BAC Information

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BAC

Clone NameB6Ng01-104I23
Chromosome6 (Build37)
Map Location 139,159,401 - 139,160,353
singlet/doubletsinglet
Overlap genenone
Upstream geneLmo3, Igbp1b, EG668196
Downstream geneEG632971, LOC100043898, Pik3c2g, Plcz1, Capza3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104I23.bB6Ng01-104I23.g
ACCDH912822DH912823
length1,171957
definitionDH912822|Mus musculus domesticus DNA, BAC clone: B6Ng01-104I23, 5' end.DH912823|Mus musculus domesticus DNA, BAC clone: B6Ng01-104I23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttcgctctgagccccattttttaatggggttattggatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaatgatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagcttca
tgaggtcccatttgtcaattctctagatcttacagcacaagccattgctg
ttctattcaggaatatttcccctgtgccaatatcttcaaggctttccccc
actttctcctctataagtttcagtgtctctggttttatgtggagctcctt
gagccacttagatttgaccttagtacaaggagataggaatggattgattc
gcattcgtctacatgataaccaccagttgtgccaaaaccatttgttgaaa
atgctgtcttttttccactggatggttttagctcccttgtcgaagatcaa
gtgacaaataggtgtgtgggttcatttctgggtcttcaattctattccat
tggtctacttgtctgtcactataccagtaccatgtagtttttatcacaat
tgctctgtagtaaagctttaggtcaggcatggtgattctatcagaggttc
ttttatccttgagaagagtttttgctatcctaggttttttgttattccag
atgaatttgcagattgctctttctaattcattgaaagaattgagttggaa
ttttgatggggattgcattgaatctgtagattgcttttggcaagacagcc
atttgttgatcctgccaatccatgaacttgaacttcttatcatacagatc
tttcacttccttagttagagtcacgccaatatattttatattatttgtga
ctattgaaaagtgtgttgtttccctaatttctttctcagcctgtttattc
tttggtgtagagaaaggccattggacttgtttgaagttaattttatatcc
agctacttcactggaagcttgtttaattagggttaggaggtcctctgggg
gaattttagggtcccttgattaattacactatcatatcatctgccaaaag
tggaatttgtgaattcccccttttccaattgtgtaccccttggatatccc
tttttgtgtgcctaatgggct
gaattctagccatccaccacgtggcccccagcccctaaaatttttatgac
tgccacgggaattcaatgtgaaacaatttgtgttacttaaagtgtaaaac
tcacatgatcatttgacatttgagatatctccatcttataatctttgatg
taaaaatattgttatttttcttgaaaatattgaaccaaactgattgccaa
ttatatttttctcaagcttatatttcttaggttcttgaacccatttagaa
attttccgtatatagaatcaacattaacttgattttacatgtgacagaag
gcacagcagccaatctccaaacagtatcttttatgttttatgcataaaat
cattctgacaaactgcatcagtgaaacaaaggaaaatacattgtaaaaca
aaggcttatattcacctatgtacaaaccttttattcggtgttattaagca
gcaacagtaatcctcttctcaaaatactaagcaaaaacaatatcacccat
atccacttcaactcaatattgtctaatttacctaagaggtctgcagagct
tttcacatcatgatctctatggaaatgtttatggaaatagggcattttgt
gtgtgtgtgtgtgtgtgtgtgtttctaatagatagcaatttgttatgttt
aaaagtagatcatgcattaatggatgtaaatcaacattacaatatcaaaa
tattttaaaggacaaatgctgaatatgtttctgctataattagacatatc
tctttacataaacgcaaagttactttatgtaattagagagaacactttcc
catgtaagtaaaataataaacatggaaatagaaggtgatttaaatttatc
agaatatattaaattcaggcgttaggttaaaaaaagacacaacataataa
tttaaagattatgtttaattcttaccacattttaaatttggttgggggtg
tatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_139159401_139160353
seq2: B6Ng01-104I23.g_68_1024 (reverse)

seq1  ATATATACACACACAACCAAATATAAAATGTTGTAAGAATTTAGAACAAA  50
      |||||||||| | ||||||||| |||||||| |||||||||   |||| |
seq2  ATATATACACCCCCAACCAAATTTAAAATGTGGTAAGAATT--AAACATA  48

seq1  TCCTTTAAATTATTTTGTTGTGTCTTTTTTTAACCTAACACCT-AATTTA  99
        |||||||||||| |||||||||||||||||||||||| ||| ||||||
seq2  ATCTTTAAATTATTATGTTGTGTCTTTTTTTAACCTAACGCCTGAATTTA  98

seq1  ATATATTCTGATAAATTTTAAATCACCTTCTA-TTCCATGTTTATTATTT  148
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  ATATATTCTGATAAA-TTTAAATCACCTTCTATTTCCATGTTTATTATTT  147

seq1  TACTTACAT-GGAAAGTGTTCTCTCTAATTACATAAAGTAACTTTGCGTT  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACATGGGAAAGTGTTCTCTCTAATTACATAAAGTAACTTTGCGTT  197

seq1  TATGT-AAGAGATATGTCTAA-TATAGCAGAAACATATTCAGCATTTGT-  244
      ||||| ||||||||||||||| ||||||||||||||||||||||||||| 
seq2  TATGTAAAGAGATATGTCTAATTATAGCAGAAACATATTCAGCATTTGTC  247

seq1  CTTTAAAATA-TTTGATATTGTAATGTTGATTTACATCCATTAATGCATG  293
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATATTTTGATATTGTAATGTTGATTTACATCCATTAATGCATG  297

seq1  ATCTACTTTTAAACATAACAAATTGCTATCTATTAGAAACACACACACAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTTTAAACATAACAAATTGCTATCTATTAGAAACACACACACAC  347

seq1  ACACACACACACAAAATGCCCTATTTCCATAAACATTTCCATAGAGATCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAAAATGCCCTATTTCCATAAACATTTCCATAGAGATCA  397

seq1  TGATGTGAAAAGCTCTGCAGACCTCTTAGGTAAATTAGACAATATTGAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAAAAGCTCTGCAGACCTCTTAGGTAAATTAGACAATATTGAGT  447

seq1  TGAAGTGGATATGGGTGATATTGTTTTTGCTTAGTATTTTGAGAAGAGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGATATGGGTGATATTGTTTTTGCTTAGTATTTTGAGAAGAGGA  497

seq1  TTACTGTTGCTGCTTAATAACACCGAATAAAAGGTTTGTACATAGGTGAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTGCTGCTTAATAACACCGAATAAAAGGTTTGTACATAGGTGAA  547

seq1  TATAAGCCTTTGTTTTACAATGTATTTTCCTTTGTTTCACTGATGCAGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCCTTTGTTTTACAATGTATTTTCCTTTGTTTCACTGATGCAGTT  597

seq1  TGTCAGAATGATTTTATGCATAAAACATAAAAGATACTGTTTGGAGATTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAATGATTTTATGCATAAAACATAAAAGATACTGTTTGGAGATTG  647

seq1  GCTGCTGTGCCTTCTGTCACATGTAAAATCAAGTTAATGTTGATTCTATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTGCCTTCTGTCACATGTAAAATCAAGTTAATGTTGATTCTATA  697

seq1  TACGGAAAATTTCTAAATGGGTTCAAGAACCTAAGAAATATAAGCTTGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGAAAATTTCTAAATGGGTTCAAGAACCTAAGAAATATAAGCTTGAG  747

seq1  AAAAATATAATTGGCAATCAGTTTGGTTCAATATTTTCAAGAAAAATAAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAATTGGCAATCAGTTTGGTTCAATATTTTCAAGAAAAATAAC  797

seq1  AATATTTTTACATCAAAGATTATAAGATGGAGATATCTCAAATGTCAAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTACATCAAAGATTATAAGATGGAGATATCTCAAATGTCAAAT  847

seq1  GATCATGTGAGTTTTACACTTTAAGTAACACAAATTGTTTCACATTGAAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGTGAGTTTTACACTTTAAGTAACACAAATTGTTTCACATTGAAT  897

seq1  TCCCGTGGCAGTCATAAAAATTTTAGGGGCTGGGGGCCACGTGGTGGATG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGGCAGTCATAAAAATTTTAGGGGCTGGGGGCCACGTGGTGGATG  947

seq1  GCTAGAATTC  953
      ||||||||||
seq2  GCTAGAATTC  957