BAC Information

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BAC

Clone NameB6Ng01-106P10
Chromosome6 (Build37)
Map Location 18,791,040 - 18,792,165
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829
Downstream geneLsm8, Ankrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106P10.bB6Ng01-106P10.g
ACCDH914557DH914558
length1,1151,246
definitionDH914557|Mus musculus domesticus DNA, BAC clone: B6Ng01-106P10, 5' end.DH914558|Mus musculus domesticus DNA, BAC clone: B6Ng01-106P10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttaaagctatatctataattattcaagaaaatagactgcatt
gtaaaaaaaaaaaatgttttgtcaccccaaagcttattctaacattttgt
gtattgtcatattttctaatggggcgagaagagtggcacacattttaagt
gctttaaggaagagtgagtacttgtattgggaagcttttaaaaaagattc
ttaacttaggacttgaggaaaaagtaaattcacttcagggaaatgggctg
gaactgaagctaagctagcatgagtctcagtatgagtccttgattcattg
ccataataggaaggatagaaaacaagtgtgaccaggagacaggataagaa
aggaaatggtatatatgacaatttatgggtactatggtaatagcagttgg
tgaagcagaaggatagaaacagtaagagataggactgttaaagtaaccta
acctgttgaactgtagaaatgtgttaatcaacaatatatatccaatagct
ttaaattgtattattatgtatatgtagtgtgtgtgtgtgcgcgcgcacct
atatgattaggccatggtacaggtctggaagtcataagtcaactttcaga
attcagttctcccttttcacccaaggaccctaggcatcaaactcattatc
agattgcacaggaaacagttttacctggggaaactatgctggagcctgtt
ggcatgaaggcgaacagttcctgagtgcagagtgaggatgattataggaa
aggtagagaaaagacacagagacagagataagatttggggaggactgcca
gtgagtacttgcagcaacctcaagtttattattcgtagccgttttaaccc
cacagtaccgtgggaacagaaccaacaagctaacaaacaactgctgcaat
atacacaggacatatgttctcatccagaggcctccctgttccttctacca
aggtcattagaacattcagccccttgccttgagcctcaagtgtacctcct
cctatcctagcagcctcagcagccaggaaatctgccgcagatctgacatg
cctcacctcactctgcccggcggcagaaactcttctcttctccctctctc
tcactctctcctctc

gaattcaaacaggaactacaacatggttcatgagatagaagagagaaact
caagcattgaagatgtgatagaagaaatagatataccagtcagaaaatgt
ttcatctaaaacaattcctgacacaaaacatctaggaaatataagacact
aggaaaagaccaaatataagtataataggaatagaggaaagagaagaatc
ccagttcaaaggcccagaaaatattttcaacaaaatcatagaagaaaatt
tccctaatctaaagaagatacccatagattcaagaagcatttagaataga
ttggatcagaaaaggaagtctccttgctacataaaaatcaaaactaaacc
tatagaacaaataaagaatattaaagctgcaatgaaaaaaggccaagtag
catataaaagcagacctattaaaattacagcttagttctcaatggaaact
ctaaaagccatataaatctagatatatacattcaagactctaaaatacca
tagatgctcgcccagactaatatacctagcaaaactttcaatcactatag
ggaaaaaaaggtattacatggtaaattcacatttaaattctatatatatg
tatatatatggaaaaatccaacccaaggaggttaattacactcatgaaag
cacaggaaataatctcacgtcagcaaaaccaaaacaagtgaaatacacaa
acataccaccaccactatcaccacaaccccaacaaccaccacgaccacca
tcatcaccaccaaacaacaacaacaacaacaataacaacaacacaacaac
aacaacgaaagtaacagcaatcaacaatcactggttattgatatctctca
atgtcaatgttctcaccttcccaagaagaagacacagactaataggaaaa
gatcccaaaacagatccatcctcctgttgcatccagaaacacacctcaac
attaagacagatattacctcaagtaaaaggttgggaaagatagtccaagc
aatggatctaaaaacatgtgatgtgctattttaattctacaaatagactt
caactaaaactgatcaaagagatgaggaagaaatgagtaccctacatatt
catcaaggaaaaatgacccaggattaatttcatcctaacatctataccat
cgtttgtaagtagacatctaagcttagtcagattgaccgtactgcggata
gatgaggaatcaatactctctacatctttcccacaagagacagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18791040_18792165
seq2: B6Ng01-106P10.b_44_1158 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTCTGCCCGC  50
      ||||| ||||||| ||||||||| |||| ||||| ||||| |||| ||||
seq2  GAGAG-GAGAGAGTGAGAGAGAGGGAGA-AGAGA-AGAGTTTCTG-CCGC  46

seq1  CGGGCAGAGTGGAGGTGAGGCATGTCAGGATCTGCTGGCAGATTTCCTGG  100
      |||||||||| |||||||||||||||| ||||||| ||||||||||||||
seq2  CGGGCAGAGT-GAGGTGAGGCATGTCA-GATCTGC-GGCAGATTTCCTGG  93

seq1  CTTGCTGAGGCCTGCTAGGATAGGAGGAGGTACACTTGAGGCTCAAGGCA  150
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  C-TGCTGAGG-CTGCTAGGATAGGAGGAGGTACACTTGAGGCTCAAGGCA  141

seq1  AGGGGCTGAATGTTCTATTGACCTTGGTAGAAGGAACAGGGAGGCCTCTG  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGGGCTGAATGTTCTAATGACCTTGGTAGAAGGAACAGGGAGGCCTCTG  191

seq1  GATGAGAACATATGTCCTGTGTATATTGCAGCAGTTGTTTGTTAGCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAACATATGTCCTGTGTATATTGCAGCAGTTGTTTGTTAGCTTGT  241

seq1  TGGTTCTGTTTCCCACGGTACTGTGGGGTTTAAAACGGCTACGAATAATA  300
      |||||||| ||||||||||||||||||| |||||||||||||||||||||
seq2  TGGTTCTG-TTCCCACGGTACTGTGGGG-TTAAAACGGCTACGAATAATA  289

seq1  AACTTGAGGTTGCTGCAAGTACTCACTGGCAGTCCTCCCCAAATCTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGGTTGCTGCAAGTACTCACTGGCAGTCCTCCCCAAATCTTATC  339

seq1  TCTGTCTCTGTGTCTTTTCTCTACCTTTCCTATAATCATCCTCACTCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTGTGTCTTTTCTCTACCTTTCCTATAATCATCCTCACTCTGC  389

seq1  ACTCAGGAACTGTTCGCCTTCATGCCAACAGGCTCCAGCATAGTTTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAACTGTTCGCCTTCATGCCAACAGGCTCCAGCATAGTTTCCCC  439

seq1  AGGTAAAACTGTTTCCTGTGCAATCTGATAATGAGTTTGATGCCTAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAACTGTTTCCTGTGCAATCTGATAATGAGTTTGATGCCTAGGGT  489

seq1  CCTTGGGTGAAAAGGGAGAACTGAATTCTGAAAGTTGACTTATGACTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTGAAAAGGGAGAACTGAATTCTGAAAGTTGACTTATGACTTCC  539

seq1  AGACCTGTACCATGGCCTAATCATATAGGTGCGCGCGCACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGTACCATGGCCTAATCATATAGGTGCGCGCGCACACACACACAC  589

seq1  TACATATACATAATAATACAATTTAAAGCTATTGGATATATATTGTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATACATAATAATACAATTTAAAGCTATTGGATATATATTGTTGAT  639

seq1  TAACACATTTCTACAGTTCAACAGGTTAGGTTACTTTAACAGTCCTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATTTCTACAGTTCAACAGGTTAGGTTACTTTAACAGTCCTATCT  689

seq1  CTTACTGTTTCTATCCTTCTGCTTCACCAACTGCTATTACCATAGTACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTTTCTATCCTTCTGCTTCACCAACTGCTATTACCATAGTACCC  739

seq1  ATAAATTGTCATATATACCATTTCCTTTCTTATCCTGTCTCCTGGTCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTGTCATATATACCATTTCCTTTCTTATCCTGTCTCCTGGTCACA  789

seq1  CTTGTTTTCTATCCTTCCTATTATGGCAATGAATCAAGGACTCATACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTCTATCCTTCCTATTATGGCAATGAATCAAGGACTCATACTGA  839

seq1  GACTCATGCTAGCTTAGCTTCAGTTCCAGCCCATTTCCCTGAAGTGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATGCTAGCTTAGCTTCAGTTCCAGCCCATTTCCCTGAAGTGAATT  889

seq1  TACTTTTTCCTCAAGTCCTAAGTTAAGAATCTTTTTTAAAAGCTTCCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTCCTCAAGTCCTAAGTTAAGAATCTTTTTTAAAAGCTTCCCAA  939

seq1  TACAAGTACTCACTCTTCCTTAAAGCACTTAAAATGTGTGCCACTCTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTACTCACTCTTCCTTAAAGCACTTAAAATGTGTGCCACTCTTCT  989

seq1  CGCCCCATTAGAAAATATGACAATACACAAAATGTTAGAATAAGCTTTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCATTAGAAAATATGACAATACACAAAATGTTAGAATAAGCTTTGG  1039

seq1  GGTGACAAAACATTTTTTTTTTTTACAATGCAGTCTATTTTCTTGAATAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAAAACATTTTTTTTTTTTACAATGCAGTCTATTTTCTTGAATAA  1089

seq1  TTATAGATATAGCTTTAAAGGAATTC  1126
      ||||||||||||||||||||||||||
seq2  TTATAGATATAGCTTTAAAGGAATTC  1115


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