGATTCAAATGTGCTCTG  838

seq1  TGGAGAGGAACCCATGCAAACTCTTGCTGTTCTTTTGCTAGCCATCAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGAACCCATGCAAACTCTTGCTGTTCTTTTGCTAGCCATCAACA  888

seq1  TTTAACCTCCAGACACAGATAGGGAGGTGCTGTGTGACTCCACTCCTCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCTCCAGACACAGATAGGGAGGTGCTGTGTGACTCCACTCCTCTA  938

seq1  AAAAGCAGCATGGCCTGGGACTCTATGCTCCTAGAAAGGAAGAAAGAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGCATGGCCTGGGACTCTATGCTCCTAGAAAGGAAGAAAGAAAA  988

seq1  CACCATAACCATTCACAGAGGGATGAAATTCCTCTGTGTATGTTGGTAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATAACCATTCACAGAGGGATGAAATTCCTCTGTGTATGTTGGTAAT  1038

seq1  GAAAATCAGTAAGTCAATGATTAAAACATTTAGAGGAGGTACAGGGGAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAGTAAGTCAATGATTAAAACATTTAGAGGAGGTACAGGGGAGA  1088

seq1  GTATAACTGGCGTTTCCTGGAACATATTTTCATGCTTTTCAATACAGGTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACTGGCGTTTCCTGGAACATATTTTCATGCTTTTCAATACAGGTC  1138

seq1  TGTCATAACTTTCACGTATGAATTC  1173
      |||||||||||||||||||||||||
seq2  TGTCATAACTTTCACGTATGAATTC  1163

seq1: chr6_129182904_129184095
seq2: B6Ng01-095K19.g_68_1219

seq1  GAATTCAGCTGCCACAGGAGGAAGTGTCTCTGATCACAGGACTATAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGCCACAGGAGGAAGTGTCTCTGATCACAGGACTATAAGCA  50

seq1  GAACTGCAAAGCCTGCAGCATAGGACAGATTTGCAAGACAGCTCATCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAAAGCCTGCAGCATAGGACAGATTTGCAAGACAGCTCATCAGG  100

seq1  AAGCTGTGCTAACACGCATTTTGTTAGTCAAATATGGGCAGAGGCGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGCTAACACGCATTTTGTTAGTCAAATATGGGCAGAGGCGTATC  150

seq1  TAGGCGGTTTTTACTGGAAAGTACCGACCTTAAGCAGAAATCAGGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGGTTTTTACTGGAAAGTACCGACCTTAAGCAGAAATCAGGAACTA  200

seq1  ACAGCCGCAAGTATTGGCAGCAGTGTCTGGAACGTTAAGCCAGGGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGCAAGTATTGGCAGCAGTGTCTGGAACGTTAAGCCAGGGCTGTT  250

seq1  TAACCATGTCAGGTGGTCCTACATCAATGACAATTAAGGTCGTGTTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATGTCAGGTGGTCCTACATCAATGACAATTAAGGTCGTGTTGGTT  300

seq1  ATGTCTAGTTGTTTTCATATTTCTTTATAAGGTATTATTTTTTTCCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGTTGTTTTCATATTTCTTTATAAGGTATTATTTTTTTCCATTT  350

seq1  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  400

seq1  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGG  450

seq1  CCCTGGCGTTCCCCTTTTTATAAGGTATTATTATTTGCTACTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCGTTCCCCTTTTTATAAGGTATTATTATTTGCTACTTTTTGTTT  500

seq1  TGTTATAGAAGAGGATAACATAACTGCCAAATAAAATTGCCCTTGTAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGAAGAGGATAACATAACTGCCAAATAAAATTGCCCTTGTAATG  550

seq1  AAATCAGCACCATGGCCATCTTCAGCCCTGTATTAGAGTCATGAATTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCACCATGGCCATCTTCAGCCCTGTATTAGAGTCATGAATTTGG  600

seq1  ACCACAGGTTGTTACAGCAGCAGCATATTTTTCTAAGTATATACCTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGTTGTTACAGCAGCAGCATATTTTTCTAAGTATATACCTAAAA  650

seq1  TTTATTCTTTGAACATGTCATATATAAGACACAATGTAGTGTATTCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTTGAACATGTCATATATAAGACACAATGTAGTGTATTCCCTC  700

seq1  CAACTCTCCTATTTCTGTCTCTTATGCCTTGCCAGTTGCCCATTTTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCCTATTTCTGTCTCTTATGCCTTGCCAGTTGCCCATTTTCCTC  750

seq1  AGAACTGCACCTCTGAAGACCCTCCTCCTGGCGCCACTGCTGTTGTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCACCTCTGAAGACCCTCCTCCTGGCGCCACTGCTGTTGTTAGT  800

seq1  TCCTCAGCTAGAGGTGGGACCTCGGGTATCCCTCTCCCATCCAATCCCCA  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCTCAGCTAGAGGTGGGACCTCGGGTATCCCTCTCCCAT-CAATCCCCA  849

seq1  GGTTTTTCCTCAATTACGTTTGATTTCCCCTCCCCCAGACACCTTAGCAG  900
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GGTTTTTCCTCAATTACGTTTGA-TTCCCCT-CCCCAGACACCTTAGCAG  897

seq1  CTTTCTCTATATTTTGATCTCTGAAGGACAAAGTTGATCTCCAGTCACCC  950
      ||||||||||||||||||||||||| |||||||||||||| |||||| ||
seq2  CTTTCTCTATATTTTGATCTCTGAA-GACAAAGTTGATCT-CAGTCA-CC  944

seq1  TCTGCTGACCACATGCAAGTGTTCTGAGCAGACCCCCAATGAGGCGCACC  1000
      |||||||||||||||| |||||||||||||||| ||  |||| ||||| |
seq2  TCTGCTGACCACATGC-AGTGTTCTGAGCAGACTCC--ATGA-GCGCA-C  989

seq1  TTCAACAAACCTGTGAAGAGTGTCAGAAGTAATTGTACCTCTGGTCTCTG  1050
      |||||||||| |||||||| |||||| ||| |||||| |||| |||  ||
seq2  TTCAACAAACTTGTGAAGA-TGTCAG-AGT-ATTGTA-CTCT-GTCCTTG  1034

seq1  GCTTCGTTCCCATCCTCGACACACCCGAGTTCCCACCTTGGAACCCATTA  1100
      |||| ||   |||||||||  ||||||||||||   ||||| ||||||||
seq2  GCTT-GT---CATCCTCGAACCACCCGAGTTCC--ACTTGG-ACCCATTA  1077

seq1  TTCTCT-GGGTCCCCCTTTTCACCAAAATTACAAACATTAGCATTTCCCC  1149
      |||||| |||||||  ||| ||| | ||          |||||||  | |
seq2  TTCTCTAGGGTCCCTTTTTACACTATAA--------CGTAGCATT--CGC  1117

seq1  ATCT-GTCTCCACCCAACCTTGGCCCACAATCTCTTACACAACA  1192
      |||| |||| ||||    |||||||||     ||||||||||||
seq2  ATCTGGTCT-CACC---ACTTGGCCCA-----TCTTACACAACA  1152