BAC Information

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BAC

Clone NameB6Ng01-103D15
Chromosome6 (Build37)
Map Location 61,521,237 - 61,522,252
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneSnca, ENSMUSG00000064018, Mmrn1, LOC100041756, LOC100041764, LOC100042694
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103D15.g
ACCDH911886
length1,010
definitionDH911886|Mus musculus domesticus DNA, BAC clone: B6Ng01-103D15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgaaagaactccataaaatatttaaaaccttgtacaagag
ttgaacttctaattaaaacagaattcattaatctgaaatatattcaaatt
tggtgatgaaattgcacttaaaaatgaaaatcctggccttagagaacagg
aagtggataatatttcttaaaagtatctatgagaatgtcccttctgagca
ctgaagcctgttgatcacatggccccacttacacagtgttctgaaagaag
ttggcacaaacatggaattactgcttacaaggctgcacctgtaaggatct
gttctctttcgttttgcttgatgaggaacccagacagaaggataaaacat
tctctgtaaattcaaagtagtaaatacagagtccacagtggcaatcacaa
gtacgtgggatcataaacttcagtatgccagaaagctatgaaacacatct
cttgccatttctcctcattctcttctcacaggtattgatttcttactaaa
aatcctgaccaacaagacgtagaaagtggaagagttaaatgttataaact
ttgggattagtagcttttaatttatcagattttattgtttttgttgtttg
cagagggaaatactgccggatcataaaagatgctggagagttttctaact
taatcattcaggcacagaaaaacaaacatattaacaacccagagtttgtt
ttagtcgctcatgaaggggcatgggagcaaacattttaaatatatttggc
ctgcaaaaacttgttgaaagcttcaatatacagtgttttctagtttctta
aatagatatccccatataaatgattaatataaatgaaaaagatatagaga
cgcttgatccaggataatttaaaacagtgggtgtgaaaggattcaagaag
ctgacagaggccaatgtattcacaagacatttcataacacctggcaactt
gagagactgggatgatatgatcgagaaaatcacttttaaaaccgctctat
actaccatat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_61521237_61522252
seq2: B6Ng01-103D15.g_70_1079 (reverse)

seq1  ATATGGTAGTATAGAGGCAGGTTTTTAAAAGTGATTTTTCTCTGATCATA  50
      ||||||||||||||||    | |||||||||||| ||||||| |||||| 
seq2  ATATGGTAGTATAGAG---CGGTTTTAAAAGTGA-TTTTCTC-GATCAT-  44

seq1  ATCATCCCAGTCTACTCAAGTTTGCAGGTGTTAATGAAATGTCTTGTGAA  100
      ||||||||||||| ||||||||  |||||||| |||||||||||||||||
seq2  ATCATCCCAGTCT-CTCAAGTTGCCAGGTGTT-ATGAAATGTCTTGTGAA  92

seq1  TACATTTGGCCTCTGTCAGCCTCTTGGAATCCTTTCACACCCACTGGTTT  150
      |||| ||||||||||||||| |||| ||||||||||||||||||| ||||
seq2  TACA-TTGGCCTCTGTCAGCTTCTT-GAATCCTTTCACACCCACT-GTTT  139

seq1  TATATTATCCTGTATC-AGCGTCTCTATATCTTTTTCATTTATATTAATC  199
      || ||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  TAAATTATCCTGGATCAAGCGTCTCTATATCTTTTTCATTTATATTAATC  189

seq1  AATTATATGGGGATATCTATTTAAGAAACTAGAAAACACTGTATATTGAA  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATGGGGATATCTATTTAAGAAACTAGAAAACACTGTATATTGAA  239

seq1  GCTTTCAACAAGTTTTTGCAGGCCAAATATATTT-AAATGTTTGCTACCA  298
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  GCTTTCAACAAGTTTTTGCAGGCCAAATATATTTAAAATGTTTGCTCCCA  289

seq1  TGCCCCTTCATGAGCGACTAAAACAAACTCTGGGTTGTTAATATG-TTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCCCCTTCATGAGCGACTAAAACAAACTCTGGGTTGTTAATATGTTTGT  339

seq1  TTTTCTGTGCCTGAATGATTAAGTTAG-AAACTCTCCAGCATC-TTTATG  395
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TTTTCTGTGCCTGAATGATTAAGTTAGAAAACTCTCCAGCATCTTTTATG  389

seq1  ATCCGGCAGTATTTCCCTCTGCAAACAACAAAAACAATAAAATCTGATAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGGCAGTATTTCCCTCTGCAAACAACAAAAACAATAAAATCTGATAA  439

seq1  ATTAAAAGCTACTAATCCCAAAGTTTATAACATTTAACTCTTCCACTTTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGCTACTAATCCCAAAGTTTATAACATTTAACTCTTCCACTTTC  489

seq1  TACGTCTTGTTGGTCAGGATTTTTAGTAAGAAATCAATACCTGTGAGAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTCTTGTTGGTCAGGATTTTTAGTAAGAAATCAATACCTGTGAGAAG  539

seq1  AGAATGAGGAGAAATGGCAAGAGATGTGTTTCATAGCTTTCTGGCATACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGGAGAAATGGCAAGAGATGTGTTTCATAGCTTTCTGGCATACT  589

seq1  GAAGTTTATGATCCCACGTACTTGTGATTGCCACTGTGGACTCTGTATTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTATGATCCCACGTACTTGTGATTGCCACTGTGGACTCTGTATTT  639

seq1  ACTACTTTGAATTTACAGAGAATGTTTTATCCTTCTGTCTGGGTTCCTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTGAATTTACAGAGAATGTTTTATCCTTCTGTCTGGGTTCCTCA  689

seq1  TCAAGCAAAACGAAAGAGAACAGATCCTTACAGGTGCAGCCTTGTAAGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAAAACGAAAGAGAACAGATCCTTACAGGTGCAGCCTTGTAAGCA  739

seq1  GTAATTCCATGTTTGTGCCAACTTCTTTCAGAACACTGTGTAAGTGGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCCATGTTTGTGCCAACTTCTTTCAGAACACTGTGTAAGTGGGGC  789

seq1  CATGTGATCAACAGGCTTCAGTGCTCAGAAGGGACATTCTCATAGATACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATCAACAGGCTTCAGTGCTCAGAAGGGACATTCTCATAGATACT  839

seq1  TTTAAGAAATATTATCCACTTCCTGTTCTCTAAGGCCAGGATTTTCATTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAATATTATCCACTTCCTGTTCTCTAAGGCCAGGATTTTCATTT  889

seq1  TTAAGTGCAATTTCATCACCAAATTTGAATATATTTCAGATTAATGAATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGCAATTTCATCACCAAATTTGAATATATTTCAGATTAATGAATT  939

seq1  CTGTTTTAATTAGAAGTTCAACTCTTGTACAAGGTTTTAAATATTTTATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAATTAGAAGTTCAACTCTTGTACAAGGTTTTAAATATTTTATG  989

seq1  GAGTTCTTTCATAGTGAATTC  1016
      |||||||||||||||||||||
seq2  GAGTTCTTTCATAGTGAATTC  1010