BAC Information

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BAC

Clone NameB6Ng01-102H13
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102H13.bB6Ng01-102H13.g
ACCDH911355DH911356
length1,0051,207
definitionDH911355|Mus musculus domesticus DNA, BAC clone: B6Ng01-102H13, 5' end.DH911356|Mus musculus domesticus DNA, BAC clone: B6Ng01-102H13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcaaaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggaggtaagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gatcataggtgtgtgggttcatttctgggttttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctattgagaaggtgtgtttccctaatttctttctcagcctgttt
attct

gaattcttctgacaaatggagattccctacagatacttaaaagaacagcc
aagttacacgcatatgcaagaatttaccaaggcctaggaaataggggggt
tgtggtattgcattattcatgagatggtctgctagagcagacccccctgg
tgctagctttcacaaggctcaaaggagtagcacaaattgtgactagggtg
tgaaatccttacctggcattagctgaccctaggcagggctgttttatctt
tactataaacattacctggttcctgtaagtcgctttgaagtcattcctct
gttttgtgtcagatagcttcaatgtactttacctgctatgacatccttcc
cccttttgttttctgtattataaaagattggtgttcctttgtgacgttac
attcagatccaacacactatctcatgtcctgtctgtcaccccattctcac
caactctatgtccatctgtccgagagtctgattcccacggattgaggggg
gcctgactgggtctagtccatggcagtgcatcatctctgaatgaacacag
acctggcagtcctctactatatgtgtgttgggggcctcatatcagctggt
gtatgctgtctgattggtggttcaatgtttgagacatctcaggggtcgag
gttaattaagactgatggggtcttcctacagggttgccctcttccttagc
ttctctcagccttccataatttaacaacaggggtcagctcttctgtccat
tggttgtgtgcaactatctgcctctgactctttcagctgcttgttgggtc
tttcagagggcagtcatgatagatccctttttatgaatgctccataacct
tgataataatgtcaggtttgggacctccccttgagctgaatctcactttg
ggcttgttactggactttctttctcagctctcttcatttcatccctgtaa
ttcttttagtcaggaaaattttgtgtcagagatgagactgtgatacccct
tcgtcatttgatccctgtcctctgctgagggggtctataagtcctctcct
actgtctgcattcatctaaagtctccttccttgagtctgggagtccttac
atcaagtcctggaattcggaaggtccttaattctcacacataggtcggtt
cactattttcagggcactaagtttggctatttgcacgaatcgatagtagt
gatgtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-102H13.b_48_565 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGATCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| ||||||||||||||||| |||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTACCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| | |||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTTTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


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