BAC Information

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BAC

Clone NameB6Ng01-106A09
Chromosome6 (Build37)
Map Location 74,680,322 - 74,681,224
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106A09.bB6Ng01-106A09.g
ACCDH913880DH913881
length1,247902
definitionDH913880|Mus musculus domesticus DNA, BAC clone: B6Ng01-106A09, 5' end.DH913881|Mus musculus domesticus DNA, BAC clone: B6Ng01-106A09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatcattcttaaatatgttgacataattagatgtatatcctc
cctatcttttgttttgtccctgttttgtatctgattcttttaatttggat
atttttgcagagttttacttagtttgtaaagatttttctatcttgctgat
ttctcaaaggaccaattctttgttttatgaattttttgtgttattctgtt
actatattttttaattcagccctcagtttgattatgccttgccatctaca
cttacttcttggagttctgcagcttccaggtgtgctgtgaagttgataga
tagatatctctttaactttttttaaggtagtcatttagtgcttagaactt
tccttttagcacctcttttttgtgtgtgttccatagatacagttatgctg
tgtgttaattttcaccgcattctagaaaatgtttccattcgctttaaatt
tctgtcttgatacattttaatgcaatagaaagttattaaatttccataag
cttgtaagctttcaggtgtttctgttgttgatatccagctttaatctgtg
gaaatctgaaaggattcaggaagaaatatcaaatatcctgtgtctgtgaa
gactttcattgtgtccttggatgtggtcgatgttggagaaagttctatga
gttgctgagcagaaggtatactcctttctgtttgagtgaaatattctata
aataacatgctatattcatttgatttaaaatatctgttagctctagtacc
aatctgttcaatgtttgtctggatgaactttccattggtgagagtagagg
actgaactttcccactatcacagtgaaagtgtcagtatgtgatttaagat
atggccatatttcttttctaaaactgggtgaccctctgtttggggcatat
atgctaataattgaaatgtcaacaagtatatttttcctttgattagtagg
taatgtccatccctacccatttatttagtttgtttgaaatctatttaaac
agacgttaaatgctacaccagcaattttcctctttagttcatttattgaa
tatattgtcaatttaccctgataatattaatgtgatgtatgtttcaagga
acataggtttttacaaatattgacaacagcagaaattacttttagtttta
taaaggtaatggatcaattgtttggaatcctggtacgtttataaccggtt
cggcaattgaacagattctctaccgtacagagacaacggcgagtaac
gaattcactcagaataatattttctagttccatccattttcctgcaaaac
tcatgatgtccactttcttaatagccaaatagtattccattgtgtaaatc
agttacattttctgtatccattcttctgttgtgggatatctgtgttattt
atagcttctgactatcacatattaggctgctatgagtatagtggagcccg
taagcacgtggtttggtgtggcatcttttgtgtatatgcccaagaatggc
tgggtcttcagttgagtaggagggggggtaatgactagactgtaaaaaaa
taaatataataaaaataaagattaataatcttgagcattcaaagatcaca
tatctattactggatatctcacacttgtcatgtcatattacaaaagtcac
taacatacctgtccattttggaatgtgtttaaacctctcaatcaataatt
gacttatttattcatagtattttaacttttccttctaaagtactaaaaac
ttgatgcaataaattaaactatatcatcataatgaattttagtggtttat
tataatactttattacaaattaagaaaccataaatcaaatcaaaacaatg
tatgtcaaactgtcaacatcaatttcaatgtagtatacattgcaaccagg
gacaaaataaattcctttgttctgataaaatgcacatatagtcaactacc
aaattgaattgttgttgttgttgtttttaatattttacttgagaaagtag
cattgggttaaagttgcttgggtttgaaatcctgagggatattcaatgga
ctttattccatgtttctgccattttttaatgccctttggtttttaagagt
taattccctaaatgaaaattccttataggacaggttatgattaaatttta
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74680322_74681224
seq2: B6Ng01-106A09.g_69_970

seq1  GAATTCACTCAGAATAATATTTTCTAGTTCCATCCATTTTCCTGCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGAATAATATTTTCTAGTTCCATCCATTTTCCTGCAAAAC  50

seq1  TCATGATGTCCACTTTCTTAATAGCCAAATAGTATTCCATTGTGTAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGTCCACTTTCTTAATAGCCAAATAGTATTCCATTGTGTAAATC  100

seq1  AGTTACATTTTCTGTATCCATTCTTCTGTTGTGGGATATCTGTGTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACATTTTCTGTATCCATTCTTCTGTTGTGGGATATCTGTGTTATTT  150

seq1  ATAGCTTCTGACTATCACATATTAGGCTGCTATGAGTATAGTGGAGCCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTCTGACTATCACATATTAGGCTGCTATGAGTATAGTGGAGCCCG  200

seq1  TAAGCACGTGGTTTGGTGTGGCATCTTTTGTGTATATGCCCAAGAATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACGTGGTTTGGTGTGGCATCTTTTGTGTATATGCCCAAGAATGGC  250

seq1  TGGGTCTTCAGTTGAGTAGGAGGGGGGGTAATGACTAGACTGTAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTCAGTTGAGTAGGAGGGGGGGTAATGACTAGACTGTAAAAAAA  300

seq1  TAAATATAATAAAAATAAAGATTAATAATCTTGAGCATTCAAAGATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAATAAAAATAAAGATTAATAATCTTGAGCATTCAAAGATCACA  350

seq1  TATCTATTACTGGATATCTCACACTTGTCATGTCATATTACAAAAGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTACTGGATATCTCACACTTGTCATGTCATATTACAAAAGTCAC  400

seq1  TAACATACCTGTCCATTTTGGAATGTGTTTAAACCTCTCAATCAATAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATACCTGTCCATTTTGGAATGTGTTTAAACCTCTCAATCAATAATT  450

seq1  GACTTATTTATTCATAGTATTTTAACTTTTCCTTCTAAAGTACTAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATTTATTCATAGTATTTTAACTTTTCCTTCTAAAGTACTAAAAAC  500

seq1  TTGATGCAATAAATTAAACTATATCATCATAATGAATTTTAGTGGTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCAATAAATTAAACTATATCATCATAATGAATTTTAGTGGTTTAT  550

seq1  TATAATACTTTATTACAAATTAAGAAACCATAAATCAAATCAAAACAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACTTTATTACAAATTAAGAAACCATAAATCAAATCAAAACAATG  600

seq1  TATGTCAAACTGTCAACATCAATTTCAATGTAGTATACATTGCAACCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAACTGTCAACATCAATTTCAATGTAGTATACATTGCAACCAGG  650

seq1  GACAAAATAAATTCCTTTGTTCTGATAAAATGCACATATAGTCAACTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATAAATTCCTTTGTTCTGATAAAATGCACATATAGTCAACTACC  700

seq1  AAATTGAATTGTTGTTGTTGTTGTTTTTAATATTTTACTTGAGAAAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAATTGTTGTTGTTGTTGTTTTTAATATTTTACTTGAGAAAGTAG  750

seq1  CATTGGGTTAAAGTTGCTTGGGTTTGAAATCCTGAGGGAAATTCAAATGG  800
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  CATTGGGTTAAAGTTGCTTGGGTTTGAAATCCTGAGGGATATTC-AATGG  799

seq1  ACTTTATTCCATGTTTCTGCCATTTTTTAATGCCC-TTGGTTTTTAAGAG  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTTTATTCCATGTTTCTGCCATTTTTTAATGCCCTTTGGTTTTTAAGAG  849

seq1  TTTATTTCCCTAAATGAAATTTCCTTATAGGACAGTTTATGATTAAATTT  899
       ||| |||||||||||||| ||||||||||||||| ||||||||||||||
seq2  -TTAATTCCCTAAATGAAAATTCCTTATAGGACAGGTTATGATTAAATTT  898

seq1  AATT  903
       |||
seq2  TATT  902