BAC Information

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BAC

Clone NameB6Ng01-095N19
Chromosome6 (Build37)
Map Location 86,870,865 - 86,871,746
singlet/doubletsinglet
Overlap geneAak1
Upstream geneTprkb, EG434057, LOC665213, Dusp11, Figla, Add2, Tgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1, 2610209M04Rik, Gmcl1, Anxa4, 2610306M01Rik
Downstream geneLOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1, Gkn1, Gkn2, 1190003M12Rik, Bmp10, Arhgap25, Prokr1, 2010301N04Rik, 1810020O05Rik, AB041550, LOC100043118, EG545864, Gp9, Rab43, Isy1, Cnbp, Copg, 8430410A17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095N19.bB6Ng01-095N19.g
ACCDH906685DH906686
length1,211884
definitionDH906685|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N19, 5' end.DH906686|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccccctttctgtcgctcattagaaaacaaacaggcttctaagg
gaatatatgatatatgatataacaaaacctaacacatcagaataggacaa
aacaaacaaggaaaagagttcaagaaatgcatataagtgcagagacacac
ttgttcacatatgcaagagtcccgtgaaaatacaaagctggaatgttgcg
gtaaatctccaatccaaatatgcctcagcaatgaaaacacaacacagtta
atatgaatacatatgtgcacctagtttggacagatctaccgctacacgac
catcttccacatctatgagaccccttagagcttgcagtttctccaggcca
tgtgcttctgctccgcttttcttcttcctcctcctcctccgcgtcctctc
cttcatccattttctccttcttctttctccaccttccattccaccttccc
ttttatctgcccaatcatcagctctcctttattttacaaattaaggtggg
aagcaggtttacaggaaatcacctgagcgctgactcattccttgttcaaa
accacacacaggaaaacggaattaacataaaatataattagccccagggc
tatcgacaacactggaagccataatatatatgaaaagggacctacagggc
aaagcggggagggagggatgaagaaagggaaagagagaaaaattgtaaaa
tatatgtatacataaaataaaaaacaaaaacaatgtaatgtaaacaaaaa
tgtgtaattaaataaatatacaaacccaaagtcctagcttaacattatgt
gaccagggaccttcaaagatgccagtgagctgggttcttttgttgaccat
tctacagctgggacacggtggcctacacttaaggaatagtttggtctcca
cggcgagatggctccatggggtaagcgcactgactgctcttcccaagggt
cctgagttcaattcccagcaacacgtggtgctcacacactgtatgagatc
tgagctctctgtgcatctgagtcaggctacactgtactatgtagataatt
agtaaacgttgggtcggaacagcagactgagtgacagagtgacgacgatg
gcgacgatggacaagtcctaaattcattccagaccatgagctcaacactg
tacggtcagtatcccatctattaatcctaacgataggtggttcccacagg
gtggagagatc
gaattcagtattgaattttcactatgtggtaagcattgttttaaggtgag
atgatctggtgggtggaggaaccgaccacatagacacagtactaaactca
caatgagttacaaatagtaacttctgttctggtcaaaaattaaaaacgaa
agtggctgccaggcagtggtggtacaagcctttaatcccagtactgggga
aacagaggcacatgggtctctgtgagtttaaggccagcatggtctaaaga
gcaagttccaagaaagccagggctacacagagaaaccctgtctcaaaaac
aaacaaaccaataacaaacaaacaaacaaaaaaccaaaactgggtgttat
atttcacacatataaaccccagaactcagaaggctgaggcaggaggatta
ctatgagtttgaagcctgcctgggctacaagaggaattttgggtcagact
agactagagtgagtagcctgcttcaacaaataactagaaattgaggacaa
gaaaggtacaatgttgggagatatgaaagaagtatattatatgatgtgtg
gttgtgccatagtgaaactcactcttctgtaagttaatatagattgatat
aaaaaatagaccagagtgctgtatatttgagggaaaatagaagactatat
gattctttttgtaaattacatcaatgcccacattcttaagagtttgtcaa
gtgtgacagtatgaaagttaccctcctgcctcttctgctttacttcacag
atggagccccttttccttgggaagtaagagcagcacaggccacatgcgtt
cttactctgtctgaagcatcctcagttggctttggagactgagagtggtt
cccctgatccattgggggagggggggagggggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_86870865_86871746
seq2: B6Ng01-095N19.g_67_950

seq1  GAATTCAGTATTGAATTTTCACTATGTGGTAAGCATTGTTTTAAGGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTGAATTTTCACTATGTGGTAAGCATTGTTTTAAGGTGAG  50

seq1  ATGATCTGGTGGGTGGAGGAACCGACCACATAGACACAGTACTAAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGGTGGGTGGAGGAACCGACCACATAGACACAGTACTAAACTCA  100

seq1  CAATGAGTTACAAATAGTAACTTCTGTTCTGGTCAAAAATTAAAAACGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGTTACAAATAGTAACTTCTGTTCTGGTCAAAAATTAAAAACGAA  150

seq1  AGTGGCTGCCAGGCAGTGGTGGTACAAGCCTTTAATCCCAGTACTGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGCCAGGCAGTGGTGGTACAAGCCTTTAATCCCAGTACTGGGGA  200

seq1  AACAGAGGCACATGGGTCTCTGTGAGTTTAAGGCCAGCATGGTCTAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGCACATGGGTCTCTGTGAGTTTAAGGCCAGCATGGTCTAAAGA  250

seq1  GCAAGTTCCAAGAAAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCCAAGAAAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAC  300

seq1  AAACAAACCAATAACAAACAAACAAACAAAAAACCAAAACTGGGTGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACCAATAACAAACAAACAAACAAAAAACCAAAACTGGGTGTTAT  350

seq1  ATTTCACACATATAAACCCCAGAACTCAGAAGGCTGAGGCAGGAGGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACACATATAAACCCCAGAACTCAGAAGGCTGAGGCAGGAGGATTA  400

seq1  CTATGAGTTTGAAGCCTGCCTGGGCTACAAGAGGAATTTTGGGTCAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTTGAAGCCTGCCTGGGCTACAAGAGGAATTTTGGGTCAGACT  450

seq1  AGACTAGAGTGAGTAGCCTGCTTCAACAAATAACTAGAAATTGAGGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGAGTGAGTAGCCTGCTTCAACAAATAACTAGAAATTGAGGACAA  500

seq1  GAAAGGTACAATGTTGGGAGATATGAAAGAAGTATATTATATGATGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTACAATGTTGGGAGATATGAAAGAAGTATATTATATGATGTGTG  550

seq1  GTTGTGCCATAGTGAAACTCACTCTTCTGTAAGTTAATATAGATTGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGCCATAGTGAAACTCACTCTTCTGTAAGTTAATATAGATTGATAT  600

seq1  AAAAAATAGACCAGAGTGCTGTATATTTGAGGGAAAATAGAAGACTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGACCAGAGTGCTGTATATTTGAGGGAAAATAGAAGACTATAT  650

seq1  GATTCTTTTTGTAAATTACATCAATGCCCACATTCTTAAGAGTTTGTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTTTGTAAATTACATCAATGCCCACATTCTTAAGAGTTTGTCAA  700

seq1  GTGTGACAGTATGAAAGTTACCCTCCTGCCTCTTCTGCTTTACTTCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACAGTATGAAAGTTACCCTCCTGCCTCTTCTGCTTTACTTCACAG  750

seq1  ATGGAGCCCCTTTCCCTTGGGAAGTAAGAGCAGCACAGGCCACATGCGTT  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCCCTTTTCCTTGGGAAGTAAGAGCAGCACAGGCCACATGCGTT  800

seq1  CTTACTCTGTCTGAAGCATCCTCAGTTGGCTTTGGAGACTGAGAGTTGTT  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTACTCTGTCTGAAGCATCCTCAGTTGGCTTTGGAGACTGAGAGTGGTT  850

seq1  CCCCTGATCCATTGGGG--AGGGGGGAGGGGGCC  882
      |||||||||||||||||   ||||||||||||||
seq2  CCCCTGATCCATTGGGGGAGGGGGGGAGGGGGCC  884