BAC Information

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BAC

Clone NameB6Ng01-106O14
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106O14.bB6Ng01-106O14.g
ACCDH914521DH914522
length1,0141,225
definitionDH914521|Mus musculus domesticus DNA, BAC clone: B6Ng01-106O14, 5' end.DH914522|Mus musculus domesticus DNA, BAC clone: B6Ng01-106O14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcaattctgagccccattttttaatggggttatttgatt
ttatggagtctaccttcttgaattctttatatatattggatattagtctc
ctatctgatttaggataggtaaagaacctttcccaatctgttggtgcctt
tttgtcttattgacggtgtcttttgccttgcagaagcgttgcaattttat
gaggtcccatttttcgattctcgatcttacagcacaagccattgctgttc
tattcaggaattttccccctgtacccatatcttcaaggcttttccctact
ttctcctctatacgtttcagtgtctctggttttaaatggagttccttaat
ccacttagatttgaccttatacaaggagatagaaatggatcaattctcat
tcttctacatgataacagccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggattgttttagctcccttgtcaaagatcaagtga
ccataggtatgtgggttcatctctgggtcttcaattctgttccattggtc
tacatggctgtcactataccagtaccatgcagtttttatcacaactgctc
tgtagtacagctttaggttgggcatggtgattttaccagaggttctttta
tccttgagaagagtttttgctatcctaggttttttgttattccagatgaa
agtaccgattgccctttctaattcattgaagaattgagttggaaatttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
actatattgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttcttttagttctttcttcagagacttgaagttcttatcctaca
gatctttcacttccttagttagagtcacaccaaggtattttatattattt
gtgacattgagagagtgttgttccctaatttctttctcagcctgtttatc
ttttgggtacaaaa

gaattccaggtcacaatgagaaaacgaaacctatggataataggagtaga
tgaaaatgaagattttcaaattaaagggccagcaaatatcatcaacaaga
ttatagaagaaaacttcccaaacctaaaaaaagagatgcccatgaacata
caagaagcctacagaactccaaatagactggaacagaagagaaattcctc
ctgacacataataatcagaacaacaaatgcagtaaataaagacagagtat
taaaaacagaaagggaaaagagtcaaacgaaataaaaaggcaaacctatt
agaattacaccagacttctcatcagagactataaaatctacatgatcctc
aacagatgttatacagactcgaagagaatccaaatgcaaacccaggctaa
tatacccatcaaaagtctcaattaccgtatatggagaaaccaaagtattc
catgccaaaaccaaattcacacaatatctttgcaccaatccagcccttca
aagggtaatacagagaaaactgcaatacaaggatggaaattatgccctat
agaaagcaagaaaataatccttcaatgatcctaaaagaagacagccctaa
gaacagaaccccaactcttacaacaaaaataacaagaagcaacaaacttt
tccttaatatctcttaataccaatgtactcaattccccagtaaaaagaca
tagactaaaagattggctataaaaacaggtcccaacattatgctgcatga
gggaaacccatctcagggacaaattcacatactacctgagactaaaaggc
tggaaaacaattttcctaggaaatggtctgaagaaacaagctagtgtaac
cattctaacaacgaataaaatcgacttcgaaaccaaaattatcaaaaaga
cagggaggacactttatattaatcaaagttaaaattcctagatgagtctc
aattgtgaatgtctgtgctcaaacacagggcatcacattcactatggaac
tttagtaaagctcaaagcacacattgcacctcactcataatatgggagac
ttcacacatactctcagcatggtagacctggaaagaaactagtcgagaca
tggaactatcaatttatgagacttgaattaacgaattcttaacattttat
cctgacacgaattacttctttggaccctctatgtaacgtccttctaattg
gtacatcatatatgtgttccaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-106O14.b_47_573 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  CCCAGAGATGAACCCACATACCTATGGTCACTTGATCTTTGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||| ||||||||||| |||||||||||||||||||| |||||||||
seq2  CTAAAACAATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||| ||||||| |||||||||||| |||| |||||||   ||||
seq2  CACAACTGGCTGTTATCATGTAGAAGAATGAGAATTGATCCATTTCTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| |||| ||||||||||||||||||||| |||||||| ||  ||||||
seq2  TCCTTGTA-TAAGGTCAAATCTAAGTGGATTAAGGAACTCCATTTAAAAC  199

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  CAGAGACACTGAAACGTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGAT  249

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||| | ||||| ||| |||||||| |||||||||||||| ||||||||
seq2  ATGGGTACAGGGGGAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGT  299

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | ||||||||| ||||||||||| || ||| | ||| | |||||||
seq2  AAGATCGAGAATCGAAAAATGGGACCTCATAAAATTGCAACGCTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  AGGCAAAAGACACCGTCAATAAGACAAAAAG-GCACCAACAGATTGGGAA  398

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||| |||||||||||||||||||||||||| ||||||||||||| |||||
seq2  AGGTTCTTTACCTATCCTAAATCAGATAGGAGACTAATATCCAATATATA  448

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      ||||||| |||||||||| |||| || ||||||||||||||||||||| |
seq2  TAAAGAATTCAAGAAGGTAGACTCCATAAAATCAAATAACCCCATTAAAA  498

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||| ||||||||||||||
seq2  AATGGGGCTCAGAATTGAACAAAGAATTC  527


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