BAC Information

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BAC

Clone NameB6Ng01-102L11
Chromosome6 (Build37)
Map Location 23,099,789 - 23,257,757
singlet/doubletdoublet
Overlap geneEG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2
Upstream geneA430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022, Ptprz1, Aass
Downstream geneRnf133, Rnf148, Tas2r118, LOC100041082, Slc13a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102L11.bB6Ng01-102L11.g
ACCDH911527DH911528
length5671,185
definitionDH911527|Mus musculus domesticus DNA, BAC clone: B6Ng01-102L11, 5' end.DH911528|Mus musculus domesticus DNA, BAC clone: B6Ng01-102L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,099,789 - 23,100,361)(23,256,571 - 23,257,757)
sequence
aagacctctggaagagcagccagcattcttagcctctgagctacctctct
ggtcccaatagtagtactgttttagagggaactcttgctgaacctgaagc
tccccatttcacctgtactgggtggcccaccctcacatcttttacgctga
cagcctctggcatgctccgttttcacatggctgtaaatcaaattcaggtc
cttatccttgtgtaacactttccaactgacccaggtccactttctaactt
ctttttcatgccttcttgcattattcatgcctattttattttgttgatgc
tcaccatttactatcatatctagtctctgagaaactttcagtgtgcaata
aatgattgttgcctagaggtcagaacgtcattttgcagatttctagtgtt
tgtgttcattcctttattgaaatatgttacttagtgctataactcagcaa
tacagaacttgactagcaagtggaaagccatagaattgattagaagcatt
gagagaagtggaaggtggaggaggtagagaaggaaggaaggaaggaagga
aggaaggaaggaaggaa
gaattcattgtgtgtagtgatgaggatactaaagaagacctagggggtgt
tggtcaggaccaagaattaagaaagccaataataaagaaaatgagtaact
gtcaggacatgtccctgttactgaggcactcttagtctgggtgtgaatta
aaagaacagtgtgataatgctcaacttccttcatcttcagatatgtttga
gaaggagaaaagaaggggatattgggaggaaaatatttagtcattgagta
tatagttttataaattcgtaaagtaatgtgtggatatagatgttctttct
gagaacatagagtactttatcctaaactcctctgagaaataaggtgggca
gagagtaaatacgacctgactgcctggatgatataatgagactatcttgt
caacctagcgtggtaagataattttgattaaatttacttctttggatcaa
ggccatatatgcagaaggtacttgattgaatcgaaatgtgtgcttaaaag
gaacggtttacatggttaagggctaagagaggcagccgtgaagtaaagca
ggtcacttcactgggcagaacaaaggaagagagaacactggggaaagacg
ggctagggaatttgatcgcagctgggctaggtgtggtgttttggatgctt
gcaggacacggtattttaaaaataagtactgtcaaaaactagccatcctt
ctcacagatgtctgtgatccggaaagatgttttcagagtcagaacaaagc
taccaggacctgattcacagttccagagagagaagagaaaatgaaccatc
atattagtgacattctatttaaggaagaaagccaattttctttcacgctc
tgattatctggttgcatgtgaaatttaatactagttagccctgattgtaa
cagctaaacttctgctaattgacaccctaatctcacttgcttttgtctag
atagcatgcgttgttttcagatcactcttcctacgaatggctgtactttc
tatggtcattttaaaatggtgcttgtgtacagaatgcatccctcattttg
tttacttcacggctggaaaagcagttaccatggtgaagaacccagcacct
atagaacctcactcacttctcagattcatgggtttataacctatattgaa
atatgaaacatgcagccaattgcaataaatctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_23099789_23100361
seq2: B6Ng01-102L11.b_46_618

seq1  GAATTCAAGACCTCTGGAAGAGCAGCCAGCACTCTTAGCCTCTGAGCTAC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCAAGACCTCTGGAAGAGCAGCCAGCATTCTTAGCCTCTGAGCTAC  50

seq1  CTCTCTGGTCCCAATAGTAGTACTGTTTTAGAGGGAACTCTTGCTGAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGTCCCAATAGTAGTACTGTTTTAGAGGGAACTCTTGCTGAACC  100

seq1  TGAAGCTCCCCATTTCACCTGTACTGGGTGGCCCACCCTCACATCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCCCCATTTCACCTGTACTGGGTGGCCCACCCTCACATCTTTTA  150

seq1  CGCTGACAGCCTCTGGCATGCTCCGTTTTCACATGGCTGTAAATCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACAGCCTCTGGCATGCTCCGTTTTCACATGGCTGTAAATCAAATT  200

seq1  CAGGTCCTTATCCTTGTGTAACACTTTCCAACTGACCCAGGTCCACTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTTATCCTTGTGTAACACTTTCCAACTGACCCAGGTCCACTTTC  250

seq1  TAACTTCTTTTTCATGCCTTCTTGCATTATTCATGCCTATTTTATTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTTTTTCATGCCTTCTTGCATTATTCATGCCTATTTTATTTTGT  300

seq1  TGATGCTCACCATTTACTATCATATCTAGTCTCTGAGAAACTTTCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTCACCATTTACTATCATATCTAGTCTCTGAGAAACTTTCAGTGT  350

seq1  GCAATAAATGATTGTTGCCTAGAGGTCAGAACGTCATTTTGCAGATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAATGATTGTTGCCTAGAGGTCAGAACGTCATTTTGCAGATTTCT  400

seq1  AGTGTTTGTGTTCATTCCTTTATTGAAATATGTTACTTAGTGCTATAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTGTTCATTCCTTTATTGAAATATGTTACTTAGTGCTATAACT  450

seq1  CAGCAATACAGAACTTGACTAGCAAGTGGAAAGCCATAGAATTGATTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATACAGAACTTGACTAGCAAGTGGAAAGCCATAGAATTGATTAGA  500

seq1  AGCATTGAGAGAAGTGGAAGGTGGAGGAGGTAGAGAAGGAAGGAAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGAGAGAAGTGGAAGGTGGAGGAGGTAGAGAAGGAAGGAAGGAAG  550

seq1  GAAGGAAGGAAGGAAGGAAGGAA  573
      |||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAA  573

seq1: chr6_23256571_23257757
seq2: B6Ng01-102L11.g_68_1252 (reverse)

seq1  AAAAGATTTATTGCAATGGGCTGCATGATTCATATATTCATAGTAGGTTA  50
      ||||||||||||||||| ||||||||| ||||||| ||||   |||||||
seq2  AAAAGATTTATTGCAATTGGCTGCATGTTTCATAT-TTCAATATAGGTTA  49

seq1  TAAAACCCATGAATCTTGAGAAGTGA-TGAGG-TCTATAGGTTGCTGGGT  98
      | ||||||||||||| |||||||||| ||||| |||||||| ||||||||
seq2  T-AAACCCATGAATC-TGAGAAGTGAGTGAGGTTCTATAGG-TGCTGGGT  96

seq1  TCTTCA-CATGGTTACTGCTTTTCCAGCCGTGAAGTAAAC-AAATGAGGG  146
      |||||| |||||| |||||||||||||||||||||||||| |||||||||
seq2  TCTTCACCATGGTAACTGCTTTTCCAGCCGTGAAGTAAACAAAATGAGGG  146

seq1  ATGCATTCTGTACAC-AGCACATTTTTAAAATGACCATAGAAAGTACAGC  195
      ||||||||||||||| |||||  |||||||||||||||||||||||||||
seq2  ATGCATTCTGTACACAAGCACCATTTTAAAATGACCATAGAAAGTACAGC  196

seq1  CATTCGTAGGAAGAGTGATCTTGAAAACAACGCATGCTATTCTAGACAAA  245
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  CATTCGTAGGAAGAGTGATC-TGAAAACAACGCATGCTA-TCTAGACAAA  244

seq1  AGCAAGTGAGATTAGGGTGTCAATTAGCAGAAGTTTAGCTGTTACAATCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTGAGATTAGGGTGTCAATTAGCAGAAGTTTAGCTGTTACAATCA  294

seq1  GGGCTAACTAGTATTAAAATTTCACATGCAACCAGATAATCAGAGCCTGA  345
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  GGGCTAACTAGTATT-AAATTTCACATGCAACCAGATAATCAGAGCGTGA  343

seq1  AAGAAAATTGGCTTTCTTCCTTAAATAGAATGTCACTAATATGATGGTTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTGGCTTTCTTCCTTAAATAGAATGTCACTAATATGATGGTTC  393

seq1  ATTTTCTCTTCTCTCTCTGGAACTGTGAATCAGGTCCTGGTAGCTTTGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTTCTCTCTCTGGAACTGTGAATCAGGTCCTGGTAGCTTTGTT  443

seq1  CTGACTCTGAAAACATCTTTCCGGATCACAGACATCTGTGAGAAGGATGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGAAAACATCTTTCCGGATCACAGACATCTGTGAGAAGGATGG  493

seq1  CTAGTTTTTGACAGTACTTATTTTTAAAATACCGTGTCCTGCAAGCATCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTGACAGTACTTATTTTTAAAATACCGTGTCCTGCAAGCATCC  543

seq1  AAAACACCACACCTAGCCCAGCTGCGATCAAATTCCCTAGCCCGTCTTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCACACCTAGCCCAGCTGCGATCAAATTCCCTAGCCCGTCTTTC  593

seq1  CCCAGTGTTCTCTCTTCCTTTGTTCTGCCCAGTGAAGTGACCTGCTTTAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTTCTCTCTTCCTTTGTTCTGCCCAGTGAAGTGACCTGCTTTAC  643

seq1  TTCACGGCTGCCTCTCTTAGCCCTTAACCATGTAAACCGTTCCTTTTAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGGCTGCCTCTCTTAGCCCTTAACCATGTAAACCGTTCCTTTTAAG  693

seq1  CACACATTTCGATTCAATCAAGTACCTTCTGCATATATGGCCTTGATCCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTTCGATTCAATCAAGTACCTTCTGCATATATGGCCTTGATCCA  743

seq1  AAGAAGTAAATTTAATCAAAATTATCTTACCACGCTAGGTTGACAAGATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTAAATTTAATCAAAATTATCTTACCACGCTAGGTTGACAAGATA  793

seq1  GTCTCATTATATCATCCAGGCAGTCAGGTCGTATTTACTCTCTGCCCACC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATTATATCATCCAGGCAGTCAGGTCGTATTTACTCTCTGCCCACC  843

seq1  TTATTTCTCAGAGGAGTTTAGGATAAAGTACTCTATGTTCTCAGAAAGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTCAGAGGAGTTTAGGATAAAGTACTCTATGTTCTCAGAAAGAA  893

seq1  CATCTATATCCACACATTACTTTACGAATTTATAAAACTATATACTCAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATATCCACACATTACTTTACGAATTTATAAAACTATATACTCAAT  943

seq1  GACTAAATATTTTCCTCCCAATATCCCCTTCTTTTCTCCTTCTCAAACAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAATATTTTCCTCCCAATATCCCCTTCTTTTCTCCTTCTCAAACAT  993

seq1  ATCTGAAGATGAAGGAAGTTGAGCATTATCACACTGTTCTTTTAATTCAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGATGAAGGAAGTTGAGCATTATCACACTGTTCTTTTAATTCAC  1043

seq1  ACCCAGACTAAGAGTGCCTCAGTAACAGGGACATGTCCTGACAGTTACTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACTAAGAGTGCCTCAGTAACAGGGACATGTCCTGACAGTTACTC  1093

seq1  ATTTTCTTTATTATTGGCTTTCTTAATTCTTGGTCCTGACCAACACCCCC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTATTATTGGCTTTCTTAATTCTTGGTCCTGACCAACACCCCC  1143

seq1  TAGGTCTTCTTTAGTATCCTCATCACTACACACAATGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTCTTTAGTATCCTCATCACTACACACAATGAATTC  1185