BAC Information

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BAC

Clone NameB6Ng01-106K22
Chromosome6 (Build37)
Map Location 79,952,129 - 79,953,174
singlet/doubletsinglet
Overlap geneLOC100043392
Upstream geneLOC384440, LOC621815
Downstream geneLrrtm4, LOC100043390
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106K22.bB6Ng01-106K22.g
ACCDH914349DH914350
length1,1311,032
definitionDH914349|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K22, 5' end.DH914350|Mus musculus domesticus DNA, BAC clone: B6Ng01-106K22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaatgaggaatattgaatggtcaagaaaaaatgttctaaaga
aatgttcaacatctttagtcatcaggaaaatgcaaatcaaagcaatgtga
gattctacctcacaccagtcagaatgactaagataaaacaactcaggtga
tagcagatgatggcaaggatgtggagaacgaggaacacccctccattgtt
ggtggggttacaagctggttcaaccatcaatctggtggttcctcagaaaa
ttggacatagtactacctgaggacccagctataccactcctgagcatata
tccaaaagatgctccaacatataacaagtatacatgttcatagcagcctt
atttataatagccagaagctggaaagaacacagatgtccttcatcagaga
aatggatacagaatttacataatggagtgctactcagctattaaaaacaa
tgacttcacaaacttcttagacaaatgaatggaactagaaaatatcatcc
ttagtgagtaagccagtcacaaaagtccacacatgatacgtacgcactga
taattggacattagtccaaaatctcagaatatccaagatataattcacag
agctcaaaaagaaggaagactcaattgtggatgcttcagtccttcttaga
agggagaacaaactactcatggtacaaaatacggagacaaagtgtggagt
agagactgaaagaaaggccatctagagactgccctacctcgggacccatc
ccatatacagtcgacaaacccagacactattgcgaatgtcaagaagtact
tgatgacaggggcctgatatagctgtctcctgagaggctctgcagagttt
gacaatacagagatagatgctctcacatccaacctttggactgagcagtg
tccccaatggagaagtcagagaaaggactgagtagctgaaagggtttgca
gcccatagaaagaacatatcaactaaccagacccgcagagttcctaggga
cttaaacacaaacaaagtacatgtggagggactcatgctgtgatagcata
gttaccaaggatgcactcagctccaagaagctgtccctgggtcttggaag
gcttggttttccagtgtagagaatgctagta
gaattcctcagtatttgtaagtggctgactttgtagtttctaggtagttc
tagatatcatcagatcattctagactcttctgctgttggcctcagctagt
gatagtgcccctgatcccagaatgtctgctgtggtttcattttgaaatga
ctcccataggcctttgtgttagaaaactttatctgtagttggtgatattc
tttgggaaggaagtagaaacttgctgtaagaagttcttaaagtctcatac
tgtgaccctcacttcctattctttctcttggttttgatgtaatgaaacca
gagggccttccattccatctctttgccttttctaccatgaagaatgcata
ctctccaactaaaccaaaagaaaccctttctcccttaattacattcttgt
caggttgtttatggcaacaagaaaagtagtgaaggcagtaacttagacct
ttgtgtctaaaggtttaagtttaaaaatctattaaacctttccagtgact
tgagcatgggatttctattatctggctcttcacagttttctatctttcac
ttgatgtgctggctggccttagttcaacttgacacaaaagtagagtcatt
tgggaagagagaaacttagtttaaaatgcttctctcagattggcctgtga
acaaacttgtgttgtattttttctactgttttatgtatggggacctagat
agactctaggccctaaaacacttggaaccatgtcatctctgacaaagtag
tcttggagtgtataggaaagtagggacaacaagtcaagggaaataagcca
gtaagcaccactcctcctgctgtaagatgaaataaactctttgttcccca
aatttctttcttttgtttgtttgtttgttttaattaggtattatttacat
ttcaatgctatcccaaagtccccacccactcacccacccacccactccac
ttcttggccctgtgtccctgtactgagcaataagtttgcaggaccatggc
ctcctcttccactaatggccaattagccatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79952129_79953174
seq2: B6Ng01-106K22.g_67_1098 (reverse)

seq1  AGATGGCCTAATTGGCCATTAGTGGAAAGAGAGGCCCATTGGTCCTGCAA  50
      |||||| ||||||||||||||||||||   ||||||   |||||||||||
seq2  AGATGG-CTAATTGGCCATTAGTGGAAGAGGAGGCC--ATGGTCCTGCAA  47

seq1  ACTTTATTTGCCTCAGTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTG  100
      || |||||   ||||||||||||  ||| |||||||||||||| ||||||
seq2  AC-TTATT--GCTCAGTACAGGG--ACA-CAGGGCCAAGAAGT-GGAGTG  90

seq1  GGTGGGTGGGTGAGTGGGTGGGGGACTTTTGGGATAGCATTTGAAATGTA  150
      ||||||||||||||||||| |||||| |||||||||||| ||||||||||
seq2  GGTGGGTGGGTGAGTGGGT-GGGGAC-TTTGGGATAGCA-TTGAAATGTA  137

seq1  AATAAATACCTAATTAAAACAAACAAACAAACAAAAGAAAGAAATTTGGG  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT-AATACCTAATTAAAACAAACAAACAAACAAAAGAAAGAAATTTGGG  186

seq1  GAACAAAGAGTTTATTTCATCTTACAGCAGGAGGAGTGGTGCTTACTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGAGTTTATTTCATCTTACAGCAGGAGGAGTGGTGCTTACTGGC  236

seq1  TTATTTCCCTTGACTTGTTGTCCCTACTTTCCTATACACTCCAAGACTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCCTTGACTTGTTGTCCCTACTTTCCTATACACTCCAAGACTAC  286

seq1  TTTGTCAGAGATGACATGGTTCCAAGTGTTTTAGGGCCTAGAGTCTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAGAGATGACATGGTTCCAAGTGTTTTAGGGCCTAGAGTCTATCT  336

seq1  AGGTCCCCATACATAAAACAGTAGAAAAAATACAACACAAGTTTGTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCATACATAAAACAGTAGAAAAAATACAACACAAGTTTGTTCAC  386

seq1  AGGCCAATCTGAGAGAAGCATTTTAAACTAAGTTTCTCTCTTCCCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAATCTGAGAGAAGCATTTTAAACTAAGTTTCTCTCTTCCCAAATG  436

seq1  ACTCTACTTTTGTGTCAAGTTGAACTAAGGCCAGCCAGCACATCAAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACTTTTGTGTCAAGTTGAACTAAGGCCAGCCAGCACATCAAGTGA  486

seq1  AAGATAGAAAACTGTGAAGAGCCAGATAATAGAAATCCCATGCTCAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAAAACTGTGAAGAGCCAGATAATAGAAATCCCATGCTCAAGTC  536

seq1  ACTGGAAAGGTTTAATAGATTTTTAAACTTAAACCTTTAGACACAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGGTTTAATAGATTTTTAAACTTAAACCTTTAGACACAAAGGT  586

seq1  CTAAGTTACTGCCTTCACTACTTTTCTTGTTGCCATAAACAACCTGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTTACTGCCTTCACTACTTTTCTTGTTGCCATAAACAACCTGACAA  636

seq1  GAATGTAATTAAGGGAGAAAGGGTTTCTTTTGGTTTAGTTGGAGAGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAATTAAGGGAGAAAGGGTTTCTTTTGGTTTAGTTGGAGAGTATG  686

seq1  CATTCTTCATGGTAGAAAAGGCAAAGAGATGGAATGGAAGGCCCTCTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCATGGTAGAAAAGGCAAAGAGATGGAATGGAAGGCCCTCTGGT  736

seq1  TTCATTACATCAAAACCAAGAGAAAGAATAGGAAGTGAGGGTCACAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACATCAAAACCAAGAGAAAGAATAGGAAGTGAGGGTCACAGTAT  786

seq1  GAGACTTTAAGAACTTCTTACAGCAAGTTTCTACTTCCTTCCCAAAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTAAGAACTTCTTACAGCAAGTTTCTACTTCCTTCCCAAAGAAT  836

seq1  ATCACCAACTACAGATAAAGTTTTCTAACACAAAGGCCTATGGGAGTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAACTACAGATAAAGTTTTCTAACACAAAGGCCTATGGGAGTCAT  886

seq1  TTCAAAATGAAACCACAGCAGACATTCTGGGATCAGGGGCACTATCACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATGAAACCACAGCAGACATTCTGGGATCAGGGGCACTATCACTA  936

seq1  GCTGAGGCCAACAGCAGAAGAGTCTAGAATGATCTGATGATATCTAGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCCAACAGCAGAAGAGTCTAGAATGATCTGATGATATCTAGAAC  986

seq1  TACCTAGAAACTACAAAGTCAGCCACTTACAAATACTGAGGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGAAACTACAAAGTCAGCCACTTACAAATACTGAGGAATTC  1032