BAC Information

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BAC

Clone NameB6Ng01-106I11
Chromosome6 (Build37)
Map Location 128,466,448 - 128,626,463
singlet/doubletdoublet
Overlap genePzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863
Upstream geneEfcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598
Downstream geneLOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I11.bB6Ng01-106I11.g
ACCDH914242DH914243
length1,0291,040
definitionDH914242|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I11, 5' end.DH914243|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,466,448 - 128,467,482)(128,625,420 - 128,626,463)
sequence
gaattctccatcctgagaatgagtgtgcttgcctgcttttctcagcccat
cactcatctttccacgcatcacgctccctccacaaagcacatcaggtgca
agcttaagaatcgctcttctgcctctgcattagaattaattacttccctt
tacaaccactctcttcttacatcttatatttcttacggaaaatttatcac
agttacacacatacacacaaacacacccacacaccttctgttgttaaata
ttttatttcttgacgttggcaacctgccactttcacaagatgcagacacc
ataaagtattcaaaatggaatggaagtttgataagtttctgcttgattga
catttatttaaaaaaaacaaacaagccaatacaaacctgttccttcctct
ttgattttggcttccacctctatcttcatgtcgtggcctttttgtctgag
ctggaatactttggtttttacaacttgtctgaaacatcctttatcatctg
cctgaagagaaggggagagttcccgagttctttgatttgccatgaaaatg
ttggttataagtttacaaaaaggttttaaacgttcaggtacctttgtttg
ttttattcttcctggctccaaggctgaccctgttactttgttaatctctg
gattattcacagccaaccctcgccttccctctcttcggaaaatggatact
atgtgcattatgtcagttatcctagagtttccaagggtgccatcatatat
tgtaattacagatctttgcaggtgttactcctcaagtgataacattccct
ccattctatccactcaacttgggcataagaggcttctataatcacctcga
actaaatgttgactattggcctttgtgctctcttctatatgagatattta
aacatattggtgtacattccttgtataggtactgggattcagtacttcaa
tgcatgaaagtatatggttactttagacatttcttcctctctcttctcat
tctgctcatacccctagtactgtgttcac
gaattccatacgtgtgtatgccatttgaattttactctttactagattct
tttcagatcaggaaaaattgtccaagctgccccctgggctcccactttgt
ccttagctctttcacagtgtccaacggtgtctgggatgctcgagacggag
aacctgttatctctggcatccatgaggctcagagacctcggaatgccact
tgtccacacaccccaactcccgcgggctggggttctctggcttcccacag
ccagacacccacccggggccacgttgaaagtttgcagcagtactcctgag
tatggccgcccagagcaccagtactctggcgggactcaggttgtctccta
ctcaggttgtccggtgcccaacactcctctaaactaattttcatcttggc
tgtcaatgtgattattgctggattttgataatggttttggtttttgataa
tggttttggttgatcaggagcagagcaccaactgtagataacaggtcata
gagcatctgattgattctcacacatgccttggtacacttcctactctgga
tttacaactactgacaaacttgctacaaatccacttcctatgtgtgtagc
tcctgccactgctgatcccattatcactcaggaagccacattctcctcct
cctctcgtgagaaccctaaatcaaaataaataaataaataaataaataaa
taaacaatcaatagttactgcacacgtcaacagtgcatttaaacaccagt
gctagttgcactgagaatgttttacatcttcagggctcaatttgaaccac
accttcattattcttcagtgttgaactatgtaatgtgtacaagaaattga
ctggtgtttgctgccattttcaaacaaactgctggccacatctgacctca
ctgatggtagattttcagttcgactttgaagtattgatataagttataca
agtgaagaaaaaacacaattcttagtgattgctgaaacgcctttatgatg
tctgtgatgggtctggtgtatcactccaggtgaatgactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128466448_128467482
seq2: B6Ng01-106I11.b_43_1071

seq1  GAATTCTCCATCCTGAGAATGAGTGTGCTTGCCTGCTTTTCTCAGCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCCTGAGAATGAGTGTGCTTGCCTGCTTTTCTCAGCCCAT  50

seq1  CACTCATCTTTCCACGCATCACGCTCCCTCCACAAAGCACATCAGGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCTTTCCACGCATCACGCTCCCTCCACAAAGCACATCAGGTGCA  100

seq1  AGCTTAAGAATCGCTCTTCTGCCTCTGCATTAGAATTAATTACTTCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGAATCGCTCTTCTGCCTCTGCATTAGAATTAATTACTTCCCTT  150

seq1  TACAACCACTCTCTTCTTACATCTTATATTTCTTACGGAAAATTTATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCACTCTCTTCTTACATCTTATATTTCTTACGGAAAATTTATCAC  200

seq1  AGTTACACACATACACACAAACACACCCACACACCTTCTGTTGTTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACACACATACACACAAACACACCCACACACCTTCTGTTGTTAAATA  250

seq1  TTTTATTTCTTGACGTTGGCAACCTGCCACTTTCACAAGATGCAGACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCTTGACGTTGGCAACCTGCCACTTTCACAAGATGCAGACACC  300

seq1  ATAAAGTATTCAAAATGGAATGGAAGTTTGATAAGTTTCTGCTTGATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATTCAAAATGGAATGGAAGTTTGATAAGTTTCTGCTTGATTGA  350

seq1  CATTTATTTAAAAAAAACAAACAAGCCAATACAAACCTGTTCCTTCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTAAAAAAAACAAACAAGCCAATACAAACCTGTTCCTTCCTCT  400

seq1  TTGATTTTGGCTTCCACCTCTATCTTCATGTCGTGGCCTTTTTGTCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGGCTTCCACCTCTATCTTCATGTCGTGGCCTTTTTGTCTGAG  450

seq1  CTGGAATACTTTGGTTTTTACAACTTGTCTGAAACATCCTTTATCATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATACTTTGGTTTTTACAACTTGTCTGAAACATCCTTTATCATCTG  500

seq1  CCTGAAGAGAAGGGGAGAGTTCCCGAGTTCTTTGATTTGCCATGAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAGAAGGGGAGAGTTCCCGAGTTCTTTGATTTGCCATGAAAATG  550

seq1  TTGGTTATAAGTTTACAAAAAGGTTTTAAACGTTCAGGTACCTTTGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATAAGTTTACAAAAAGGTTTTAAACGTTCAGGTACCTTTGTTTG  600

seq1  TTTTATTCTTCCTGGCTCCAAGGCTGACCCTGTTACTTTGTTAATCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCTTCCTGGCTCCAAGGCTGACCCTGTTACTTTGTTAATCTCTG  650

seq1  GATTATTCACAGCCAACCCTCGCCTTCCCTCTCTTCGGAAAATGGATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTCACAGCCAACCCTCGCCTTCCCTCTCTTCGGAAAATGGATACT  700

seq1  ATGTGCATTATGTCAGTTATCCTAGAGTTTCCAAGGGTGCCATCATATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATTATGTCAGTTATCCTAGAGTTTCCAAGGGTGCCATCATATAT  750

seq1  TGTAATTACAGATCTTTGCAGGTGTTACTCCTCAGGTGATAACATTCCCT  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTAATTACAGATCTTTGCAGGTGTTACTCCTCAAGTGATAACATTCCCT  800

seq1  CCATTCTATCCACTCAACTTGGGCATAAGAGGCTTCTATAATCACCTCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTATCCACTCAACTTGGGCATAAGAGGCTTCTATAATCACCTCGA  850

seq1  ACTAAATGTTGACTATTGGCC-TTGTGCTCTCTTCTATATGAGATATTTA  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTAAATGTTGACTATTGGCCTTTGTGCTCTCTTCTATATGAGATATTTA  900

seq1  AACATATTGGTGTACATTCCTTGTATATGGTACTGGGATTCAGTACTTCA  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACATATTGGTGTACATTCCTTGTATA-GGTACTGGGATTCAGTACTTCA  949

seq1  ATGCATGAAAGTATATGGTTTACTTTAACACATTTCTTCCCTCTCTTCTT  999
      |||||||||||||||||| ||||||| | ||||||||| |||||| ||||
seq2  ATGCATGAAAGTATATGG-TTACTTT-AGACATTTCTT-CCTCTC-TCTT  995

seq1  CTCATTCTGCTCCTTACCCCTAGTTCCTGTGTTCAC  1035
      ||||||||||| | ||||||||| | ||||||||||
seq2  CTCATTCTGCT-CATACCCCTAG-TACTGTGTTCAC  1029

seq1: chr6_128625420_128626463
seq2: B6Ng01-106I11.g_66_1105 (reverse)

seq1  GAGTCATTTCACTGGAGTGATAAAACACAGACCCATTCACAGCCATCATA  50
      ||||||||   ||||||||||| |   |||||||| |||||| |||||| 
seq2  GAGTCATTCACCTGGAGTGATACA--CCAGACCCA-TCACAGACATCAT-  46

seq1  AAAGGCCTTTCAGACATTTACTAAGAATTG-GGTTTTTCCTCACTTGTAT  99
      |||||| |||||| || | ||||||||||| | |||||| ||||||||||
seq2  AAAGGCGTTTCAG-CAATCACTAAGAATTGTGTTTTTTCTTCACTTGTAT  95

seq1  AACTTATATAAAATACTTCAAAGTAGAACTGAAAATCT-CCATCAGTGAG  148
      |||||||||  ||||||||||||| ||||||||||||| |||||||||||
seq2  AACTTATAT-CAATACTTCAAAGTCGAACTGAAAATCTACCATCAGTGAG  144

seq1  GTCAGATGTGG-CAGCAGTTTGTTTGAAAATGGCAGCAAACACCAGTCAA  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGTGGCCAGCAGTTTGTTTGAAAATGGCAGCAAACACCAGTCAA  194

seq1  TTTCCTTGTACACATTACATAGTTCAACACTGAAGAATAATGAAGGTGTG  247
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTT-CTTGTACACATTACATAGTTCAACACTGAAGAATAATGAAGGTGTG  243

seq1  GTTCAAATTGAGCCCTGAAGATGTAAAACATTCTCAGTGCAACTAGCACT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATTGAGCCCTGAAGATGTAAAACATTCTCAGTGCAACTAGCACT  293

seq1  GGTGTTTAAATGCACTGTTGACGTGTGCAGTAACTATTGATTGTTTATTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTAAATGCACTGTTGACGTGTGCAGTAACTATTGATTGTTTATTT  343

seq1  ATTTATTTATTTATTTATTTATTTTGATTTAGGGTTCTCACGAGAGGAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTATTTTGATTTAGGGTTCTCACGAGAGGAGG  393

seq1  AGGAGAATGTGGCTTCCTGAGTGATAATGGGATCAGCAGTGGCAGGAGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGTGGCTTCCTGAGTGATAATGGGATCAGCAGTGGCAGGAGCT  443

seq1  ACACACATAGGAAGTGGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATAGGAAGTGGATTTGTAGCAAGTTTGTCAGTAGTTGTAAATCC  493

seq1  AGAGTAGGAAGTGTACCAAGGCATGTGTGAGAATCAATCAGATGCTCTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGGAAGTGTACCAAGGCATGTGTGAGAATCAATCAGATGCTCTAT  543

seq1  GACCTGTTATCTACAGTTGGTGCTCTGCTCCTGATCAACCAAAACCATTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTATCTACAGTTGGTGCTCTGCTCCTGATCAACCAAAACCATTA  593

seq1  TCAAAAACCAAAACCATTATCAAAATCCAGCAATAATCACATTGACAGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACCAAAACCATTATCAAAATCCAGCAATAATCACATTGACAGCC  643

seq1  AAGATGAAAATTAGTTTAGAGGAGTGTTGGGCACCGGACAACCTGAGTAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAAATTAGTTTAGAGGAGTGTTGGGCACCGGACAACCTGAGTAG  693

seq1  GAGACAACCTGAGTCCCGCCAGAGTACTGGTGCTCTGGGCGGCCATACTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACCTGAGTCCCGCCAGAGTACTGGTGCTCTGGGCGGCCATACTC  743

seq1  AGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACTGCTGCAAACTTTCAACGTGGCCCCGGGTGGGTGTCTGGCTG  793

seq1  TGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCCAGAGAACCCCAGCCCGCGGGAGTTGGGGTGTGTGGACAAGT  843

seq1  GGCATTCCGAGGTCTCTGAGCCTCATGGATGCCAGAGATAACAGGTTCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCCGAGGTCTCTGAGCCTCATGGATGCCAGAGATAACAGGTTCTC  893

seq1  CGTCTCGAGCATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCGAGCATCCCAGACACCGTTGGACACTGTGAAAGAGCTAAGGACA  943

seq1  AAGTGGGAGCCCAGGGGGCAGCTTGGACAATTTTTCCTGATCTGAAAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGCCCAGGGGGCAGCTTGGACAATTTTTCCTGATCTGAAAAGA  993

seq1  ATCTAGTAAAGAGTAAAATTCAAATGGCATACACACGTATGGAATTC  1044
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTAAAGAGTAAAATTCAAATGGCATACACACGTATGGAATTC  1040