BAC Information

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BAC

Clone NameB6Ng01-106M21
Chromosome6 (Build37)
Map Location 129,290,684 - 129,464,843
singlet/doubletdoublet
Overlap geneClec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik
Upstream geneTulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik
Downstream geneGabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106M21.bB6Ng01-106M21.g
ACCDH914440DH914441
length1,1351,047
definitionDH914440|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M21, 5' end.DH914441|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,290,684 - 129,291,820)(129,463,792 - 129,464,843)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtctttaatgacttttatatttgtctgagaaa
actttctttaatcagagattatgagtccacactcatgaattctactgtaa
aggggatgcttctattctttctatagaaatacttgatcctctccaggaag
aaggaaaggctaacattttcccctcatgagaggatacgtgcctgaataaa
gcagctgggctctgctcacatctcagctcttcatctgccatgacatctgc
atgacattgattgaggacttatccggttgtaactcacttacaggcctata
aatcaatgtgataataagaacacctgcctttaaggcttgtatacaggaaa
ccagcacttacaaagtagttagaaggaaataaaccataaatatttaacac
ttttggtatgtgtgtgcatacattcatgtatgtggagataattgtgcact
ttcatatacacacatacaggggtgtgtgtaaacatgcaactggaattacc
ttgttttacgagacagcatctcttactgtgatctggtgcttggtggtcac
taagctggctgaacaatgaggcccagggatcctttcacctttctttcccc
aattttatgattgcatgtttgacttccatgccttgtttctgatgtgggtg
aaggggatttaactcaggtcctcatgcttacacaacaaacattttgtgta
tgagccattttccttgggtactgggtcctttaaattttgcttgtgacctt
tttatgtttatatttcatacagattttgatagtccttttagcattttttt
taaaatttaaagctagtcattgtacatccttgtgggtgcattgtgatgct
tcagtccagtaccgcaagggtgagctcaagatattaggctactcctgatg
gcaacatgttatttcttttgtgatgtatatttcaaaatctttcctgtcat
tatttgaattatagtttataattagtcttttttta
gaattcacgatgtcatctagccagtatcagatatactcatgccaagtaat
caagacgagcctacttacttaattcccctcacatctgatagagctggttt
cagggaaatgattctatggcagaatgtgtgttttcctttcctgtgaacag
gattgttattgtctgtccttacttgaaaccaaaaattgcttttggatttg
aagtgggcatgctgctgtggaaatcatccaaatagataagccaatgactg
gctgctgaacccagtctgccctaatgagtcactggaaaccacagctaagg
aagccttttgcaggtctccctgactatatgtatttaaattaattgtgctg
tgttgacgagaagactgatttgaaaaaaaaaaaaaaaaaaaaaagcactc
tcagtagggtgattctgagcagttggaatgacacacatgtctatgatggt
aggtggtgtccatttaagttaaaagggaagtcggcactatctgctgacat
tttagcctatgtttgggtgttgtcactttgtctgtctctactcctagctt
gaactctcagatacttactgttcagtgttgacacagttctcctcactcct
ggccccaggaagctgtgggaaggaaataatctcagacatggaaatggtca
cacctgcagttctcagcagcctatcaactacccatcatggctgaaccctg
tcagacctatttgtaaagatgaggacaggatcataggattggtctgtact
ggcctgagacattggtcattcctttgactggtgactacatcttgtgaggc
agaagttcctgaaagagcaggatcttctatgtggctcgggccatggctga
gcatccttccttagggaattatgaatagccctctgtgtcagtttgtcacc
ctagaagtctcctgactcatcccctgggacattgtggtgtctcctatccc
tgcactgctgaaaatgaaatctagccccagtgctattcattttcagcctt
cacccacatcagtatctcactacacaagagagcattgggggagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129290684_129291820
seq2: B6Ng01-106M21.b_47_1181

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGACGGTGTCTTTAATGACTTTTATATTTGTCTGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACGGTGTCTTTAATGACTTTTATATTTGTCTGAGAAA  200

seq1  ACTTTCTTTAATCAGAGATTATGAGTCCACACTCATGAATTCTACTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTAATCAGAGATTATGAGTCCACACTCATGAATTCTACTGTAA  250

seq1  AGGGGATGCTTCTATTCTTTCTATAGAAATACTTGATCCTCTCCAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATGCTTCTATTCTTTCTATAGAAATACTTGATCCTCTCCAGGAAG  300

seq1  AAGGAAAGGCTAACATTTTCCCCTCATGAGAGGATACGTGCCTGAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGCTAACATTTTCCCCTCATGAGAGGATACGTGCCTGAATAAA  350

seq1  GCAGCTGGGCTCTGCTCACATCTCAGCTCTTCATCTGCCATGACATCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGGCTCTGCTCACATCTCAGCTCTTCATCTGCCATGACATCTGC  400

seq1  ATGACATTGATTGAGGACTTATCCGGTTGTAACTCACTTACAGGCCTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTGATTGAGGACTTATCCGGTTGTAACTCACTTACAGGCCTATA  450

seq1  AATCAATGTGATAATAAGAACACCTGCCTTTAAGGCTTGTATACAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGTGATAATAAGAACACCTGCCTTTAAGGCTTGTATACAGGAAA  500

seq1  CCAGCACTTACAAAGTAGTTAGAAGGAAATAAACCATAAATATTTAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTTACAAAGTAGTTAGAAGGAAATAAACCATAAATATTTAACAC  550

seq1  TTTTGGTATGTGTGTGCATACATTCATGTATGTGGAGATAATTGTGCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTATGTGTGTGCATACATTCATGTATGTGGAGATAATTGTGCACT  600

seq1  TTCATATACACACATACAGGGGTGTGTGTAAACATGCAACTGGAATTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATACACACATACAGGGGTGTGTGTAAACATGCAACTGGAATTACC  650

seq1  TTGTTTTACGAGACAGCATCTCTTACTGTGATCTGGTGCTTGGTGGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTACGAGACAGCATCTCTTACTGTGATCTGGTGCTTGGTGGTCAC  700

seq1  TAAGCTGGCTGAACAATGAGGCCCAGGGATCCTTTCACCTTTCTTTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGGCTGAACAATGAGGCCCAGGGATCCTTTCACCTTTCTTTCCCC  750

seq1  AATTTTATGATTGCATGTTTGACTTCCATGCCTTGTTTCTGATGTGGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATGATTGCATGTTTGACTTCCATGCCTTGTTTCTGATGTGGGTG  800

seq1  AAGGGGATTTAACTCAGGTCCTCATGCTTACACAACAAACATTTTGTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGATTTAACTCAGGTCCTCATGCTTACACAACAAACATTTTGTGTA  850

seq1  TGAGCCA-TTTCCTTGGGTACTGGGTCCTTTAAATTTTGCTTGTGACCTT  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATTTTCCTTGGGTACTGGGTCCTTTAAATTTTGCTTGTGACCTT  900

seq1  TTTATGTTTATATTTCATACAGATTTTGATAGTCCTTTTAGCATTTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTATATTTCATACAGATTTTGATAGTCCTTTTAGCATTTTTTT  950

seq1  TAAAATTTAAAGCTAGTCATTGTACATCCTTGTGGGGTGCATTGTGATGC  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAAATTTAAAGCTAGTCATTGTACATCCTTGT-GGGTGCATTGTGATGC  999

seq1  TTCAGTCCAGTACCGCAAGGGTGAGCTCAAGATATTAGGCTACTCCTGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCAGTACCGCAAGGGTGAGCTCAAGATATTAGGCTACTCCTGAT  1049

seq1  GGCAAACATGTTATTTC-TTTGTGATGGTAATATTCAAAATCTTTCCCTG  1098
      ||| ||||||||||||| |||||||| |||   |||||||||||| ||||
seq2  GGC-AACATGTTATTTCTTTTGTGAT-GTATATTTCAAAATCTTT-CCTG  1096

seq1  TAATTATTTTGAATTATAGTTTATAA-TAGTCTTTTTTTA  1137
      | |||| ||||||||||||||||||| |||||||||||||
seq2  TCATTA-TTTGAATTATAGTTTATAATTAGTCTTTTTTTA  1135

seq1: chr6_129463792_129464843
seq2: B6Ng01-106M21.g_67_1113 (reverse)

seq1  ACATCTCCCCCATTGCTCTTCTTGTGTAGTGAGATACTGATGT-GGTGAA  49
      |||||||||||| ||||| |||||||||||||||||||||||| ||||||
seq2  ACATCTCCCCCAATGCTC-TCTTGTGTAGTGAGATACTGATGTGGGTGAA  49

seq1  GGCTGAAAATGAATAGCACTGGGGCTAGATTTCAATTTTCAGCAGTGCAG  99
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGCTGAAAATGAATAGCACTGGGGCTAGATTTC-ATTTTCAGCAGTGCAG  98

seq1  GGATAAGGAAGACAACCACAATGTCCCAGGGGATGAGTCAGGAGACTTCT  149
      |||||  | |||| ||||||||||||||||||||||||||||||||||||
seq2  GGATA--GGAGAC-ACCACAATGTCCCAGGGGATGAGTCAGGAGACTTCT  145

seq1  AGGGTGACAAACTGACACAGAGGGCTATTCATAATTCCCTAAGGAAGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGACAAACTGACACAGAGGGCTATTCATAATTCCCTAAGGAAGGAT  195

seq1  GCTCAGCCATGGCCCGAGCCACATAGAAGATCCCTGCTCTTTCAGGAACT  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTCAGCCATGGCCCGAGCCACATAGAAGAT-CCTGCTCTTTCAGGAACT  244

seq1  TCTGCCTCACAAGATGTAGTCACCAGTCAAAGGAATGACCAATGTCTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCACAAGATGTAGTCACCAGTCAAAGGAATGACCAATGTCTCAG  294

seq1  GCCAGTACAGACCAATCCTATGATCCTGTCCTCATCTTTACAAATAGGTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACAGACCAATCCTATGATCCTGTCCTCATCTTTACAAATAGGTC  344

seq1  TGACAGGGTTCAGCCATGATGGGTAGTTGATAGGCTGCTGAGAACTGCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGGTTCAGCCATGATGGGTAGTTGATAGGCTGCTGAGAACTGCAG  394

seq1  GTGTGACCATTTCCATGTCTGAGATTATTTCCTTCCCACAGCTTCCTGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCATTTCCATGTCTGAGATTATTTCCTTCCCACAGCTTCCTGGG  444

seq1  GCCAGGAGTGAGGAGAACTGTGTCAACACTGAACAGTAAGTATCTGAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAGTGAGGAGAACTGTGTCAACACTGAACAGTAAGTATCTGAGAG  494

seq1  TTCAAGCTAGGAGTAGAGACAGACAAAGTGACAACACCCAAACATAGGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTAGGAGTAGAGACAGACAAAGTGACAACACCCAAACATAGGCT  544

seq1  AAAATGTCAGCAGATAGTGCCGACTTCCCTTTTAACTTAAATGGACACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCAGCAGATAGTGCCGACTTCCCTTTTAACTTAAATGGACACCA  594

seq1  CCTACCATCATAGACATGTGTGTCATTCCAACTGCTCAGAATCACCCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCATCATAGACATGTGTGTCATTCCAACTGCTCAGAATCACCCTAC  644

seq1  TGAGAGTGCTTTTTTTTTTTTTTTTTTTTTTCAAATCAGTCTTCTCGTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGCTTTTTTTTTTTTTTTTTTTTTTCAAATCAGTCTTCTCGTCA  694

seq1  ACACAGCACAATTAATTTAAATACATATAGTCAGGGAGACCTGCAAAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCACAATTAATTTAAATACATATAGTCAGGGAGACCTGCAAAAGG  744

seq1  CTTCCTTAGCTGTGGTTTCCAGTGACTCATTAGGGCAGACTGGGTTCAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTAGCTGTGGTTTCCAGTGACTCATTAGGGCAGACTGGGTTCAGC  794

seq1  AGCCAGTCATTGGCTTATCTATTTGGATGATTTCCACAGCAGCATGCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTCATTGGCTTATCTATTTGGATGATTTCCACAGCAGCATGCCCA  844

seq1  CTTCAAATCCAAAAGCAATTTTTGGTTTCAAGTAAGGACAGACAATAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATCCAAAAGCAATTTTTGGTTTCAAGTAAGGACAGACAATAACA  894

seq1  ATCCTGTTCACAGGAAAGGAAAACACACATTCTGCCATAGAATCATTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTCACAGGAAAGGAAAACACACATTCTGCCATAGAATCATTTCC  944

seq1  CTGAAACCAGCTCTATCAGATGTGAGGGGAATTAAGTAAGTAGGCTCGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACCAGCTCTATCAGATGTGAGGGGAATTAAGTAAGTAGGCTCGTC  994

seq1  TTGATTACTTGGCATGAGTATATCTGATACTGGCTAGATGACATCGTGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTACTTGGCATGAGTATATCTGATACTGGCTAGATGACATCGTGAA  1044

seq1  TTC  1052
      |||
seq2  TTC  1047