BAC Information

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BAC

Clone NameB6Ng01-098J20
Chromosome6 (Build37)14 (Build37)
Map Location 18,835,510 - 18,835,968123,976,773 - 123,977,895
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098J20.bB6Ng01-098J20.g
ACCDH908654DH908655
length4541,093
definitionDH908654|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J20, 5' end.DH908655|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,510 - 18,835,968)(123,976,773 - 123,977,895)
sequence
tttgttcagttctgagccccattttttaatggggttatttgattttctga
agtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttattgacggtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcgattctcgatcttacagcacaagccattgctgttctgttc
aggaatttttcccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcagtgtctctggttttatgtgaagttccttgatccact
tagatttgaccttagtacaaggagataagtatggatcgattcgcattctt
ctacacgataacaaccagttgtgccagcaccaattgttgaaaatgctgtc
tttc
gaattccaggatagccagggccacacagagaaaccctgtctcaaaaaaac
aaaacaaaacaaaacaagacaaaacaaaacaaaacaaaacaaaacaaaac
aaaacaaaacgtaactaagaaattctctctattttgaaagtgataaagtg
atatcacaggttatctgtggaaatactatgaatggaattgtaattgatct
aatacaactggggctgctggggctaaacagggtgttagtacatgttcttt
ccttacaaatggaatttctggtgagacttctaaaaaatttcaggattata
tttggggagggagaggctttaagcagttgttaattttgttgaagttcttt
tctattggtgagtggttttaaccagagacctggtgaaagggtcctctctg
ttctcataacttcataaagtccttgtcctctctgttgcctcaggaatccc
tagatattcttgatcatgttcaaggtttcaactcttaaaagagttgtaat
gataactgtctcctgtgcaccaaggaaaaggaaaaggctaagaataggat
gcagggtggtcagagaggatgctaggtactgatgcctatctatggagaga
tcaaaagaactggctcagcccctaagatatttagaatgtatttttggagt
tcatagtgattagttacagtcttgaggcagaagtagttttcacggctgat
tccaggttctccagcttgttcaattgttctgacaatgctttcatttgtta
ggaaagaggattctgggcacggaagtagagttcccagaggagcctcttaa
gatttttgtgatgcaactaagtagagaggcctaatgtacagatggtcatg
tagttctgagactctaagatcatcaaagatgggagaacaatgaaagactg
acactgaattgggagatcgctagaaagaagaagaaagaagaagaaagatg
aacgtaggatgaagaaagaaagaagatgatgattggagagagagatggag
aagccacatacaaactcaaagtccatactcaggcattacagaaagatcag
ctagaaatttggacagtgctcgtcaacaaagcttcagtgacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835510_18835968
seq2: B6Ng01-098J20.b_44_503 (reverse)

seq1  GAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCTT  50
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCGT  50

seq1  GTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTAAGGTCAAA  100
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  GTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAA  100

seq1  TCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTAT  150

seq1  AGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGT  200
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  AGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAAT  200

seq1  TCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAA  249
      |||||||||||||||||||||| |||||||| || | |||||||||||||
seq2  TCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAA  250

seq1  TGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAA  300

seq1  TAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTA  350

seq1  AATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTG  400

seq1  GACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAA  449
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAA  450

seq1  CAAAGAATTC  459
      ||||||||||
seq2  CAAAGAATTC  460

seq1: chr14_123976773_123977895
seq2: B6Ng01-098J20.g_67_1159 (reverse)

seq1  AGGTCACTGTAGCTTTGTTGACTGTAGCAACCTTGTTCAAATTTCTTAGC  50
      ||||||||| ||||||||||||   ||||    ||| |||||||| ||||
seq2  AGGTCACTGAAGCTTTGTTGAC--GAGCA---CTGTCCAAATTTC-TAGC  44

seq1  TGATCTTTCTGTAATTGGCCTTGAGTATTGGACTATTTGAGTTTGTTATG  100
      |||||||||||||||  ||| |||||| |||||  |||||||||| ||||
seq2  TGATCTTTCTGTAAT--GCC-TGAGTA-TGGAC--TTTGAGTTTG-TATG  87

seq1  TGGCTTTCCTTCCTTTCTCTCTCTTCCTTTCTTTCTTTCTTTCTTTCTTT  150
      ||||||  || | | ||||||   |||  || |  |    ||||||||||
seq2  TGGCTT--CTCCATCTCTCTC---TCCAATCATCAT---CTTCTTTCTTT  129

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  200
      |||    || | | |||  ||||||||   |||||||||   ||||||| 
seq2  CTT--CATCCTACGTTC-ATCTTTCTT--CTTCTTTCTT--CTTCTTTC-  171

seq1  TTGCGATTCTCCCAATTCAGTGTCAGTCTTTCATTGTTCTCCCATCTTTG  250
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGA-TCTCCCAATTCAGTGTCAGTCTTTCATTGTTCTCCCATCTTTG  220

seq1  ATGTTCTTAGAGTCTCAGAACTACATGACCATCTGTACATTAGGCCTCTC  300
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTAGAGTCTCAGAACTACATGACCATCTGTACATTAGGCCTCTC  270

seq1  TACTTAGTTGCATCACAAAAATCTTAAGAGGCTCCTCTGGGAACTCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGTTGCATCACAAAAATCTTAAGAGGCTCCTCTGGGAACTCTACT  320

seq1  TCCGTGCCCAGAATCCTCTTTCCTAACAAATGAAAGCATTGTCAGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGCCCAGAATCCTCTTTCCTAACAAATGAAAGCATTGTCAGAACAA  370

seq1  TTGAACAAGCTGGAGAACCTGGAATCAGCCGTGAAAACTACTTCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAAGCTGGAGAACCTGGAATCAGCCGTGAAAACTACTTCTGCCTC  420

seq1  AAGACTGTAACTAATCACTATGAACTCCAAAAATACATTCTAAATATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTAACTAATCACTATGAACTCCAAAAATACATTCTAAATATCTT  470

seq1  AGGGGCTGAGCCAGTTCTTTTGATCTCTCCATAGATAGGCATCAGTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTGAGCCAGTTCTTTTGATCTCTCCATAGATAGGCATCAGTACCT  520

seq1  AGCATCCTCTCTGACCACCCTGCATCCTATTCTTAGCCTTTTCCTTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTCTCTGACCACCCTGCATCCTATTCTTAGCCTTTTCCTTTTCC  570

seq1  TTGGTGCACAGGAGACAGTTATCATTACAACTCTTTTAAGAGTTGAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCACAGGAGACAGTTATCATTACAACTCTTTTAAGAGTTGAAACC  620

seq1  TTGAACATGATCAAGAATATCTAGGGATTCCTGAGGCAACAGAGAGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATGATCAAGAATATCTAGGGATTCCTGAGGCAACAGAGAGGACA  670

seq1  AGGACTTTATGAAGTTATGAGAACAGAGAGGACCCTTTCACCAGGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTATGAAGTTATGAGAACAGAGAGGACCCTTTCACCAGGTCTCT  720

seq1  GGTTAAAACCACTCACCAATAGAAAAGAACTTCAACAAAATTAACAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAACCACTCACCAATAGAAAAGAACTTCAACAAAATTAACAACTG  770

seq1  CTTAAAGCCTCTCCCTCCCCAAATATAATCCTGAAATTTTTTAGAAGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCCTCTCCCTCCCCAAATATAATCCTGAAATTTTTTAGAAGTCT  820

seq1  CACCAGAAATTCCATTTGTAAGGAAAGAACATGTACTAACACCCTGTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAATTCCATTTGTAAGGAAAGAACATGTACTAACACCCTGTTTA  870

seq1  GCCCCAGCAGCCCCAGTTGTATTAGATCAATTACAATTCCATTCATAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCAGCCCCAGTTGTATTAGATCAATTACAATTCCATTCATAGTA  920

seq1  TTTCCACAGATAACCTGTGATATCACTTTATCACTTTCAAAATAGAGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAGATAACCTGTGATATCACTTTATCACTTTCAAAATAGAGAGA  970

seq1  ATTTCTTAGTTACGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAGTTACGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT  1020

seq1  TTTGTCTTGTTTTGTTTTGTTTTGTTTTTTTGAGACAGGGTTTCTCTGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTGTTTTGTTTTGTTTTGTTTTTTTGAGACAGGGTTTCTCTGTG  1070

seq1  TGGCCCTGGCTATCCTGGAATTC  1123
      |||||||||||||||||||||||
seq2  TGGCCCTGGCTATCCTGGAATTC  1093