MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-105K17
Chromosome	6 (Build37)
Map Location	5,356,396 - 5,494,200
singlet/doublet	doublet
Overlap gene	Asb4, Pdk4
Upstream gene	Col1a2, Casd1, Sgce, Peg10, LOC100040018, Ppp1r9a, Pon1, Pon3, Pon2
Downstream gene	Dync1i1, Slc25a13, EG667462, EG667468, LOC667471, LOC100040096
Link	Open Mouse BAC browser

Click to get alignment info.

name	Col1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12843 MGI:88468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213819 MGI:2384865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20392 MGI:1329042
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Peg10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170676 MGI:2157785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040018 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 10 Proteins

name	Ppp1r9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243725 MGI:2442401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18979 MGI:103295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269823 MGI:106686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pon2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330260 MGI:106687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65255 MGI:1929751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27273 MGI:1351481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dync1i1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13426 MGI:107743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667468 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins pseudo : _no_value

name	LOC667471 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins pseudo : _no_value

name	LOC100040096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Col1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111120328 GeneID:12843 MGI:88468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type I, alpha 2 transcript_id : NM_007743.2

name	Casd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37620156 GeneID:213819 MGI:2384865
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CAS1 domain containing 1 transcript_id : NM_145398.2

name	Sgce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981493 GeneID:20392 MGI:1329042
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcoglycan, epsilon transcript_id : NM_011360.2

name	Peg10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98985811 GeneID:170676 MGI:2157785
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : paternally expressed 10 transcript_id : NM_001040611.1

name	LOC100040018 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254836 GeneID:100040018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 10 Proteins product : similar to Chain A, Crystal Structure Of Glia Maturation Factor-Gamma (Gmfg) From Mus Musculus At 1.50 A Resolution transcript_id : XM_001473951.1

name	Ppp1r9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130685 GeneID:243725 MGI:2442401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 9A transcript_id : NM_181595.3

name	Pon1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352560 GeneID:18979 MGI:103295
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 1 transcript_id : NM_011134.2

name	Pon3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370509 GeneID:269823 MGI:106686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 3 transcript_id : NM_173006.1

name	Pon2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130746 GeneID:330260 MGI:106687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paraoxonase 2 transcript_id : NM_183308.2

name	Asb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637818 GeneID:65255 MGI:1929751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 4 transcript_id : NM_023048.5

name	Pdk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130875 GeneID:27273 MGI:1351481
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyruvate dehydrogenase kinase, isoenzyme 4 transcript_id : NM_013743.2

name	Dync1i1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802700 GeneID:13426 MGI:107743
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 1 intermediate chain 1 transcript_id : NM_010063.2

name	Slc25a13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131091 GeneID:50799 MGI:1354721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 transcript_id : NM_015829.2

name	EG667462 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254838 GeneID:667462 MGI:3644294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG667462 transcript_id : XM_990672.2

name	LOC100040096 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254841 GeneID:100040096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040096 transcript_id : XM_001474083.1

name	Col1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111120329 GeneID:12843 MGI:88468
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 note : osteogenesis imperfecta; collagen COL1A2 product : procollagen, type I, alpha 2 protein_id : NP_031769.2

name	Casd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37620157 CCDS:CCDS19896.1 GeneID:213819 MGI:2384865
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : O-acetyltransferase protein_id : NP_663373.2

name	Sgce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981494 GeneID:20392 MGI:1329042
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0016012 - sarcoglycan complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : epsilon-Sarcoglycan splicing variant 3A product : sarcoglycan, epsilon protein_id : NP_035490.2

name	Peg10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:98985812 GeneID:170676 MGI:2157785
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform RF1 is encoded by transcript variant 1; MyEF-3 like; embryonal carcinoma differentiation regulated product : paternally expressed 10 isoform RF1 protein_id : NP_001035701.1

name	LOC100040018 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254837 GeneID:100040018
definition	codon_start : 1 product : similar to Chain A, Crystal Structure Of Glia Maturation Factor-Gamma (Gmfg) From Mus Musculus At 1.50 A Resolution protein_id : XP_001474001.1

name	Ppp1r9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31711997 CCDS:CCDS19897.1 GeneID:243725 MGI:2442401
definition	GO_component : GO:0030864 - cortical actin cytoskeleton [Evidence IDA]; GO:0043197 - dendritic spine [Evidence IDA]; GO:0030175 - filopodium [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IPI] codon_start : 1 note : neurabin; neural tissue-specific F-actin binding protein; Neurabin I product : protein phosphatase 1, regulatory (inhibitor) subunit 9A protein_id : NP_853626.1

name	Pon1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242183 CCDS:CCDS19898.1 GeneID:18979 MGI:103295
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004063 - aryldialkylphosphatase activity [Evidence IEA]; GO:0004064 - arylesterase activity [Evidence IMP]; GO:0008035 - high-density lipoprotein binding [Evidence TAS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence TAS] [Evidence IMP]; GO:0008015 - circulation [Evidence TAS]; GO:0009636 - response to toxin [Evidence IMP] codon_start : 1 exception : mismatches in translation product : paraoxonase 1 protein_id : NP_035264.1

name	Pon3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370510 CCDS:CCDS19899.1 GeneID:269823 MGI:106686
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004064 - arylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : paraoxonase 3 protein_id : NP_766594.1

name	Pon2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34303979 CCDS:CCDS19900.1 GeneID:330260 MGI:106687
definition	EC_number : 3.1.1.2 EC_number : 3.1.8.1 GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004063 - aryldialkylphosphatase activity [Evidence IEA]; GO:0004064 - arylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : paraoxonase 2 protein_id : NP_899131.1

name	Asb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17505202 CCDS:CCDS19901.1 GeneID:65255 MGI:1929751
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 4 protein_id : NP_075535.1

name	Pdk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305375 CCDS:CCDS19902.1 GeneID:27273 MGI:1351481
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004712 - protein threonine/tyrosine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA] GO_process : GO:0006086 - acetyl-CoA biosynthesis from pyruvate [Evidence TAS]; GO:0016310 - phosphorylation [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : pyruvate dehydrogenase kinase 4 protein_id : NP_038771.1

name	Dync1i1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753656 CCDS:CCDS19903.1 GeneID:13426 MGI:107743
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dynein, cytoplasmic, intermediate chain 1 protein_id : NP_034193.1

name	Slc25a13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657583 GeneID:50799 MGI:1354721
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] [Evidence TAS]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005313 - L-glutamate transporter activity [Evidence IMP] GO_process : GO:0015810 - aspartate transport [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : citrin product : solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 protein_id : NP_056644.1

name	EG667462 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254839 GeneID:667462 MGI:3644294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_995766.2

name	LOC100040096 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254842 GeneID:100040096
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474133.1

name	(CDS detail)
type	STS
link
xref	UniSTS:213525
definition	standard_name : RH130238

name	(CDS detail)
type	STS
link
xref	UniSTS:116318
definition	standard_name : D6Mit86

name	(CDS detail)
type	STS
link
xref	UniSTS:116581
definition	standard_name : D6Mit84

name	(CDS detail)
type	STS
link
xref	UniSTS:116319
definition	standard_name : D6Mit138

name	(CDS detail)
type	STS
link
xref	UniSTS:265065
definition	standard_name : Col1a2

name	(CDS detail)
type	STS
link
xref	UniSTS:155082
definition	standard_name : GDB:180350

name	(CDS detail)
type	STS
link
xref	UniSTS:151144
definition	standard_name : D7S2150E

name	(CDS detail)
type	STS
link
xref	UniSTS:154850
definition	standard_name : GDB:177260

name	(CDS detail)
type	STS
link
xref	UniSTS:159478
definition	standard_name : AA960264

name	(CDS detail)
type	STS
link
xref	UniSTS:159479
definition	standard_name : AF031919

name	(CDS detail)
type	STS
link
xref	UniSTS:144397
definition	standard_name : Sgce

name	(CDS detail)
type	STS
link
xref	UniSTS:489595
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:479194
definition	standard_name : Peg10

name	(CDS detail)
type	STS
link
xref	UniSTS:273401
definition	standard_name : PMC60235P1

name	(CDS detail)
type	STS
link
xref	UniSTS:271847
definition	standard_name : PMC197179P1

name	(CDS detail)
type	STS
link
xref	UniSTS:162504
definition	standard_name : RH125750

name	(CDS detail)
type	STS
link
xref	UniSTS:159480
definition	standard_name : AI324845

name	(CDS detail)
type	STS
link
xref	UniSTS:235381
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:273730
definition	standard_name : Ppp1r9a

name	(CDS detail)
type	STS
link
xref	UniSTS:185652
definition	standard_name : BB181831

name	(CDS detail)
type	STS
link
xref	UniSTS:144238
definition	standard_name : Pon1

name	(CDS detail)
type	STS
link
xref	UniSTS:125724
definition	standard_name : U32684

name	(CDS detail)
type	STS
link
xref	UniSTS:144236
definition	standard_name : Pon1

name	(CDS detail)
type	STS
link
xref	UniSTS:271848
definition	standard_name : PMC197179P2

name	(CDS detail)
type	STS
link
xref	UniSTS:165448
definition	standard_name : AI786302

name	(CDS detail)
type	STS
link
xref	UniSTS:271849
definition	standard_name : PMC197179P3

name	(CDS detail)
type	STS
link
xref	UniSTS:179333
definition	standard_name : AI481612

name	(CDS detail)
type	STS
link
xref	UniSTS:144239
definition	standard_name : Pon2

name	(CDS detail)
type	STS
link
xref	UniSTS:116577
definition	standard_name : D6Mit166

name	(CDS detail)
type	STS
link
xref	UniSTS:125339
definition	standard_name : MHAa7b6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:265592
definition	standard_name : Asb4

name	(CDS detail)
type	STS
link
xref	UniSTS:165449
definition	standard_name : AV117194

name	(CDS detail)
type	STS
link
xref	UniSTS:179334
definition	standard_name : AW060255

name	(CDS detail)
type	STS
link
xref	UniSTS:179332
definition	standard_name : AV005916

name	(CDS detail)
type	STS
link
xref	UniSTS:163381
definition	standard_name : AJ001418

name	(CDS detail)
type	STS
link
xref	UniSTS:116579
definition	standard_name : D6Mit179

name	(CDS detail)
type	STS
link
xref	UniSTS:130846
definition	standard_name : D6Mit296

name	(CDS detail)
type	STS
link
xref	UniSTS:116578
definition	standard_name : RH90722

name	(CDS detail)
type	STS
link
xref	UniSTS:124217
definition	standard_name : 37.MMHAP14FLE4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:5464
definition	standard_name : RH46992

name	(CDS detail)
type	STS
link
xref	UniSTS:164309
definition	standard_name : AI785475

name	(CDS detail)
type	STS
link
xref	UniSTS:179331
definition	standard_name : AW108044

name	(CDS detail)
type	STS
link
xref	UniSTS:167488
definition	standard_name : RH127277

name	EG667468 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254858 GeneID:667468 MGI:3644257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 10 Proteins product : predicted gene, EG667468 pseudo : _no_value transcript_id : XR_032062.1

name	LOC667471 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254840 GeneID:667471
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 42 Proteins product : similar to heterogeneous nuclear ribonucleoprotein A1 pseudo : _no_value transcript_id : XR_031544.1

clone name	MSMg01-439G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344J10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-105K17.b	B6Ng01-105K17.g
ACC	DH913626	DH913627
length	1,038	1,058
definition	DH913626\|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K17, 5' end.	DH913627\|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K17, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,356,396 - 5,357,434)	(5,493,134 - 5,494,200)
sequence	gaattctttcctgctttttaaagtcttttttttttgtgtgaatttttgtc atttgaatattagttccctggctttactcttgcgcctgccttttgctgat ttcctgccctggataggttttacctttgtgctttctttctggattgtctt agaatccttggctgcctctctgtatgtaagatggaatgactgaatttcaa gtaaagtctatacattattagcttcactcactctacaagatttggctaga ttagtcattcaaattttttttttactggttagattctccaaaggaaaaat ctggcttcttcctagaggttcaaggtagaattgctagtattctcggtgat gggtcacaggtagtgcaaccacagtaaatctacctccactctgggatatt accctctcctttttacagtgctaaaagctactcctgtgtgagccttgaaa atagccttccattctgaagtccattttccatgcgcaccattacagctgcg tgttatgttccatactcccatcagacattgttaggctttcataggacatt gtcattttcttttatcatacttatctttgcttagttctttgattactgtc tacttgtgggtttcaggaggacggatctttcccccagcatagctaaatgc acagtagtaccttctgcatggtgactgtcaagtctatattaaatcttcaa gggctagtgcttgagggaccagtgcacttaaaaccttgccagtaccttgc cagtaccagtaccggaacagttgtattcagtttttgggattattgcattt atttctttcccatgagaatttacttgccagacagagaagccagagacatc cagtgttcctaggagatacagtgagttggggataggagatctctgttgat cttggtgtcacggacggtgtttaatactgcaaaattgagagacaggacca aaactggaggtattggatggctaaaagcgaggtgaaaaaacttttaaagt attatggagggtccggcagaaggagatcctcctttttt	gaattcacgcactgcatactaatgtggcctctaacatgttgtaagtgagc aattaaacatggaaaaagaaagatgctttcctaaaaagaaaagcatacat gttagtaaatgagtgttacagtgattatttttttactaactagtaaaaca attgatatttggcttaattatgacatttaagtcctactatcaatttttta aaggtcatctgtaaagctggggaaatagtatttctaccattatttatagt agtgaaaagttggaaacaatcttaataatacatcacatgtgtcaagttaa gtaaattatagtacatgagtttcataactgttaaaaaattacaaaatgaa gaatactaaaatgcatgggacaacaaaatggaaaacatttatggtatctt gttcagaacagaatttcccaactccaatcctactaacatcttgggtcaag atattcaggttgggcttggggctgctatatgccttatgggatattcagca acatcactggtctccatgcactgcatataacaacaacaacaacaacaaca acaacaagaacaacaaaatatctttcaatcctgccaaaatgcttgggtaa tgaattggaatgaggactatgctgctggctgagaaactctataaaaggtg aaattaaatgtaaaacgccctttatattgtgattaaatacaaggaaaatg agcatgttcctatgtctgcctagtaaataaacagcacaaacatcaaatca tttattaaggtgctggtatttcttaatggtttcttttgtataggttctgt cgtggttttcaatgagaatggcccctataggactccgttttgaatgcctg ggttacctagttagtagagtgtttagataaattataaaatgagacttttg tgcggagaagaaagtatatcactggggttgggctttgatgttcaaactca caccaagcccagtttcggctcatctgctataatttgtgatcagatgaaac ttccagctactactcagtctgggactacttgcctgctacatgttttccac atgatggc
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr6_5356396_5357434
seq2: B6Ng01-105K17.b_43_1080

seq1  GAATTCTTTCCTGCTTTTTAAAGTCTTTTTTTTTTGTGTGAATTTTTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGCTTTTTAAAGTCTTTTTTTTTTGTGTGAATTTTTGTC  50

seq1  ATTTGAATATTAGTTCCCTGGCTTTACTCTTGCGCCTGCCTTTTGCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATATTAGTTCCCTGGCTTTACTCTTGCGCCTGCCTTTTGCTGAT  100

seq1  TTCCTGCCCTGGATAGGTTTTACCTTTGTGCTTTCTTTCTGGATTGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCCTGGATAGGTTTTACCTTTGTGCTTTCTTTCTGGATTGTCTT  150

seq1  AGAATCCTTGGCTGCCTCTCTGTATGTAAGATGGAATGACTGAATTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTTGGCTGCCTCTCTGTATGTAAGATGGAATGACTGAATTTCAA  200

seq1  GTAAAGTCTATACATTATTAGCTTCACTCACTCTACAAGATTTGGCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTCTATACATTATTAGCTTCACTCACTCTACAAGATTTGGCTAGA  250

seq1  TTAGTCATTCAAATTTTTTTTTTACTGGTTAGATTCTCCAAAGGAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCATTCAAATTTTTTTTTTACTGGTTAGATTCTCCAAAGGAAAAAT  300

seq1  CTGGCTTCTTCCTAGAGGTTCAAGGTAGAATTGCTAGTATTCTCGGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCTTCCTAGAGGTTCAAGGTAGAATTGCTAGTATTCTCGGTGAT  350

seq1  GGGTCACAGGTAGTGCAACCACAGTAAATCTACCTCCACTCTGGGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACAGGTAGTGCAACCACAGTAAATCTACCTCCACTCTGGGATATT  400

seq1  ACCCTCTCCTTTTTACAGTGCTAAAAGCTACTCCTGTGTGAGCCTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCCTTTTTACAGTGCTAAAAGCTACTCCTGTGTGAGCCTTGAAA  450

seq1  ATAGCCTTCCATTCTGAAGTCCATTTTCCATGCGCACCATTACAGCTGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTCCATTCTGAAGTCCATTTTCCATGCGCACCATTACAGCTGCG  500

seq1  TGTTATGTTCCATACTCCCATCAGACATTGTTAGGCTTTCATAGGACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTTCCATACTCCCATCAGACATTGTTAGGCTTTCATAGGACATT  550

seq1  GTCATTTTCTTTTATCATACTTATCTTTGCTTAGTTCTTTGATTACTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCTTTTATCATACTTATCTTTGCTTAGTTCTTTGATTACTGTC  600

seq1  TACTTGTGGGTTTCAGGAGGACGGATCTTTCCCCCAGCATAGCTAAATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTGGGTTTCAGGAGGACGGATCTTTCCCCCAGCATAGCTAAATGC  650

seq1  ACAGTAGTACCTTCTGCATGGTGACTGTCAAGTCTATATTAAATCTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTACCTTCTGCATGGTGACTGTCAAGTCTATATTAAATCTTCAA  700

seq1  GGGCTAGTGCTTGAGGGACCAGTGCACTTAAAACCTTGCCAGTACCTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGTGCTTGAGGGACCAGTGCACTTAAAACCTTGCCAGTACCTTGC  750

seq1  CAGTACCAGTACCGGAACAGTTGTATTCAGTTTTT-GGATTATTGCATTT  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGTACCAGTACCGGAACAGTTGTATTCAGTTTTTGGGATTATTGCATTT  800

seq1  ATTTCTTTCCCATGAGAATTTACTTGCCAGACAGAGAAGCCAGAGACATC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCCCATGAGAATTTACTTGCCAGACAGAGAAGCCAGAGACATC  850

seq1  CAGTGTTCCTAGGAGATACAGTGAGTTGGGGATTAGGAGATCTCTGTTGA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGTGTTCCTAGGAGATACAGTGAGTTGGGGA-TAGGAGATCTCTGTTGA  899

seq1  TC-TGGTGTCACGGACGGTGTTAAATACTGCAAAAATTGAGAGACAGGAA  948
      || ||||||||||||||||||| |||||||| ||||||||||||||||| 
seq2  TCTTGGTGTCACGGACGGTGTTTAATACTGC-AAAATTGAGAGACAGGAC  948

seq1  CAAAACTGAAGATATT-GATGGCTAAAAGCGAGGTGAAAAAACTTTTAAA  997
      |||||||| || |||| ||||||||||||||||||||||||||||||  |
seq2  CAAAACTGGAGGTATTGGATGGCTAAAAGCGAGGTGAAAAAACTTTT--A  996

seq1  AAGTATTATGAAGGGTCGGCAAGAGGGAGATTCTTCTTTTTT  1039
      |||||||||| |||||| |  ||| |||||| || |||||||
seq2  AAGTATTATGGAGGGTCCGGCAGAAGGAGATCCTCCTTTTTT  1038

seq1: chr6_5493134_5494200
seq2: B6Ng01-105K17.g_68_1125 (reverse)

seq1  GCCATCATGGTGGGAAACATGGTAGCAGGCAAGTAGTCACAGGACTGGAG  50
      |||||||| |||| |||||| ||||||||||||||||| || |||| |||
seq2  GCCATCAT-GTGGAAAACAT-GTAGCAGGCAAGTAGTCCCA-GACT-GAG  46

seq1  TAGTAGCTGAGAGTTTACATCTGATTCACAAATTATAGGCAGAGTGAGAC  100
      |||||||||  ||||| ||||||| |||||||||||| ||||| |||| |
seq2  TAGTAGCTGGAAGTTT-CATCTGA-TCACAAATTATA-GCAGA-TGAG-C  91

seq1  AGAAACTGGGCTTGGTGTGGAGTTTTGAAACATCAAAGCCCAACCCCAGT  150
       ||||||||||||||||| ||||||   ||||||||||||||||||||||
seq2  CGAAACTGGGCTTGGTGT-GAGTTT--GAACATCAAAGCCCAACCCCAGT  138

seq1  GATATACTTTCTTCCTCCCAC-AAAGTCTCATTTTATAATTTATTCTAAA  199
      ||||||||||||||  | ||| ||||||||||||||||||||| ||||||
seq2  GATATACTTTCTTCTCCGCACAAAAGTCTCATTTTATAATTTA-TCTAAA  187

seq1  CACTCTACTAACTAGGTAA-CCAGGCATTCAAAACGGAGT-CTATAGGGG  247
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  CACTCTACTAACTAGGTAACCCAGGCATTCAAAACGGAGTCCTATAGGGG  237

seq1  CCATTCTCATTG-AAACCACGACAGAACCTATACAAAGAAAACCATTAAG  296
      |||||||||||| ||||||||||||||||||||||||  |||||||||||
seq2  CCATTCTCATTGAAAACCACGACAGAACCTATACAAAAGAAACCATTAAG  287

seq1  AAATACCAGCACCTTAATAAATGATTTGATGTTTGTGCTGTTTATTTACT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAGCACCTTAATAAATGATTTGATGTTTGTGCTGTTTATTTACT  337

seq1  AGGCAGACATAGGAACATGCTCATTTTCCTTGTATTTAATCACAATATAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACATAGGAACATGCTCATTTTCCTTGTATTTAATCACAATATAA  387

seq1  AGGGCGTTTTACATTTAATTTCACCTTTTATAGAGTTTCTCAGCCAGCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGTTTTACATTTAATTTCACCTTTTATAGAGTTTCTCAGCCAGCAG  437

seq1  CATAGTCCTCATTCCAATTCATTACCCAAGCATTTTGGCAGGATTGAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCCTCATTCCAATTCATTACCCAAGCATTTTGGCAGGATTGAAAG  487

seq1  ATATTTTGTTGTTCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATATGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGTTGTTCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATATGCA  537

seq1  GTGCATGGAGACCAGTGATGTTGCTGAATATCCCATAAGGCATATAGCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGAGACCAGTGATGTTGCTGAATATCCCATAAGGCATATAGCAG  587

seq1  CCCCAAGCCCAACCTGAATATCTTGACCCAAGATGTTAGTAGGATTGGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGCCCAACCTGAATATCTTGACCCAAGATGTTAGTAGGATTGGAG  637

seq1  TTGGGAAATTCTGTTCTGAACAAGATACCATAAATGTTTTCCATTTTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAATTCTGTTCTGAACAAGATACCATAAATGTTTTCCATTTTGTT  687

seq1  GTCCCATGCATTTTAGTATTCTTCATTTTGTAATTTTTTAACAGTTATGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGCATTTTAGTATTCTTCATTTTGTAATTTTTTAACAGTTATGA  737

seq1  AACTCATGTACTATAATTTACTTAACTTGACACATGTGATGTATTATTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGTACTATAATTTACTTAACTTGACACATGTGATGTATTATTAA  787

seq1  GATTGTTTCCAACTTTTCACTACTATAAATAATGGTAGAAATACTATTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTCCAACTTTTCACTACTATAAATAATGGTAGAAATACTATTTC  837

seq1  CCCAGCTTTACAGATGACCTTTAAAAAATTGATAGTAGGACTTAAATGTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTTTACAGATGACCTTTAAAAAATTGATAGTAGGACTTAAATGTC  887

seq1  ATAATTAAGCCAAATATCAATTGTTTTACTAGTTAGTAAAAAAATAATCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAGCCAAATATCAATTGTTTTACTAGTTAGTAAAAAAATAATCA  937

seq1  CTGTAACACTCATTTACTAACATGTATGCTTTTCTTTTTAGGAAAGCATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACACTCATTTACTAACATGTATGCTTTTCTTTTTAGGAAAGCATC  987

seq1  TTTCTTTTTCCATGTTTAATTGCTCACTTACAACATGTTAGAGGCCACAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCCATGTTTAATTGCTCACTTACAACATGTTAGAGGCCACAT  1037

seq1  TAGTATGCAGTGCGTGAATTC  1067
      |||||||||||||||||||||
seq2  TAGTATGCAGTGCGTGAATTC  1058

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information