BAC Information

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BAC

Clone NameB6Ng01-107G07
Chromosome6 (Build37)4 (Build37)
Map Location 18,835,676 - 18,836,19770,765,431 - 70,765,948
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107G07.bB6Ng01-107G07.g
ACCDH914873DH914874
length1,010905
definitionDH914873|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G07, 5' end.DH914874|Mus musculus domesticus DNA, BAC clone: B6Ng01-107G07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,676 - 18,836,197)(70,765,431 - 70,765,948)
sequence
gaattccagagtggttgtacaagcttgcaataccaccaacaatgggggag
tgttcctctttctccacatccttgccagcatgggttgccacctgaatttt
tgatcttagccactttaactggtgtgaggtggaatctcagggttgtttta
atttgcatttccctgatgattaaggatgttgaacattttttcaggtgctt
atcagccatttgatattcctcaggtgaaaattatttgtatagctctgagt
cccattttttaatggggttatttaattttctggagtccaccttcttggat
tccttatatatattggatattagtcccctatctgatttaggataggtaaa
gatcctttcctaatctgttggtggccttttttgtcttattgacggtgtct
tttgcctcgcagaagctttgcaattttatgagatctcctttgattctaga
tcttgtagcacaagccattgctgttctatacaggaatttttcccctgtgc
ccaaatcttcgaggcttttccccactttctcatctgtaagtttcactgtt
ctggttttatgggtattagtcccctatctgatttaggataggtaaagatc
ctttcctaatctgttgggggcctttttgtcttattgacagtgtcttttgc
cttgcagaagctttccaattttatgagaactcctttgattcttgatctta
tagcacaagccattgctgttcaatacaggaatttttcccctgtgcccata
tcttcgaggcttttccccactttctcaactgtaagtttcactgttctggt
tttatgtagagttccttaattcacttagatttgactttagtacaggagat
aggaatggatcaattcgcattcttctacatgataaccaccagttgtgcca
gcaccatttgttgaaaatgctgtctttttccactggatggtttagctccc
ttgtcaaagatcaattgatcatatgtgtgtgggttcatttctgggtcttc
aatctaatcc
gaattcatttttatgcaaaattaaggtttttttggtataaatttcttcta
ttgatagaaagaccttaagactacatggcttagacccagtccttctataa
ctattattataaattgatcttagatgtataagcctttgtgttaaggacca
aatagaaaatccatagctctgagtttattattagggtgttttcagatatt
ataattagaaataggtgagagtagttaatgaagaagagttcagattactt
tacatagatagttgattttcaaaagtgtcagaagtccacagaatgtgaca
tttaatgttatttattcacttgttaagacaagtctgcttctgacaacatt
caattgtggtgatttaactgggtttcagagagaaagttatggcagcaaat
cctgagtttgcctgatgtgtaccaccaaggccatgggggctttgaagcat
ggggctgttgtagtaacaacctgccagtggtaacctagggagctgggtgg
agagatatggaattctgagtcagagtcttcatgaaattaaaaacaggtca
gccattccccccaccagtgcatggttgccctggcccatggggcagagggt
tgctggcagtagtgtgggaagcctgctggtcatcaagagttttgcttcta
ctgggttactgggtgttgtgacagctgaccacagggagagcaatcattgt
gtggggctggcatggcagtaatccacaaagggaactggggaacacccact
agtccagagaggctatgtagttgagatctcctggctggagacatgtggct
tgccattgtctggtagtagtatgggaatgtgtcagtttttttttttttaa
tatttcacgcaacagactccaaatctttaagtctaagtatgctgctacga
ggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835676_18836197
seq2: B6Ng01-107G07.b_44_564 (reverse)

seq1  AAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGC  50
      |||||||| |||||| |||||| ||||||||| |||||| | ||||||||
seq2  AAAAGCCTCGAAGATTTGGGCACAGGGGAAAAATTCCTGTATAGAACAGC  50

seq1  AATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAAC  99
      |||||| ||||||   || |  |||||   |||| | || || || ||| 
seq2  AATGGCTTGTGCTACAAGATCTAGAAT---CAAAGGAGATCTCATAAAAT  97

seq1  TCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGAC-AAAAAGACC  148
      | ||||| |||||| ||||||||||||||||||||||||| |||||| ||
seq2  TGCAAAGCTTCTGCGAGGCAAAAGACACCGTCAATAAGACAAAAAAGGCC  147

seq1  ACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGAC  198
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGATTAGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGAC  197

seq1  TAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCA  248
      |||||||||| |||||||| |||  |||||||||||||| |||||||| |
seq2  TAATATCCAATATATATAAGGAATCCAAGAAGGTGGACTCCAGAAAATTA  247

seq1  AATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTCTCACC  298
      |||||||||||||| ||||||| |||||| ||  ||||| |||| |||||
seq2  AATAACCCCATTAAAAAATGGGACTCAGAGCTATACAAATAATTTTCACC  297

seq1  TGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCT  348
      ||||||||| | |||||| || ||||||||||||||||||||||||||||
seq2  TGAGGAATATCAAATGGCTGATAAGCACCTGAAAAAATGTTCAACATCCT  347

seq1  TAATCATCAGGGAAATGGAAATCAAAACAACCCTGAGATTCCACCTCACA  398
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  TAATCATCAGGGAAATGCAAATTAAAACAACCCTGAGATTCCACCTCACA  397

seq1  CCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCG  448
      ||||| | | |||||||||||||||||||||||| || |  |||||||| 
seq2  CCAGTTAAAGTGGCTAAGATCAAAAATTCAGGTGGCAACCCATGCTGGCA  447

seq1  TGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGC  498
       ||||||||||||||||||||||||| ||||||||||||| |||||| ||
seq2  AGGATGTGGAGAAAGAGGAACACTCCCCCATTGTTGGTGGTATTGCAAGC  497

seq1  TTGTACAACCACTCTGGAAATCCG  522
      ||||||||||||||||||| ||||
seq2  TTGTACAACCACTCTGGAATTCCG  521

seq1: chr4_70765431_70765948
seq2: B6Ng01-107G07.g_457_971

seq1  GGCAGCAAATCCTGAGTTTGCCTGATGTGTACCACCAAGGCCATGGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAAATCCTGAGTTTGCCTGATGTGTACCACCAAGGCCATGGGGGC  50

seq1  TTTGAAGCATGGGGCTGTTGTAGTAACAACCTGCCAGTGGTAACCTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCATGGGGCTGTTGTAGTAACAACCTGCCAGTGGTAACCTAGGG  100

seq1  AGCTGGGTGGAGAGATATGGAATTCTGAGTCAGAGTCTTCATGAAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTGGAGAGATATGGAATTCTGAGTCAGAGTCTTCATGAAATTAA  150

seq1  AAACAGGTCAGCCATTCCCCCCACCAGTGCATGGTTGCCCTGGCCCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGTCAGCCATTCCCCCCACCAGTGCATGGTTGCCCTGGCCCATGG  200

seq1  GGCAGAGGGTTGCTGGCAGTAGTGTGGGAAGCCTGCTGGTCATCAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGGTTGCTGGCAGTAGTGTGGGAAGCCTGCTGGTCATCAAGAGT  250

seq1  TTTGCTTCTACTGGGTTACTGGGTGTTGTGACAGCTGACCACAGGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTACTGGGTTACTGGGTGTTGTGACAGCTGACCACAGGGAGAG  300

seq1  CAATCATTGTGTGGGGCTGGCATGGCAGTAATCCACAAAGGGAACTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTGTGTGGGGCTGGCATGGCAGTAATCCACAAAGGGAACTGGGG  350

seq1  AACACCCACTAGTCCAGAGAGGCTATGTAGTTGAGATCTCCTGGCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCACTAGTCCAGAGAGGCTATGTAGTTGAGATCTCCTGGCTGGAG  400

seq1  ACATGTGGCTTGCCATTGTCTGGTAGTAGTATGGAAATGTGTCAGGTTTT  450
      |||||||||||||||||||||||||||||||||| ||||||||||  |||
seq2  ACATGTGGCTTGCCATTGTCTGGTAGTAGTATGGGAATGTGTCAG--TTT  448

seq1  TTTTTTTTTTAATATTTCACGCAACAGACTCCAAATCATTAAGTCTTAAG  500
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TTTTTTTTTTAATATTTCACGCAACAGACTCCAAATCTTTAAGTC-TAAG  497

seq1  TATGCTGCTACGAGGATT  518
      ||||||||||||||||||
seq2  TATGCTGCTACGAGGATT  515