BAC Information

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BAC

Clone NameB6Ng01-107E09
Chromosome6 (Build37)
Map Location 79,246,475 - 79,247,301
singlet/doubletsinglet
Overlap genenone
Upstream genePap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107E09.bB6Ng01-107E09.g
ACCDH914783DH914784
length1,147823
definitionDH914783|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E09, 5' end.DH914784|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaagactgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtacaatagaggatccagcaatacctctcctgggca
tatatctagaagatgccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagtcagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatataatttcctaaacacatacaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccttatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgtcggggcctagcaaaca
cagaagtggatgccacagtcagctaatggatggatcacagggctcccaat
ggagagctagagaaagtacccaagagctaaagggatctgcaccctatagt
gatcaacattatgactaaccagtacccggagctctgactctagctgcata
tgtatcaaagatggcctagtggcatcctgaagagagcccattggaccaca
agttatatggcccagaacagggaacgcaggcaaaggggattggccgg
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgtgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggcggcacacatgtgattgctcgcagcacgtacc
ggctctccacaatgctggatttgaagattttgaaacatttggtgcttatg
aaatgatatattagtaaagcaagaaaagaaaataggggatattcatttcc
ttctagaatggttttaaccatttataaacataatattttcagtcaaattt
aagaagtcacttgtcataaagtccatttgtgtatatatatatatatatat
atatatatacacaaatatatatatacaatacatacatacatatatacaca
catatatacatttatacatacatatatatatatatatatatatatatata
tatacatatagtgcttttcatagtaatgatctttataggttatgtgttaa
aatacttggcacataagaaattgcacacagtcttctctccctctactgct
tataactgtgggggcaggttttggtctcttatatgttcatgctacgtcta
ttgtgacacaaagattctttctgctggctgtggatcaaggtgtagaactc
tcagctccttttccagcaccatatctgcctacatgcttccatgcttcgca
ccatgataataatggactaaacctctgaaactgtaaaccagccctaatcc
agtgttttcttctataagaattccatagttgtggtattttttacccgtaa
agaaactctagacaaagctggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79246475_79247301
seq2: B6Ng01-107E09.g_66_888

seq1  GAATTCACTCTTGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTGCACCTGCGTACAAGGCTTGTTTACTAGTTAGGCACAG  50

seq1  CGGAGGCCCGTGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCCCGTGCCATCTTATAATGGCGATTGCTCGCGGCACACACGGCT  100

seq1  CTCCTCAGAGATTACTGGCGGCACACATGTGATTGCTCGCAGCACGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGCGGCACACATGTGATTGCTCGCAGCACGTACC  150

seq1  GGCTCTCCACAATGCTGGATTTGAAGATTTTGAAACATTTGGTGCTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCACAATGCTGGATTTGAAGATTTTGAAACATTTGGTGCTTATG  200

seq1  AAATGATATATTAGTAAAGCAAGAAAAGAAAATAGGGGATATTCATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATATATTAGTAAAGCAAGAAAAGAAAATAGGGGATATTCATTTCC  250

seq1  TTCTAGAATGGTTTTAACCATTTATAAACATAATATTTTCAGTCAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAATGGTTTTAACCATTTATAAACATAATATTTTCAGTCAAATTT  300

seq1  AAGAAGTCACTTGTCATAAAGTCCATTTGTGTATATATATATATATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCACTTGTCATAAAGTCCATTTGTGTATATATATATATATATAT  350

seq1  ATATATATACACAAATATATATATACAATACATACATACATATATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATACACAAATATATATATACAATACATACATACATATATACACA  400

seq1  CATATATACATTTATACATACATATATATATATATATATATATATATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATACATTTATACATACATATATATATATATATATATATATATATA  450

seq1  TATACATATAGTGCTTTTCATAGTAATGATCTTTATAGGTTATGTGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATAGTGCTTTTCATAGTAATGATCTTTATAGGTTATGTGTTAA  500

seq1  AATACTTGGCACATAAGAAATTGCACACAGTCTTCTCTCCCTCTACTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGGCACATAAGAAATTGCACACAGTCTTCTCTCCCTCTACTGCT  550

seq1  TATAACTGTGGGGGCAGGTTTTGGTCTCTTATATGTTCATGCTACGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGTGGGGGCAGGTTTTGGTCTCTTATATGTTCATGCTACGTCTA  600

seq1  TTGTGACACAAAGATTCTTTCTGCTGGCTGTGGATCAAGGTGTAGAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACACAAAGATTCTTTCTGCTGGCTGTGGATCAAGGTGTAGAACTC  650

seq1  TCAGCTCCTTTTCCAGCACCATATCTGCCTACATGCTTCCATGCTTCGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTTTTCCAGCACCATATCTGCCTACATGCTTCCATGCTTCGCA  700

seq1  CCATGATAATAATGGACTAAACCTCTGAAACTGTAAACCAGCCCTAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATAATAATGGACTAAACCTCTGAAACTGTAAACCAGCCCTAATCC  750

seq1  AGTGTTTTCTTCTATAAGAATTTCCATAGTTGTGGTATTTTTTTACCAGT  800
      |||||||||||||||||||| |||||||||||||||| ||||||||| ||
seq2  AGTGTTTTCTTCTATAAGAA-TTCCATAGTTGTGGTA-TTTTTTACCCGT  798

seq1  AAGGAAACTCTAAGACAGAAGCTGGAG  827
      || |||||||| ||||| |||||||||
seq2  AAAGAAACTCT-AGACA-AAGCTGGAG  823