BAC Information

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BAC

Clone NameB6Ng01-098I15
Chromosome6 (Build37)11 (Build37)
Map Location 18,835,754 - 18,836,44493,302,950 - 93,303,018
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098I15.bB6Ng01-098I15.g
ACCDH908601DH908602
length1,01894
definitionDH908601|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I15, 5' end.DH908602|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,754 - 18,836,444)(93,302,950 - 93,303,018)
sequence
gaattcattgtttttaatagttgagtagtactccattgtgtaaatgtacc
acattttctgtattcattcctctgttgagggacatttgggttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttattacaagttggaacttcttctgggtatatgctcaggagaggtattg
ctggatcttccggtagtagtatgtccaattttctgaggaactgccagact
gatttcgagtgtatcagcttgcaatcctaccaacaatctaggagtgttcc
tctttctccacattctagccagcatctgctgtcacctgaatttttaatct
tagccattctgattggtgtgaggcgaaatttcagggttgttttgatttgc
atttccctgatgattaaggttgttgaacatttttcaggtgcttctcagcc
attcagtattcctcagttgagaattgtttagcgctgtaccccatttttaa
tagggttatttgattttctagagtccatcttcttgagttcttcatatata
ttagatattagtcccctatctgatttagaattggtaaagatcctttccca
atctgttggtggcctttttgtcttattgacagtgccttttgccttacaga
agctttgcaattttatgaggtcccatttgttgatggagagaggggttcta
agccaagcccagtcaaccttcatgctagcaggtgcgctctctgttgggtc
tcaagaagacctacactcaggtcttcaaaccaactccatgtcacggagca
agatgctctgcctatgaggaaggggtccttcccatcatgccatcgctttc
ttctcagcaagaagaatgatggtcatcaaactccaccggaggacacaacc
agatgtcctgtgccattattttcagatgagtaagactcatttctcataaa
gtataaaccatcttctgatcgaccatgatgactttggtgtctcaatggta
ggagttgcattgggtcct
caagttcaataggaaaccctgtctcgaagaagaagaagaagaagaagaag
aagaagaagaaggaggaggaggaggaggaggaggaggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835754_18836444
seq2: B6Ng01-098I15.b_47_725 (reverse)

seq1  ACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACC  50
      ||||||||||||| || ||| | ||||| ||||| |||||||||| ||| 
seq2  ACAAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAAGGCACT  50

seq1  GTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTA  100
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  GTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCAA  100

seq1  TCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGA  150
      | ||||||||||||||||||||||||| || |||||| ||||||||||||
seq2  TTCTAAATCAGATAGGGGACTAATATCTAATATATATGAAGAACTCAAGA  150

seq1  AGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCAGAA  200
      || ||||||  ||||||||||||||||| ||||| ||||||||  |||  
seq2  AGATGGACTCTAGAAAATCAAATAACCCTATTAA-AAATGGGGTACAGCG  199

seq1  CTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT  250
      ||    ||| |||||||| ||||||||||| ||||||| |||||||||||
seq2  CT----AAACAATTCTCAACTGAGGAATACTGAATGGCTGAGAAGCACCT  245

seq1  GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGGAAATCAAAACAA  300
      | |||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  G-AAAAATGTTCAACAACCTTAATCATCAGGGAAATGCAAATCAAAACAA  294

seq1  CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA  350
      |||||| ||| | |||||||||| |||||||||||||||| |||||||||
seq2  CCCTGAAATTTCGCCTCACACCAATCAGAATGGCTAAGATTAAAAATTCA  344

seq1  GGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCA  400
      |||||||||||||||||||  | ||||||||||||||||||||||||  |
seq2  GGTGACAGCAGATGCTGGCTAGAATGTGGAGAAAGAGGAACACTCCTAGA  394

seq1  TTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGC  450
      |||||||| |||||||| |||  ||||      || |||||| |||||||
seq2  TTGTTGGTAGGATTGCAAGCTGATACA------CTCGAAATCAGTCTGGC  438

seq1  GGTTGCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGCATTACCT  500
       ||| |||||||||||||||||| |||||| ||| ||||||||| |||||
seq2  AGTTCCTCAGAAAATTGGACATACTACTACCGGAAGATCCAGCAATACCT  488

seq1  CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG  550
      |||||| ||||||| |||||||| |  |||||| |||| |||||||||||
seq2  CTCCTGAGCATATACCCAGAAGAAGTTCCAACTTGTAATAAGGACACATG  538

seq1  CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG  588

seq1  AACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATT  650
      |||||| ||| ||||||||||||||||| |||||||||||||||||||||
seq2  AACCCAAATGTCCCTCAACAGAGGAATGAATACAGAAAATGTGGTACATT  638

seq1  TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT  691
      ||||||||||||||||||||| |||||||||| ||||||||
seq2  TACACAATGGAGTACTACTCAACTATTAAAAACAATGAATT  679

seq1: chr11_93302950_93303018
seq2: B6Ng01-098I15.g_98_166

seq1  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGG  50

seq1  AGGAGGAGGAGGAGGAGGA  69
      |||||||||||||||||||
seq2  AGGAGGAGGAGGAGGAGGA  69