BAC Information

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BAC

Clone NameB6Ng01-102B16
Chromosome6 (Build37)
Map Location 74,734,824 - 74,904,256
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B16.bB6Ng01-102B16.g
ACCDH911088DH911089
length1,1631,103
definitionDH911088|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B16, 5' end.DH911089|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,903,077 - 74,904,256)(74,734,824 - 74,735,942)
sequence
gaattcagttttattatgaatctttaaaagagaattagaaccgacttgaa
gatgttgtgtcccacagaggccagaaagatgacaaggggaaaattcttca
catctcatttttccatgaagtaactgaaggctgaatttccaaaactgatt
tttcgcctgcttttggtaattttgtctctgggggcatttagtgcaaaaga
agaatttcttctacccaagcatcattgctgtttactaagtcagcagtgta
gctctggatatcggtaacaccaagatattgtcatcttgaaaggtcatttc
cagaagtaattcaagagtaccaggatctcatatttcctttgattctgtaa
tggcaaaatcagtagtcagctggggattgaatgggatctgatgaattgta
ccttactagcaatcatgaagatgatagcagtagccaactatatgctatat
cagactatgcattctgacccctgaactctacagatctaatggcttttctt
ttgttttttttttgttttttgtttttgttttttgtttttgtttgtttgtt
tgtttgtctgtttttgttttttgttttgttttctttttcgagacagggtt
tctctatgtagccctgtctgtcctggcactcactttgtagaccaagctgg
cctcaaactcagaaattcgccagcctctgcctcccaagtgctgggattaa
aagtgtgtgccaccaccacctggctaatgttttttcttaaatctatactg
gaggaaacaatgtcttcttgaaatgtaaatgtgcttttttttttaagtct
atgcctttgatgaatctttcactttagcattattcatttcctacctccta
tctcaccatgcaggactgattccagacaagtaaaattcttaagtagtgac
tcttctgggattagatttgtttttacttatttttttattagatattttct
tattacaatttcaaatgccatctcgaaagtccctaataccctccccccac
cctgctaccatacccacccactcccacttctggccctggatcccctgtac
tggggcatataaatttgctagacagggcctctctccaatgatggcactag
gtcacttctgctacattggcgctaaaaccaggctctggggaactgattag
ttccatatgtgtt
gaattccatgagattctcaagtggaccacagcatgtttattacaacaaac
cacaactggtaaaaaagtggaaaacaaatgaccctgcaaaggccaggaac
tggggacacatctacagtgcagtttcaaagttcaagaaacattgcaaagg
aggagacagaataaaacaacaacaacaacaacaaccaaaaacaaaaacaa
aaacaaaaacaagagaaacagaaaatcataatgacatttcatgaattttg
tcactgttttacactgataaattaacataaagtgagaaaattttactttt
gaagtaaatatttaaatcctgagccagatttctttttttttttttacttt
ttatttttattttacttttttatttattacatattttcctcaatgacatt
tccaatgctatcccaaaagtcccccataccctcccccccacttccctacc
cacccattctcatttttttggccctggcgttcccctgtactggggcatat
aaagtttgtgtttccgatgggcctctctttccagtgatggctgactaggc
catcttttgatacatatgcagctagagtcaagagctccggggtactggtt
agttcataatgttgttgcacctacagggttgcagatctcttttgctcctt
ggatactttctctagctcctccattgggggccctgtgatccatccaatag
ctgactgtgagcatccacttatgtgtttgctaggcccctgcctagtctca
caagagacagctatatctgggtcctttcagtaaaatcttgctagtgtatg
cagtggtgtcagtgtttggaagctgattatggggtggatccctagattag
gcagtctctagatggtccatccttttgtcgcagctccaaactttgtctct
gtaactcccagattctatcccactttggttattggagttaagaaaggcat
tatactagtgccttcctagtgtcaaaatgataaatatctttggtatacat
aaaaatagtaaaaatgagacgaaatgtagtttgaataaaaatctaaaata
gaaaccacctttatgttcatttcactacaagagtggaatgttttggaaag
aat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74903077_74904256
seq2: B6Ng01-102B16.b_42_1204 (reverse)

seq1  AACA-ATAT-GAACTAACCAGTACCCCCCAGAGCTCGTGTTTCTAGCGGC  48
      |||| |||| ||||||| ||||   ||||||||  | || || ||||| |
seq2  AACACATATGGAACTAATCAGT--TCCCCAGAG--CCTGGTTTTAGCGCC  46

seq1  ATATGTAGCAGAAGATGGCCTAGTTGGCCATCATTGGGAAGAGAGGCCCC  98
      | |||||||||||| || ||||||  |||||||||||  |||||||||| 
seq2  A-ATGTAGCAGAAG-TGACCTAGT--GCCATCATTGG--AGAGAGGCCC-  89

seq1  TTGGTCTAGCAAACTTTATATGCCCCAGTACAGGGGAATTCCAGGGCCAA  148
         |||||||||| |||||||||||||||||||||||  ||||||||| |
seq2  --TGTCTAGCAAA-TTTATATGCCCCAGTACAGGGGA--TCCAGGGCC-A  133

seq1  GAAGTGGGAGTGGGTGGGTATGGTAGCAGGGTGGGGGGAGGGTATAGGGA  198
      |||||||||||||||||||||||||||||||||||||||||||||  || 
seq2  GAAGTGGGAGTGGGTGGGTATGGTAGCAGGGTGGGGGGAGGGTATTAGGG  183

seq1  ACTTTCGAGATGGCATTTGAAATGTAAATAAAGAAAATATCTAATAAAAA  248
      |||||||||||||||||||||||   ||| ||||||||||||||||||||
seq2  ACTTTCGAGATGGCATTTGAAATTGTAAT-AAGAAAATATCTAATAAAAA  232

seq1  AATAAGTAAAAAACAAATCTAATCCAAGAAGAGTCACTACTTAAGAATTT  298
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  AATAAGT-AAAAACAAATCTAATCCCAGAAGAGTCACTACTTAAGAATTT  281

seq1  TACTTGTCTGGAATCAGTCCTGCATGGTGAGATAGGAGGTAGGAAATGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTCTGGAATCAGTCCTGCATGGTGAGATAGGAGGTAGGAAATGAA  331

seq1  TAATGCTAAAGTGAAAGATTCATCAAAGGCATAGACTTAAAAAAAAAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTAAAGTGAAAGATTCATCAAAGGCATAGACTTAAAAAAAAAAGC  381

seq1  ACATTTACATTTCAAGAAGACATTGTTTCCTCCAGTATAGATTTAAGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACATTTCAAGAAGACATTGTTTCCTCCAGTATAGATTTAAGAAA  431

seq1  AAACATTAGCCAGGTGGTGGTGGCACACACTTTTAATCCCAGCACTTGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAGCCAGGTGGTGGTGGCACACACTTTTAATCCCAGCACTTGGG  481

seq1  AGGCAGAGGCTGGCGAATTTCTGAGTTTGAGGCCAGCTTGGTCTACAAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGCTGGCGAATTTCTGAGTTTGAGGCCAGCTTGGTCTACAAAG  531

seq1  TGAGTGCCAGGACAGACAGGGCTACATAGAGAAACCCTGTCTCGAAAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCCAGGACAGACAGGGCTACATAGAGAAACCCTGTCTCGAAAAAG  581

seq1  AAAACAAAACAAAAAACAAAAACAGACAAACAAACAAACAAACAAAAACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAAAACAAAAACAGACAAACAAACAAACAAACAAAAACA  631

seq1  AAAAACAAAAACAAAAAACAAAAAAAAAACAAAAGAAAAGCCATTAGATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAAAACAAAAAAAAAACAAAAGAAAAGCCATTAGATC  681

seq1  TGTAGAGTTCAGGGGTCAGAATGCATAGTCTGATATAGCATATAGTTGGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGTTCAGGGGTCAGAATGCATAGTCTGATATAGCATATAGTTGGC  731

seq1  TACTGCTATCATCTTCATGATTGCTAGTAAGGTACAATTCATCAGATCCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTATCATCTTCATGATTGCTAGTAAGGTACAATTCATCAGATCCC  781

seq1  ATTCAATCCCCAGCTGACTACTGATTTTGCCATTACAGAATCAAAGGAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCCCCAGCTGACTACTGATTTTGCCATTACAGAATCAAAGGAAA  831

seq1  TATGAGATCCTGGTACTCTTGAATTACTTCTGGAAATGACCTTTCAAGAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATCCTGGTACTCTTGAATTACTTCTGGAAATGACCTTTCAAGAT  881

seq1  GACAATATCTTGGTGTTACCGATATCCAGAGCTACACTGCTGACTTAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATCTTGGTGTTACCGATATCCAGAGCTACACTGCTGACTTAGTA  931

seq1  AACAGCAATGATGCTTGGGTAGAAGAAATTCTTCTTTTGCACTAAATGCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAATGATGCTTGGGTAGAAGAAATTCTTCTTTTGCACTAAATGCC  981

seq1  CCCAGAGACAAAATTACCAAAAGCAGGCGAAAAATCAGTTTTGGAAATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGACAAAATTACCAAAAGCAGGCGAAAAATCAGTTTTGGAAATTC  1031

seq1  AGCCTTCAGTTACTTCATGGAAAAATGAGATGTGAAGAATTTTCCCCTTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAGTTACTTCATGGAAAAATGAGATGTGAAGAATTTTCCCCTTG  1081

seq1  TCATCTTTCTGGCCTCTGTGGGACACAACATCTTCAAGTCGGTTCTAATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTCTGGCCTCTGTGGGACACAACATCTTCAAGTCGGTTCTAATT  1131

seq1  CTCTTTTAAAGATTCATAATAAAACTGAATTC  1180
      ||||||||||||||||||||||||||||||||
seq2  CTCTTTTAAAGATTCATAATAAAACTGAATTC  1163

seq1: chr6_74734824_74735942
seq2: B6Ng01-102B16.g_68_1170

seq1  GAATTCCATGAGATTCTCAAGTGGACCACAGCATGTTTATTACAACAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGATTCTCAAGTGGACCACAGCATGTTTATTACAACAAAC  50

seq1  CACAACTGGTAAAAAAGTGGAAAACAAATGACCCTGCAAAGGCCAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTGGTAAAAAAGTGGAAAACAAATGACCCTGCAAAGGCCAGGAAC  100

seq1  TGGGGACACATCTACAGTGCAGTTTCAAAGTTCAAGAAACATTGCAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACACATCTACAGTGCAGTTTCAAAGTTCAAGAAACATTGCAAAGG  150

seq1  AGGAGACAGAATAAAACAACAACAACAACAACAACCAAAAACAAAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACAGAATAAAACAACAACAACAACAACAACCAAAAACAAAAACAA  200

seq1  AAACAAAAACAAGAGAAACAGAAAATCATAATGACATTTCATGAATTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAACAAGAGAAACAGAAAATCATAATGACATTTCATGAATTTTG  250

seq1  TCACTGTTTTACACTGATAAATTAACATAAAGTGAGAAAATTTTACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTTACACTGATAAATTAACATAAAGTGAGAAAATTTTACTTTT  300

seq1  GAAGTAAATATTTAAATCCTGAGCCAGATTTCTTTTTTTTTTTTTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAATATTTAAATCCTGAGCCAGATTTCTTTTTTTTTTTTTACTTT  350

seq1  TTATTTTTATTTTACTTTTTTATTTATTACATATTTTCCTCAATGACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTTTACTTTTTTATTTATTACATATTTTCCTCAATGACATT  400

seq1  TCCAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTTCCCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTTCCCTACC  450

seq1  CACCCATTCTCATTTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATTCTCATTTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATAT  500

seq1  AAAGTTTGTGTTTCCGATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGTGTTTCCGATGGGCCTCTCTTTCCAGTGATGGCTGACTAGGC  550

seq1  CATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  600

seq1  AGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCTCTTTTGCTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCTCTTTTGCTCCTT  650

seq1  GGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  700

seq1  CTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCCTGCCTAGTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCCTGCCTAGTCTCA  750

seq1  CAAGAGACAGCTATATCTGGGTCCTTTCAGTAAAATCTTGCTAGTGTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACAGCTATATCTGGGTCCTTTCAGTAAAATCTTGCTAGTGTATG  800

seq1  CAGTGGTGTCAGTGTTTGGAAGCTGATTATGGGGTGGATCCCTAGATAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGTGGTGTCAGTGTTTGGAAGCTGATTATGGGGTGGATCCCTAGATTAG  850

seq1  GCAGTCTCTAGATGGTCCATCCTTTTGTCGCAGCTCCAAACTTTGTCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTCTAGATGGTCCATCCTTTTGTCGCAGCTCCAAACTTTGTCTCT  900

seq1  GTAACTCCCAGATTTCTATCCCAACTTTGGTTATT-GAGTTAAGAAAGGC  949
      |||||||||||| ||||||||| |||||||||||| ||||||||||||||
seq2  GTAACTCCCAGA-TTCTATCCC-ACTTTGGTTATTGGAGTTAAGAAAGGC  948

seq1  ATTATACTAAGTGCCTTTCCTAGTGTCAAAAATGATAAATATCTTTGGTA  999
      |||||||| |||||| ||||||||||| ||||||||||||||||||||||
seq2  ATTATACT-AGTGCC-TTCCTAGTGTC-AAAATGATAAATATCTTTGGTA  995

seq1  TACATTAAAAATAGTAAAAATTGAGAACGAAAAATGTAGTTTGATATAAA  1049
      |||| ||||||||||||||| |||| |||  ||||||||||||| |||||
seq2  TACA-TAAAAATAGTAAAAA-TGAG-ACG--AAATGTAGTTTGA-ATAAA  1039

seq1  AATCATAAAATAGAAACCAACTTTAATGTTTCATTTCACTAACAAAGAGT  1099
      |||| |||||||||||||| |||| ||| ||||||||||||   ||||||
seq2  AATC-TAAAATAGAAACCACCTTT-ATG-TTCATTTCACTA--CAAGAGT  1084

seq1  TGAATGTTTTTGAAAAGAAT  1119
       ||||| ||||| |||||||
seq2  GGAATG-TTTTGGAAAGAAT  1103