BAC Information

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BAC

Clone NameB6Ng01-102O24
Chromosome6 (Build37)
Map Location 42,487,970 - 42,488,293
singlet/doubletsinglet
Overlap geneEG546896
Upstream geneTcrb-V13, Ephb6, Trpv6, Trpv5, 1700034O15Rik, Kel, Olfr459, Pip, Sval2, Sval1, Sval3, Sva, Tas2r139, Tas2r144, Gstk1, Tmem139, Casp2, Clcn1, 6330503C03Rik, Zyx, Epha1, Tas2r143, Tas2r135, Tas2r126, Olfr458, Olfr457, Olfr456, LOC232745
Downstream geneEapa2, BC011487, 3321401G04Rik, LOC100039918, GA_x5J8B7W6337-801345-802245, Olfr453, Olfr38, Olfr452, Olfr451-ps1, Olfr450, Olfr449, Olfr448, Olfr447, Olfr446, GA_x5J8B7W6337-1014614-1015483, Olfr444, EG622841, Igk-V, Olfr443-ps1, GA_x5J8B7W6337-1183223-1183810, Olfr441, Olfr440-ps1, GA_x5J8B7W6337-1221999-1222591, Olfr438, Olfr437, Olfr13, GA_x5J8B7W6337-1270568-1271367, Olfr435, Olfr434, LOC665745, Olfr47, Arhgef5, Nobox, Tpk1, LOC665747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O24.bB6Ng01-102O24.g
ACCDH911683DH911684
length986324
definitionDH911683|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O24, 5' end.DH911684|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatgttcagtatccttaatcatcaggg
aaatgcaaatcaaaacaaccctgagattccacctcacaccagtcagaatg
gctaggatcaaaaattcaggtgacagcagatgctggcgtggatgtggaga
aagaggaacactcctccattgctggtgggattgcaagcttgtacaatcac
tctggaaatcagtctggctgttcctcagaaaactaggcatagtactaccg
gtagatccagcaatacctctcctgggcatatatccagatgttccaactgg
taagaaggacacatgctccactatgttcatagcaccttatttataatagc
cagaagctggaaagaacccagatgcccctcaacagaagaatggataaaga
aaatgtggtacatttacaaaatggagagtactactgagttattaaaaaga
atgaatttatgaaattcctaggcaaatggatggacctggagggcatcaac
ctaagtgaggtaacccaatcacaaaagaactcacatgaaatgtactcact
gataagtggatattagcccagaaacttagaatacccaagatataggatac
aattgcgaagcacatgagactcaggaggaacgaagaccagggtgtggatg
ctttgccccttcttagaactgggagtggaaagcccatggagggagtttgc
agagacgacgttttgtagctgagatgaagggggtggaccttctagagact
gccattatccggggtatccatcccataatcaacctccaaacgctgacacc
attgcatacactaggtggggattttgctgaaaggaccctaaatatagctg
ttctcttgttgagaatatgctggggcctggcaaacacagaagttggatgc
tcacagtcagctattggatgtatcacagggcccccctatgaaggagctta
gagagaagtgcccagccagctgaaggggaactgcaa
ccaggagctgctccagatgcaaacactaaacactaggggacacttcagca
aatgagagttccctactctatcttggtctctgccagttatcagggctcac
acagaccctgatccacggaaccccaggaccctgtgaatggcagaagtgat
ctcccggttgcgcaggctgtagataagaggatatagaagtggtgtgacgt
tggtataaaccagcgctagtgtgcgatccagtcgaggggagtaactggat
tttggccgcacatacatgaaggtggcacaaccataatgcaggaaggtgac
agccaggtgtgaggcgcaggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_42487970_42488293
seq2: B6Ng01-102O24.g_72_395

seq1  CCAGGAGCTGCTCCAGATGCAAACACTAAACACTAGGGGACACTTCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCTGCTCCAGATGCAAACACTAAACACTAGGGGACACTTCAGCA  50

seq1  AATGAGAGTTCCCTACTCTATCTTGGTCTCTGCCAGTTATCAGGGCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGTTCCCTACTCTATCTTGGTCTCTGCCAGTTATCAGGGCTCAC  100

seq1  ACAGACCCTGATCCACGGAACCCCAGGACCCTGTGAATGGCAGAAGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCCTGATCCACGGAACCCCAGGACCCTGTGAATGGCAGAAGTGAT  150

seq1  CTCCCGGTTGCGCAGGCTGTAGATAAGAGGATATAGAAGTGGTGTGACGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGGTTGCGCAGGCTGTAGATAAGAGGATATAGAAGTGGTGTGACGT  200

seq1  TGGTATAAACCAGCGCTAGTGTGCGATCCAGTCGAGGGGAGTAACTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAAACCAGCGCTAGTGTGCGATCCAGTCGAGGGGAGTAACTGGAT  250

seq1  TTTGGCCGCACATACATGAAGGTGGCACAACCATAATGCAGGAAGGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCGCACATACATGAAGGTGGCACAACCATAATGCAGGAAGGTGAC  300

seq1  AGCCAGGTGTGAGGCGCAGGTGGA  324
      ||||||||||||||||||||||||
seq2  AGCCAGGTGTGAGGCGCAGGTGGA  324