BAC Information

Click to search

BAC

Clone NameB6Ng01-096M08
Chromosome6 (Build37)2 (Build37)
Map Location 18,835,453 - 18,835,968129,718,302 - 129,718,378
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096M08.bB6Ng01-096M08.g
ACCDH907325DH907326
length1,04534
definitionDH907325|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M08, 5' end.DH907326|Mus musculus domesticus DNA, BAC clone: B6Ng01-096M08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,453 - 18,835,968)(129,718,302 - 129,718,378)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttatggagtccaccttcttgagttctttatatatattggatattagtccc
ctgttcgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcaattctcgatcttacagcacaagccattgctgtt
ctattgaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagtaagggatcaattcgc
aatattctacatgataacagccagttgtgccagcaccatttgttgaaaat
gctgtctttttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtgggttcatctctgggtcttcaattctgttccattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtacagctttaggtcgggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatctgccgattgccctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttactatattgatcctgccaatccatgagcatgggagatctttccatct
tttgagatcttctttaatttctttcttcagagacatgaagttcttgtcat
acagatctttcacttccttagttagagtcacgcctaggtattttatatta
tttgtggctatcgagaaaggtgttgtttccctaatttctttctcagcctg
ttgtctttgtgtagagaaaggccattgacttgtttgagttaattt
caggacatctagggatataataaataaacaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835453_18835968
seq2: B6Ng01-096M08.b_46_563 (reverse)

seq1  CCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCC  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATCC  50

seq1  AGTGG-AAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  99
      ||||| || |||||||||||||||||||| |||||||||||||||||| |
seq2  AGTGGAAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  149
      |||||| ||||||| | || |||| ||||| |   ||||||| |||||||
seq2  GTTATCATGTAGAATATTGCGAATTGATCCCTTACTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  199
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  249
      |||||||||||||||||||| ||||||||||| ||||||||||| | |||
seq2  AAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGGGTACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  298
      |||||| ||||| || |||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTCAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  348
      | || ||||||||||| || ||| | ||||| ||||||||||||||||||
seq2  TTGATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  448
      |||||| |||||  | ||||||||||||||||| ||||||||||||||||
seq2  CTATCCCAAATCGAACAGGGGACTAATATCCAATATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  498
      |||||||||||| || ||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTCCATAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  516
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr2_129718302_129718378
seq2: B6Ng01-096M08.g_71_147

seq1  CAGGACATCTAGGGATATAATAAATAAACAAACAAAATTAAAAATGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACATCTAGGGATATAATAAATAAACAAACAAAATTAAAAATGAAGA  50

seq1  GGAGGAGGAGGAAGGGAGGAGGGGAAA  77
      |||||||||||||||||||||||||||
seq2  GGAGGAGGAGGAAGGGAGGAGGGGAAA  77