BAC Information

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BAC

Clone NameB6Ng01-096C24
Chromosome6 (Build37)
Map Location 82,481,583 - 82,481,907
singlet/doubletsinglet
Overlap geneTacr1
Upstream geneLOC232143, 1700009C05Rik, AW146020, Mrpl19, Tmem166, EG622198
Downstream genePole4, LOC100043412, Hk2, EG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn, Wdr54, 1700003E16Rik, Dctn1, C330016K18Rik, Mthfd2, Mobk1b, Bola3, D230004J03Rik, Dguok, Actg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096C24.g
ACCDH906920
length325
definitionDH906920|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctcagaggaaccgtattgggcgagatgtagcatcatagccatgggcagcc
attaggaaactcggaagggaggcagcttcagttccaaagggcccaagggg
atttcttgctcttataggcataggggtagagggaggaggaccatgccagc
agtcaggaagccaggaaggcaccgacggcatctagccataactcaaagcc
atcctgggtctggacagtagagagaggggcaggtcttgcttgtagtttta
agagggaaagagctcagcccttggagacctgcagggtcatagtgtgcttt
cttatcaactgtggggtgtgtgtgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_82481583_82481907
seq2: B6Ng01-096C24.g_71_395 (reverse)

seq1  ACACACACACCCCACAGTTGATAAGAAAGCACACTATGACCCTGCAGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACCCCACAGTTGATAAGAAAGCACACTATGACCCTGCAGGTC  50

seq1  TCCAAGGGCTGAGCTCTTTCCCTCTTAAAACTACAAGCAAGACCTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGCTGAGCTCTTTCCCTCTTAAAACTACAAGCAAGACCTGCCCC  100

seq1  TCTCTCTACTGTCCAGACCCAGGATGGCTTTGAGTTATGGCTAGATGCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTACTGTCCAGACCCAGGATGGCTTTGAGTTATGGCTAGATGCCG  150

seq1  TCGGTGCCTTCCTGGCTTCCTGACTGCTGGCATGGTCCTCCTCCCTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCCTTCCTGGCTTCCTGACTGCTGGCATGGTCCTCCTCCCTCTAC  200

seq1  CCCTATGCCTATAAGAGCAAGAAATCCCCTTGGGCCCTTTGGAACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGCCTATAAGAGCAAGAAATCCCCTTGGGCCCTTTGGAACTGAAG  250

seq1  CTGCCTCCCTTCCGAGTTTCCTAATGGCTGCCCATGGCTATGATGCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCTTCCGAGTTTCCTAATGGCTGCCCATGGCTATGATGCTACA  300

seq1  TCTCGCCCAATACGGTTCCTCTGAG  325
      |||||||||||||||||||||||||
seq2  TCTCGCCCAATACGGTTCCTCTGAG  325