BAC Information

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BAC

Clone NameB6Ng01-096N08
Chromosome6 (Build37)6 (Build37)
Map Location 18,835,452 - 18,835,968107,409,662 - 107,410,784
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096N08.bB6Ng01-096N08.g
ACCDH907369DH907370
length9801,120
definitionDH907369|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N08, 5' end.DH907370|Mus musculus domesticus DNA, BAC clone: B6Ng01-096N08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(107,409,662 - 107,410,784)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tattcttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttggagtttttatcata
cagatctttcacttccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaaggtgtgtttcccta
gaattccaagcccagggtcagctcaaggactacctagggcattggtgaag
gccaggaagcaaagttcaattttgcttaggtatttggcaagccattgctt
aaagactcctataataaaatattgagagaaagcacacagatccattcgca
aggacaagttttagacgttcgttatacgggatgccacggttccaggaggc
taaatttccatgaacttttctccttgggactccatccaggtttctaggcc
tgtcatgagagtcactactggagtggatgtagcaggggagcttccacatt
tcaattgcctgttgtccccaatccagtcaagttgacaccaaatgacctgt
cacgctcatcacctagattctgtaaagagcttggttaaagtgtgtttgta
tgcttccgagggagcaggcacttcccttgtccgttctatgtttgttcagc
tttgttgctaaatgtgttaatagcaacatatgcttcctgtgacttccata
tctttttttctagacactctttgagatgttcattatatacatctgaatat
tttctcaaattctatcattcatgtatcatcattttaatagtacaggtaat
atttttagttttagttagtctgcctgacatttttagtttaattgaaatga
ctttaaaaaaaacttaaatacatcttagtatttttttctctaagagaact
taatctgaaacatcttgaggtcaaagggaagtagtactggatttaataca
tataaaaataagttgacttctgtacaatcagataacttacaatatgcttg
aatatacacattgctgccttgttttattgagttaaatgaagtaaactggg
acagatattaatgtatactgtgcagttagtataggccagacatatagtat
cccttcatttgttttctcagttagtactctgaagctcacaaaactttctg
ggttcagtgtttcttttataattatttttctaaaaggaaagttacagaga
gtctttgcctgaagttaaacgcctcagtggctatcaatgtagggcttgag
ttcatatctttatgcattcaatgcaaattttgcactgggccacagatgaa
tatttctattttgtctcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-096N08.b_49_566 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr6_107409662_107410784
seq2: B6Ng01-096N08.g_67_1186 (reverse)

seq1  TCTGAGAC-AAATAGAATATTTCATTCTGTGGCCCAGTTGGCAAAATTTG  49
      |||||||| ||||||||   |||| |||||||||||||  ||||||||| 
seq2  TCTGAGACAAAATAGAAATATTCA-TCTGTGGCCCAGT--GCAAAATTT-  46

seq1  GCATTTGAATGCATAAGGATATGAACTCAAGCCCTAACATTGATAGCCAC  99
      ||| |||||||||||| |||||||||||||||||| ||||||||||||||
seq2  GCA-TTGAATGCATAAAGATATGAACTCAAGCCCT-ACATTGATAGCCAC  94

seq1  TGA-GCGTTTAACTTCAGGCAAAGACTCTCTGTAACTTTCCTTTTAG-AA  147
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGAGGCGTTTAACTTCAGGCAAAGACTCTCTGTAACTTTCCTTTTAGAAA  144

seq1  AATAATTATAAAAGAAACACTGAACCCAGAAAGTTTTGTGAGCTTCAGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTATAAAAGAAACACTGAACCCAGAAAGTTTTGTGAGCTTCAGAG  194

seq1  TACTAACTGAGAAAACAAATGAAGGGATACTATATGTCTGGCCTATACTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTGAGAAAACAAATGAAGGGATACTATATGTCTGGCCTATACTA  244

seq1  ACTGCACAGTATACATTAATATCTGTCCCAGTTTACTTCATTTAACTCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACAGTATACATTAATATCTGTCCCAGTTTACTTCATTTAACTCAA  294

seq1  TAAAACAAGGCAGCAATGTGTATATTCAAGCATATTGTAAGTTATCTGAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAGGCAGCAATGTGTATATTCAAGCATATTGTAAGTTATCTGAT  344

seq1  TGTACAGAAGTCAACTTATTTTTATATGTATTAAATCCAGTACTACTTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGAAGTCAACTTATTTTTATATGTATTAAATCCAGTACTACTTCC  394

seq1  CTTTGACCTCAAGATGTTTCAGATTAAGTTCTCTTAGAGAAAAAAATACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCTCAAGATGTTTCAGATTAAGTTCTCTTAGAGAAAAAAATACT  444

seq1  AAGATGTATTTAAGTTTTTTTTAAAGTCATTTCAATTAAACTAAAAATGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTATTTAAGTTTTTTTTAAAGTCATTTCAATTAAACTAAAAATGT  494

seq1  CAGGCAGACTAACTAAAACTAAAAATATTACCTGTACTATTAAAATGATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGACTAACTAAAACTAAAAATATTACCTGTACTATTAAAATGATG  544

seq1  ATACATGAATGATAGAATTTGAGAAAATATTCAGATGTATATAATGAACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGAATGATAGAATTTGAGAAAATATTCAGATGTATATAATGAACA  594

seq1  TCTCAAAGAGTGTCTAGAAAAAAAGATATGGAAGTCACAGGAAGCATATG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGAGTGTCTAGAAAAAAAGATATGGAAGTCACAGGAAGCATATG  644

seq1  TTGCTATTAACACATTTAGCAACAAAGCTGAACAAACATAGAACGGACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTAACACATTTAGCAACAAAGCTGAACAAACATAGAACGGACAA  694

seq1  GGGAAGTGCCTGCTCCCTCGGAAGCATACAAACACACTTTAACCAAGCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTGCCTGCTCCCTCGGAAGCATACAAACACACTTTAACCAAGCTC  744

seq1  TTTACAGAATCTAGGTGATGAGCGTGACAGGTCATTTGGTGTCAACTTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGAATCTAGGTGATGAGCGTGACAGGTCATTTGGTGTCAACTTGA  794

seq1  CTGGATTGGGGACAACAGGCAATTGAAATGTGGAAGCTCCCCTGCTACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTGGGGACAACAGGCAATTGAAATGTGGAAGCTCCCCTGCTACAT  844

seq1  CCACTCCAGTAGTGACTCTCATGACAGGCCTAGAAACCTGGATGGAGTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCAGTAGTGACTCTCATGACAGGCCTAGAAACCTGGATGGAGTCC  894

seq1  CAAGGAGAAAAGTTCATGGAAATTTAGCCTCCTGGAACCGTGGCATCCCG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAAAAGTTCATGGAAATTTAGCCTCCTGGAACCGTGGCATCCCG  944

seq1  TATAACGAACGTCTAAAACTTGTCCTTGCGAATGGATCTGTGTGCTTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACGAACGTCTAAAACTTGTCCTTGCGAATGGATCTGTGTGCTTTCT  994

seq1  CTCAATATTTTATTATAGGAGTCTTTAAGCAATGGCTTGCCAAATACCTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATTTTATTATAGGAGTCTTTAAGCAATGGCTTGCCAAATACCTA  1044

seq1  AGCAAAATTGAACTTTGCTTCCTGGCCTTCACCAATGCCCTAGGTAGTCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTGAACTTTGCTTCCTGGCCTTCACCAATGCCCTAGGTAGTCC  1094

seq1  TTGAGCTGACCCTGGGCTTGGAATTC  1123
      ||||||||||||||||||||||||||
seq2  TTGAGCTGACCCTGGGCTTGGAATTC  1120