BAC Information

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BAC

Clone NameB6Ng01-101H20
Chromosome6 (Build37)
Map Location 41,693,023 - 41,694,114
singlet/doubletsinglet
Overlap genenone
Upstream geneMgam, EG638904, Moxd2, LOC621968, BC048599, 1700074P13Rik, LOC194360, 1810009J06Rik, LOC100040208, 2210010C04Rik, LOC100039790, Tcrb-V8.2, LOC100040359, LOC100040333, Try4, 1810049H19Rik, Try10, Prss3, EG436523, EG386551, LOC100040233, Prss1, Prss2, Tcrb-V13, Ephb6, Trpv6, Trpv5, 1700034O15Rik, Kel
Downstream geneOlfr459, Pip, Sval2, Sval1, Sval3, Sva, Tas2r139, Tas2r144, Gstk1, Tmem139, Casp2, Clcn1, 6330503C03Rik, Zyx, Epha1, Tas2r143, Tas2r135, Tas2r126, Olfr458, Olfr457, Olfr456, LOC232745, EG546896, Eapa2, BC011487, 3321401G04Rik, LOC100039918, GA_x5J8B7W6337-801345-802245, Olfr453
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101H20.bB6Ng01-101H20.g
ACCDH910657DH910658
length3531,090
definitionDH910657|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H20, 5' end.DH910658|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atagagacagaggcaaatgcacagggcctgcatggatttgcatcaggttc
tctctgtatatattgtggcttcctgagtatacaaatgggtgtgtccctgt
agcttagacattttagtggggctcttatccctctgtttgtttggttttgt
tttttgagttttgggatttatttatttatttatttggttttgttgttttg
ttttgtctaattctgatgtgttagtttctgttttattttatttaactatt
ttattgtattttgttattattccttggaattatgttttctaatgagacac
agtaagaaatagattttcatgggaagggaagtagggaggatttgggatgg
gta

gaattcatcattatgttaatcatgatatcaatccagttcctgccagagtt
ctcaacatcatgttttcgaaatgatttttcttaccactgtaagctgctaa
gatattatctttgagtgttatttagaaatgaaatatgaggacaggaagtt
agcctaggaacctgtgaaaactgacccccctttttcaaatgaatatttat
ccaactagaaagggggtgtttagaggaataggagaatagggtttgtttgc
tttctttgtgtaggctttggaaacaatatttcatcacatatccccagctg
tcctgaactccatgccttggtatcttgggctataggtgtacattaaccat
tcccaataaggctttctttaagcacatctgacaccaggatttacttcatt
caatttgccatttcaggattttataattcaggctctaaaagttttagtta
tcctaatctgtaatcgttgagttcagattaagctgtcagtttgtagttag
atttgttcactattcctgtgcctttgaaaagaagatagagaaaagcagat
gtgctagtgggcttcttgttttctctattagtgagcatgtttctggttgt
gacagatacttggccagcccgactggagtaaaaagacttcttttctcata
taagcacacagagaaaattttgagcagtgatacagaagggctgttcacat
tatatcttctaaaactggctctgctctgttgctttcttttatgtatgtgt
ggaagctctcagggtgcacctgtgagatctaccattataaaaggacgctc
tcagtccagtttttaaaatgctggcaaagagctacgattggtgttgcttt
gaagtcccacatcatcttttctattgggaacaggagagtacttagctgat
tgggccaggttactggccattaagcctgttgtctggtctggtagagtata
gtctttgaaaggtagtttttgtattctgagatgattgttatagaaggaaa
gatgcatttttccaagagaaaaaaaaagtacttccaaggcaactagcttg
ggcaagacaatccctagtattaaatatctgtatcaattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_41693023_41694114
seq2: B6Ng01-101H20.g_68_1157

seq1  GAATTCATCATTATGTTAATCATGATATCAATCCAGTTCCTGCCAGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTATGTTAATCATGATATCAATCCAGTTCCTGCCAGAGTT  50

seq1  CTCAACATCATGTTTTCGAAATGATTTTTCTTACCACTGTAAGCTGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACATCATGTTTTCGAAATGATTTTTCTTACCACTGTAAGCTGCTAA  100

seq1  GATATTATCTTTGAGTGTTATTTAGAAATGAAATATGAGGACAGGAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATCTTTGAGTGTTATTTAGAAATGAAATATGAGGACAGGAAGTT  150

seq1  AGCCTAGGAACCTGTGAAAACTGACCCCCCTTTTTCAAATGAATATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGGAACCTGTGAAAACTGACCCCCCTTTTTCAAATGAATATTTAT  200

seq1  CCAACTAGAAAGGGGGTGTTTAGAGGAATAGGAGAATAGGGTTTGTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTAGAAAGGGGGTGTTTAGAGGAATAGGAGAATAGGGTTTGTTTGC  250

seq1  TTTCTTTGTGTAGGCTTTGGAAACAATATTTCATCACATATCCCCAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTGTAGGCTTTGGAAACAATATTTCATCACATATCCCCAGCTG  300

seq1  TCCTGAACTCCATGCCTTGGTATCTTGGGCTATAGGTGTACATTAACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACTCCATGCCTTGGTATCTTGGGCTATAGGTGTACATTAACCAT  350

seq1  TCCCAATAAGGCTTTCTTTAAGCACATCTGACACCAGGATTTACTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATAAGGCTTTCTTTAAGCACATCTGACACCAGGATTTACTTCATT  400

seq1  CAATTTGCCATTTCAGGATTTTATAATTCAGGCTCTAAAAGTTTTAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGCCATTTCAGGATTTTATAATTCAGGCTCTAAAAGTTTTAGTTA  450

seq1  TCCTAATCTGTAATCGTTGAGTTCAGATTAAGCTGTCAGTTTGTAGTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATCTGTAATCGTTGAGTTCAGATTAAGCTGTCAGTTTGTAGTTAG  500

seq1  ATTTGTTCACTATTCCTGTGCCTTTGAAAAGAAGATAGAGAAAAGCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCACTATTCCTGTGCCTTTGAAAAGAAGATAGAGAAAAGCAGAT  550

seq1  GTGCTAGTGGGCTTCTTGTTTTCTCTATTAGTGAGCATGTTTCTGGTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGTGGGCTTCTTGTTTTCTCTATTAGTGAGCATGTTTCTGGTTGT  600

seq1  GACAGATACTTGGCCAGCCCGACTGGAGTAAAAAGACTTCTTTTCTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATACTTGGCCAGCCCGACTGGAGTAAAAAGACTTCTTTTCTCATA  650

seq1  TAAGCACACAGAGAAAA-TTTGAGCAGTGATACAGAAGGGCTGTTCACAT  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAGCACACAGAGAAAATTTTGAGCAGTGATACAGAAGGGCTGTTCACAT  700

seq1  TATATCTTCTAAAACTGGCTCTGCTCTGTTGC-TTCTTTTATGTATGTGT  748
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATATCTTCTAAAACTGGCTCTGCTCTGTTGCTTTCTTTTATGTATGTGT  750

seq1  GGAAGCTCTCAGGGTGCACCTGTGAGATCTACCATTATAAAAGGACGCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTCTCAGGGTGCACCTGTGAGATCTACCATTATAAAAGGACGCTC  800

seq1  TCAGTCCAGTTTTTAAAATGCTGGCAAAGAGCTACGATTGGTGTTGCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCAGTTTTTAAAATGCTGGCAAAGAGCTACGATTGGTGTTGCTTT  850

seq1  GAAGTCCCACATCATCTTTTCTATTGGGAACAGGAGAGTACTTAGCTGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCCACATCATCTTTTCTATTGGGAACAGGAGAGTACTTAGCTGAT  900

seq1  TGGCCCAGGTTACTGGCCATTAAGCCTGTTGTCTGGTCTGGTAGGAGTAT  948
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGGCCAGGTTACTGGCCATTAAGCCTGTTGTCTGGTCTGGTA-GAGTAT  949

seq1  AGTCTTTGAAAGGTAG-TTATGTATTCTGAGATGAATGTTTATAGAAGGA  997
      |||||||||||||||| || ||||||||||||||| || |||||||||||
seq2  AGTCTTTGAAAGGTAGTTTTTGTATTCTGAGATGATTG-TTATAGAAGGA  998

seq1  AAGATGCA-TTTTCCAAGAGAAAAAAAAAGTACTTCACAAGGCAACTAGC  1046
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  AAGATGCATTTTTCCAAGAGAAAAAAAAAGTACTTC-CAAGGCAACTAGC  1047

seq1  TT-GGCCAGACAATCCCTAGTCATTATAATAATCTGTATTCAATTGA  1092
      || ||| |||||||||||||| |||| ||| ||||||| ||||||||
seq2  TTGGGCAAGACAATCCCTAGT-ATTA-AAT-ATCTGTA-TCAATTGA  1090


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