BAC Information

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BAC

Clone NameB6Ng01-102B13
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,441 - 18,835,968103,286,408 - 103,287,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B13.bB6Ng01-102B13.g
ACCDH911084DH911085
length1,0001,169
definitionDH911084|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B13, 5' end.DH911085|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,441 - 18,835,968)(103,286,408 - 103,287,575)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcataagccattgctgtt
ctgttcaggaatttttccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctactggtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
acccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaatagagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcataggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagttttatcatata
gatctttcacttccttagttagagtcacgccgagatattttatattattt
gtgactattgagaaggtgtgtttccctaatttctttctcagcctgtttat

gaattccaaacatcacacccttgcagaaactatctgcatttggaaaaaaa
aatcacattcttaatagggggcagatcatagtctgtttctgcggacagtc
tgaagcatccccgtaacccacacttgggactaaaatggaaacatggtctc
ataatttttctgagttatggttttaaaggaaccataactccaaaattgtt
ggtacagtaatgagcttgagaggaatgacaacaatagctatcaaatatca
ttgattccagagaacattgataagtttggaataataaatcccagtatcaa
aaacctctcacagtcaggaatctattcaagttccagctgatagatgcctt
tgtcattcttcgggacatccaaaagtcaattattgtcatttttaccaata
ggaacataaaaaaataaataattcctacagatgttgtatattgataaaaa
tcacaaatttgacaagcttgaatatcacagcttcaccttctcaatctaca
tatatcttactggacatatgaatataagcttaacttgtagttttcagtat
ttatgtccctcctgctccaccctctgactgttccacatcccatacttcct
cactccccatctccaagaggatgaccctgcccactcactgccaccccacc
aaacaacaccactccctggggccacaagtctctccagggttaagtacatc
ttctctcactgagtccagacccaattctgtgatgtttggaattctgggga
atttttttttttttaaatttttattagatattttctttatttacatttta
aatgctgtcccctttcccagtttctcctttgaaactccttttctcctccc
cactccctctgctcaccaacccaccaactcctgcttcctagccctggaat
tcacctgtactgggacatagaaacttcacaggatgaaggcctctcctccc
attgatggctgactagaccatactctgctacatatgcagctaacagccat
gaatcccaccatgtgtttccttggtcgtggtttaatctcagggagccttt
ggggtactgaatagtccatatttgttgttcctccttatggggctgccaaa
ccctcaatctcctgggttacatctcttgcttcctttaatgagaaacctgt
gccttcctccaatgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-102B13.b_49_576 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  CACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| | ||||||| ||||||||||||||||||||||| | ||||||
seq2  ATGGGCACA-GGGAAAAATTCCTGAACAGAACAGCAATGGCTTATGCTGT  299

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGACACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr10_103286408_103287575
seq2: B6Ng01-102B13.g_67_1235 (reverse)

seq1  CCATCCATTGGAGGAA-GCACAGGTTCCTCAATAAAGG-AGCCAGAGAAA  48
      |||| ||||||||||| ||||||||| |||| |||||| ||| |||| | 
seq2  CCATTCATTGGAGGAAGGCACAGGTTTCTCATTAAAGGAAGCAAGAG-AT  49

seq1  GTACACCAGGAGATGAAGGGGTTTGCAGCCCCAT-AGGAGGAACAAC-AA  96
      |||  |||||||||  |||| || |||||||||| |||||||||||| ||
seq2  GTAACCCAGGAGATTGAGGGTTTGGCAGCCCCATAAGGAGGAACAACAAA  99

seq1  TATGAACTAATCAGTACCCCCAGAGCTCCCTGAGATTAAACCACCAACCA  146
      |||| |||| |||||||||| |  |||||||||||||||||||| |  | 
seq2  TATGGACTATTCAGTACCCCAAAGGCTCCCTGAGATTAAACCACGA--CC  147

seq1  AAGAAAACACATGGTGGGATTCATGGCTG-TAGCTGCATATGTAGCAGAG  195
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGGAAACACATGGTGGGATTCATGGCTGTTAGCTGCATATGTAGCAGAG  197

seq1  TATGGTCTAGTCAGCCATCAATGGGAGGAGAGGCCCTTCATCCTGTGAAG  245
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATGGTCTAGTCAGCCATCAATGGGAGGAGAGG-CCTTCATCCTGTGAAG  246

seq1  TTTCTATGTCCCAGTACAGGTGAATTCCAGGGCTAGGAAGCAGGAGTTGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGTCCCAGTACAGGTGAATTCCAGGGCTAGGAAGCAGGAGTTGG  296

seq1  TGGGTTGGTGAGCAGAGGGAGTGGGGAGGAGAAAAGGAGTTTCAAAGGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGGTGAGCAGAGGGAGTGGGGAGGAGAAAAGGAGTTTCAAAGGAG  346

seq1  AAACTGGGAAAGGGGACAGCATTTAAAATGTAAATAAAGAAAATATCTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGAAAGGGGACAGCATTTAAAATGTAAATAAAGAAAATATCTAA  396

seq1  TAAAAATTTAAAAAAAAAAAAATTCCCCAGAATTCCAAACATCACAGAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTAAAAAAAAAAAAATTCCCCAGAATTCCAAACATCACAGAAT  446

seq1  TGGGTCTGGACTCAGTGAGAGAAGATGTACTTAACCCTGGAGAGACTTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGGACTCAGTGAGAGAAGATGTACTTAACCCTGGAGAGACTTGT  496

seq1  GGCCCCAGGGAGTGGTGTTGTTTGGTGGGGTGGCAGTGAGTGGGCAGGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAGGGAGTGGTGTTGTTTGGTGGGGTGGCAGTGAGTGGGCAGGGT  546

seq1  CATCCTCTTGGAGATGGGGAGTGAGGAAGTATGGGATGTGGAACAGTCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTTGGAGATGGGGAGTGAGGAAGTATGGGATGTGGAACAGTCAG  596

seq1  AGGGTGGAGCAGGAGGGACATAAATACTGAAAACTACAAGTTAAGCTTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGAGCAGGAGGGACATAAATACTGAAAACTACAAGTTAAGCTTAT  646

seq1  ATTCATATGTCCAGTAAGATATATGTAGATTGAGAAGGTGAAGCTGTGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATGTCCAGTAAGATATATGTAGATTGAGAAGGTGAAGCTGTGAT  696

seq1  ATTCAAGCTTGTCAAATTTGTGATTTTTATCAATATACAACATCTGTAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCTTGTCAAATTTGTGATTTTTATCAATATACAACATCTGTAGG  746

seq1  AATTATTTATTTTTTTATGTTCCTATTGGTAAAAATGACAATAATTGACT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTATTTTTTTATGTTCCTATTGGTAAAAATGACAATAATTGACT  796

seq1  TTTGGATGTCCCGAAGAATGACAAAGGCATCTATCAGCTGGAACTTGAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGTCCCGAAGAATGACAAAGGCATCTATCAGCTGGAACTTGAAT  846

seq1  AGATTCCTGACTGTGAGAGGTTTTTGATACTGGGATTTATTATTCCAAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTGACTGTGAGAGGTTTTTGATACTGGGATTTATTATTCCAAAC  896

seq1  TTATCAATGTTCTCTGGAATCAATGATATTTGATAGCTATTGTTGTCATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAATGTTCTCTGGAATCAATGATATTTGATAGCTATTGTTGTCATT  946

seq1  CCTCTCAAGCTCATTACTGTACCAACAATTTTGGAGTTATGGTTCCTTTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAGCTCATTACTGTACCAACAATTTTGGAGTTATGGTTCCTTTA  996

seq1  AAACCATAACTCAGAAAAATTATGAGACCATGTTTCCATTTTAGTCCCAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATAACTCAGAAAAATTATGAGACCATGTTTCCATTTTAGTCCCAA  1046

seq1  GTGTGGGTTACGGGGATGCTTCAGACTGTCCGCAGAAACAGACTATGATC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGTTACGGGGATGCTTCAGACTGTCCGCAGAAACAGACTATGATC  1096

seq1  TGCCCCCTATTAAGAATGTGATTTTTTTTTCCAAATGCAGATAGTTTCTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCTATTAAGAATGTGATTTTTTTTTCCAAATGCAGATAGTTTCTG  1146

seq1  CAAGGGTGTGATGTTTGGAATTC  1168
      |||||||||||||||||||||||
seq2  CAAGGGTGTGATGTTTGGAATTC  1169