BAC Information

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BAC

Clone NameB6Ng01-097D05
Chromosome6 (Build37)
Map Location 119,047,063 - 119,048,136
singlet/doubletsinglet
Overlap geneCacna1c
Upstream geneGalnact2, Ret, 1700069P05Rik, Bms1, Zfp248, Zfp9, Ankrd26
Downstream geneDcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097D05.bB6Ng01-097D05.g
ACCDH907637DH907638
length1,070353
definitionDH907637|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D05, 5' end.DH907638|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctactctatgaaggggctcctctggctgtgctttgggaaaacctc
tccttcttgtcctgcgtggacaatgccatgagccccaggatgagcctgaa
cccacagctttagcaagcctgccccaccagcaactgtaggaacccctcac
tcactctgaatgcctttccattgtctaccaaatgggaacaaatgctctag
cctcagacaagtatcctccacagtcatccttccccacccttcccaacttc
tttcccatcaggccttgcgtaccccccaaactcaactaattaactgagtt
cctttaaaacccaatctttgtgccattagcacatcattgtttcctttacg
gatttggttcctgggagggttccatacctcacaggatggccctacaccag
tgaggatctagacagcgttaaggagactcaaatacagtgcatacaattgg
aactgagaattggggtggggggcatgggaataggggaactctctgtacca
ggaatatgtctacctcttatctctatcccattttgtccaaatggctaaag
ctcccaccactaatcatcccaattgtccaaataggatgcttctgtttctt
atgtaagaatttcatacatgtatataatgcagtttgaccaaatccatccc
cattccctcccccacgaacagctcccccacgcccaggataacctctcagg
aatcaaatccttaacaaaagcagactctccctgcccctaccagctgtgat
tactaacagcttctcagctaagtacaggacttcatgagcaccttctcaag
ccaggctgggattttgggcagttggatcttatgcagtgggctttcagagt
cacttggtatcaccacacagcatatgccactaattccctggtccatcagc
cctgctctctcttctacgctttcctcttttcatgatccactacacacaaa
acacacactcggggagcatttgcacacacacaaaaagagagttgaagaga
aacattttcctatcttcttcttgtccagtcttaattgagcatgcaaggta
aaagcctgagatgttatttc
tataaatataaatgtataacattgatgatgtataaaaatataacccctcc
ctcaattcgacataaagggccaattctaagagacactgtagtcataactt
tctaatgtcaaagacaaggaaacgacgttaaaagcatcaggaaaggaggg
attcatatcaataagataatcagaaggtttttttttatcagaatttagga
ggtcagaattcaatgggctgatttattaaaaatgtacatgtatagaaaca
ttactgtctcacagtcacacattaattgatactaaaaggtagaaaatgga
ggagaaactagggctaacctctgataaataatagcgcagggtgtgtgtgt
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119047063_119048136
seq2: B6Ng01-097D05.b_41_1110

seq1  GAATTCTACTCTATGAAGGGGCTCCTCTGGCTGTGCTTTGGGAAAACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTCTATGAAGGGGCTCCTCTGGCTGTGCTTTGGGAAAACCTC  50

seq1  TCCTTCTTGTCCTGCGTGGACAATGCCATGAGCCCCAGGATGAGCCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTGTCCTGCGTGGACAATGCCATGAGCCCCAGGATGAGCCTGAA  100

seq1  CCCACAGCTTTAGCAAGCCTGCCCCACCAGCAACTGTAGGAACCCCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCTTTAGCAAGCCTGCCCCACCAGCAACTGTAGGAACCCCTCAC  150

seq1  TCACTCTGAATGCCTTTCCATTGTCTACCAAATGGGAACAAATGCTCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGAATGCCTTTCCATTGTCTACCAAATGGGAACAAATGCTCTAG  200

seq1  CCTCAGACAAGTATCCTCCACAGTCATCCTTCCCCACCCTTCCCAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACAAGTATCCTCCACAGTCATCCTTCCCCACCCTTCCCAACTTC  250

seq1  TTTCCCATCAGGCCTTGCGTACCCCCCAAACTCAACTAATTAACTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATCAGGCCTTGCGTACCCCCCAAACTCAACTAATTAACTGAGTT  300

seq1  CCTTTAAAACCCAATCTTTGTGCCATTAGCACATCATTGTTTCCTTTACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAACCCAATCTTTGTGCCATTAGCACATCATTGTTTCCTTTACG  350

seq1  GATTTGGTTCCTGGGAGGGTTCCATACCTCACAGGATGGCCCTACACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTTCCTGGGAGGGTTCCATACCTCACAGGATGGCCCTACACCAG  400

seq1  TGAGGATCTAGACAGCGTTAAGGAGACTCAAATACAGTGCATACAATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATCTAGACAGCGTTAAGGAGACTCAAATACAGTGCATACAATTGG  450

seq1  AACTGAGAATTGGGGTGGGGGGCATGGGAATAGGGGAACTCTCTGTACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAATTGGGGTGGGGGGCATGGGAATAGGGGAACTCTCTGTACCA  500

seq1  GGAATATGTCTACCTCTTATCTCTATCCCATTTTGTCCAAATGGCTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGTCTACCTCTTATCTCTATCCCATTTTGTCCAAATGGCTAAAG  550

seq1  CTCCCACCACTAATCATCCCAATTGTCCAAATAGGATGCTTCTGTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCACTAATCATCCCAATTGTCCAAATAGGATGCTTCTGTTTCTT  600

seq1  ATGTAAGAATTTCATACATGTATATAATGCAGTTTGACCAAATCCATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGAATTTCATACATGTATATAATGCAGTTTGACCAAATCCATCCC  650

seq1  CATTCCCTCCCCCACGAACAGCTCCCCCACGCCCAGGATAACCTCTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTCCCCCACGAACAGCTCCCCCACGCCCAGGATAACCTCTCAGG  700

seq1  AATCAAATCCTTAACAAAAGCAGACTCTCCCTGCCCCTACCAGCTGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATCCTTAACAAAAGCAGACTCTCCCTGCCCCTACCAGCTGTGAT  750

seq1  TACTAACAGCTTCTCAGCTAAGTACAGGACTTCATGAGCACCTTCTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACAGCTTCTCAGCTAAGTACAGGACTTCATGAGCACCTTCTCAAG  800

seq1  CCAGGCTGGGATTTTGGGCAGTTGGATCTTATGCAGT-GGCTTTCAGAGT  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAGGCTGGGATTTTGGGCAGTTGGATCTTATGCAGTGGGCTTTCAGAGT  850

seq1  CACTTGGTCATCACCACACAGCATATGCCACTATTTCCCTTGGTCCATCA  899
      |||||||| |||||||||||||||||||||||| ||||| ||||||||||
seq2  CACTTGGT-ATCACCACACAGCATATGCCACTAATTCCC-TGGTCCATCA  898

seq1  GCCCTGCTCTCTCTTTCTACGCTTTCCTCTTTTCATGATCCACTACACAC  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCTCTCTC-TTCTACGCTTTCCTCTTTTCATGATCCACTACACAC  947

seq1  AAAACACACACTC-GGGAGCATTTGCACACACACAAGAAAGAGAGT--GA  996
      ||||||||||||| |||||||||||||||||||||| |||||||||   |
seq2  AAAACACACACTCGGGGAGCATTTGCACACACACAA-AAAGAGAGTTGAA  996

seq1  GAGAAACCATTTCCTATCTTCTTCCTTGCCCAGTTCTTAGTTGAGCATGC  1046
      |||||||  |||||||||||||| |||| |||| ||||| ||||||||||
seq2  GAGAAACATTTTCCTATCTTCTT-CTTGTCCAG-TCTTAATTGAGCATGC  1044

seq1  AAGGGTAAAAGCCCTGAGATGTTATTTC  1074
      || |||||||| ||||||||||||||||
seq2  AA-GGTAAAAG-CCTGAGATGTTATTTC  1070