BAC Information

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BAC

Clone NameB6Ng01-102N14
Chromosome6 (Build37)10 (Build37)
Map Location 18,834,077 - 18,834,59785,936,356 - 85,937,559
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102N14.bB6Ng01-102N14.g
ACCDH911621DH911622
length1,0461,185
definitionDH911621|Mus musculus domesticus DNA, BAC clone: B6Ng01-102N14, 5' end.DH911622|Mus musculus domesticus DNA, BAC clone: B6Ng01-102N14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,834,077 - 18,834,597)(85,936,356 - 85,937,559)
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacgcgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttttgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcaccactgagtttgattat
ttcctgccctctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttcttc
ttggagcactcagagctatgagtttccctctagaaatgcttcattgtgtc
ccataggtttggtacatgtggcttcatttcattaactctaaaagtc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaactcaggtgacagca
ttttctttaatggctgcaaaagtgcaaaaagcagtgacattgccacatac
ttgccactagagggcaggcgtggacacatcagattggaaaaccttttggc
tggcagtctcacaactaacttctcagagactgaggtgggaaaggggacta
ttgagaggatgaaaacaagtccacttggcaatagagcctgaggagggaca
atcgcagggtcataggctttgcatcaacttaggaagagctttgtggagtg
gaaagagtcatcccagagtggcatcagtccagagaagaaagcaggtgtct
gcttagatgtctcagaagatcttgagttcatttccttgctcacgatcagg
tagggctatgcacctgggttcccactctggaatctacctataaacctcat
aatttgacttctctgccccccccccataggattcagatacccactcattc
atcttgtcaatcctcctgtttagtcgacatgatccagcaaactgactcca
atggcagttctttcccaggataggtcttctctcaaacacattagttaaag
agcacagagtctcatctctctgatgttgacactgcctgacagaatcagtt
agcctgaagattgagctgatgggctctgctgcttccagttcacagtgtct
gggcaaagacatctcatctcacagtgcttgggtttctttgtttgcagaat
tcaggtgatagtctagtgtctacctcatggtgttcttttgagaagcagag
actaattaagtgtttaaacattatggcatttacgagcaccagtgtcccat
tagtatagattcttttttgacagccagcactagagcccacagttgctggg
atgctctgtggtgggggctgcagaatctgcattgacgagctcatctttta
gtaacaggctggaaccctcagactgcggatgaaagtagaccaggttacga
taaaggtgcttgaaatatttgtctctttaagttaacggagtgccaatgac
cttccgtgtatctagtctacgcgatggaacacgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18834077_18834597
seq2: B6Ng01-102N14.b_48_569 (reverse)

seq1  TAAACAGTCCCATATCACCTAAAGAAATAGAAGCAATTATTAATAGTCTC  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTC  50

seq1  CCAGCC-AAAAAAGCCCAGGATCAGACGGGTTTAGTGCAGAGTTCTATCA  99
      |||||| |||||||||||||| |||||| |||||||||||||||||||||
seq2  CCAGCCAAAAAAAGCCCAGGACCAGACGCGTTTAGTGCAGAGTTCTATCA  100

seq1  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAA  150

seq1  TAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACT  200

seq1  CTGATACCTAAACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACCTAAACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACC  250

seq1  AATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTTGCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTTGCTA  300

seq1  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  350

seq1  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  400

seq1  AATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  450

seq1  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  500

seq1  GTTTTGGAAAGATCAGGAATTC  521
      ||||||||||||||||||||||
seq2  GTTTTGGAAAGATCAGGAATTC  522

seq1: chr10_85936356_85937559
seq2: B6Ng01-102N14.g_68_1252

seq1  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGAGAT  100

seq1  TCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAACTCAGGTGACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAACTCAGGTGACAGCA  150

seq1  TTTTCTTTAATGGCTGCAAAAGTGCAAAAAGCAGTGACATTGCCACATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTAATGGCTGCAAAAGTGCAAAAAGCAGTGACATTGCCACATAC  200

seq1  TTGCCACTAGAGGGCAGGCGTGGACACATCAGATTGGAAAACCTTTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTAGAGGGCAGGCGTGGACACATCAGATTGGAAAACCTTTTGGC  250

seq1  TGGCAGTCTCACAACTAACTTCTCAGAGACTGAGGTGGGAAAGGGGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCTCACAACTAACTTCTCAGAGACTGAGGTGGGAAAGGGGACTA  300

seq1  TTGAGAGGATGAAAACAAGTCCACTTGGCAATAGAGCCTGAGGAGGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGGATGAAAACAAGTCCACTTGGCAATAGAGCCTGAGGAGGGACA  350

seq1  ATCGCAGGGTCATAGGCTTTGCATCAACTTAGGAAGAGCTTTGTGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGGGTCATAGGCTTTGCATCAACTTAGGAAGAGCTTTGTGGAGTG  400

seq1  GAAAGAGTCATCCCAGAGTGGCATCAGTCCAGAGAAGAAAGCAGGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTCATCCCAGAGTGGCATCAGTCCAGAGAAGAAAGCAGGTGTCT  450

seq1  GCTTAGATGTCTCAGAAGATCTTGAGTTCATTTCCTTGCTCACGATCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGATGTCTCAGAAGATCTTGAGTTCATTTCCTTGCTCACGATCAGG  500

seq1  TAGGGCTATGCACCTGGGTTCCCACTCTGGAATCTACCTATAAACCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTATGCACCTGGGTTCCCACTCTGGAATCTACCTATAAACCTCAT  550

seq1  AATTTGACTTCTCTGCCCCCCCCCCATAGGATTCAGATACCCACTCATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGACTTCTCTGCCCCCCCCCCATAGGATTCAGATACCCACTCATTC  600

seq1  ATCTTGTCAATCCTCCTGTTTAGTCGACATGATCCAGCAAACTGACTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCAATCCTCCTGTTTAGTCGACATGATCCAGCAAACTGACTCCA  650

seq1  ATGGCAGTTCTTTCCCAGGATAGGTCTTCTCTCAAACACATTAGTTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTTCTTTCCCAGGATAGGTCTTCTCTCAAACACATTAGTTAAAG  700

seq1  AGCACAGAGTCTCATCTCTCTGATGTTGACACTGCCTGACAGAATCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAGTCTCATCTCTCTGATGTTGACACTGCCTGACAGAATCAGTT  750

seq1  AGCCTGAAGATTGAGCTGATGGGCTCTGCTGCTTCCAGTTCACAGTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAAGATTGAGCTGATGGGCTCTGCTGCTTCCAGTTCACAGTGTCT  800

seq1  GGGCAAAGACATCTCATCTCACAGTGCTTGGGTTTCTTTGTTTGCAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAGACATCTCATCTCACAGTGCTTGGGTTTCTTTGTTTGCAGAAT  850

seq1  TCAGGTGATAGTCTAGTGTCTACCTCATGGTGTTCTTTTGAGAAGCAAGA  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCAGGTGATAGTCTAGTGTCTACCTCATGGTGTTCTTTTGAGAAGC-AGA  899

seq1  GACTAATTAAGGTGTTTAAAACATTATGGCATTAACGAGCAACCAGTGTC  950
      |||||||||| |||||| ||||||||||||||| |||||| |||||||||
seq2  GACTAATTAA-GTGTTT-AAACATTATGGCATTTACGAGC-ACCAGTGTC  946

seq1  CCATTAGTATAGATTCTTTTTTGACAGCCAGCACTAGGAGGCCCAACAGT  1000
      |||||||||||||||||||||||||||||||||||| |||  || |||||
seq2  CCATTAGTATAGATTCTTTTTTGACAGCCAGCACTA-GAG--CCCACAGT  993

seq1  GGCTGGGAAGGCTCTGTGGTGGGGGCTGCAGAATCTGCATTGGAACGAGC  1050
       |||||| | ||||||||||||||||||||||||||||||||  ||||||
seq2  TGCTGGG-ATGCTCTGTGGTGGGGGCTGCAGAATCTGCATTG--ACGAGC  1040

seq1  TCATC-TTTAGTAACA-GCTGGAAACACTCAGACTTGCGGGATGAAAGTA  1098
      ||||| |||||||||| ||||| ||| ||||||| ||| |||||||||||
seq2  TCATCTTTTAGTAACAGGCTGG-AACCCTCAGAC-TGC-GGATGAAAGTA  1087

seq1  GACCAAGTAAACGGTATTAAAGTGCTTTTGAAAATATTTGTCT-TTTAAG  1147
      ||||| ||  |||  || || ||||||    |||||||||||| ||||||
seq2  GACCAGGT-TACG--ATAAAGGTGCTT---GAAATATTTGTCTCTTTAAG  1131

seq1  TTAACAGGGAGTGCAATGGACTTTCTGGGTATCTAGTTCTACG-AATGTT  1196
      |||||  ||||||| |  ||| ||| | |||||||| ||||||  |||  
seq2  TTAAC--GGAGTGCCAATGACCTTCCGTGTATCTAG-TCTACGCGATG-G  1177

seq1  AACACGTT  1204
      ||||||||
seq2  AACACGTT  1185