BAC Information

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BAC

Clone NameB6Ng01-107K07
Chromosome6 (Build37)
Map Location 128,459,712 - 128,600,140
singlet/doubletdoublet
Overlap genePzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878
Upstream geneEfcab4b, Prmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598
Downstream geneLOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107K07.bB6Ng01-107K07.g
ACCDH915050DH915051
length1,1321,147
definitionDH915050|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K07, 5' end.DH915051|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,459,712 - 128,460,860)(128,598,974 - 128,600,140)
sequence
gaattctaatcctggatacctagacctggaaatcattaagtgtgttattt
tatatggcaataaagcctttgcagatgttaaaccaggaccatgagatgtg
aaaattgttttgagctacccaggtggtgtcaatgtcattctaaggatggt
tataaaagggagacaggcaggtgaggtttgaagatggagtgctgcgtgct
agctttgaaggttaaaggaagggagtggcagaggtgtttaggcaaagcaa
gaacattgggtcttctctggagttcaagatctaaggtagtcctgccaaga
aacctgtgttgttatgtgcccggaaatgtgtactaacccatcagggcagc
aatagggatccaacacacaaattcatgaagaaaaatggcttccatcattt
ttttttacatttttgattttttctttttgaaaataattatgaaattagta
tactttacttcagaaataaaaccctaaaatccagaaatgttctgacagct
tcctcactggacaacagagggctgccatgcactcccactttgctcagatg
ttgaggtttgacaagatgagaatacattaaaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaatgaaaagcaagagatgctta
ctgtttccttgttcaagcgacaacacatggcttcctaagttgaagatgct
tccccttgctttgatctgaagacagaaggaaatacacccattagcattgt
gaggtctgtctgcccagacaggttaaggtatgtctgttagcatactcatg
atatataaatagctctcatgctgctccaactcagaagtaatttttattac
catatttcctttccatcattttcatatgtgtgtgtgtttcaaataacaag
tacataatgaacacaacatggtactcactcactgataagtggatatagcc
caaaagctcggaatacccaagatacaattcccagcccacagaggaagact
aaagtgtgggtgctcctgtccttcttagaggggaacaaatactcacagga
gtaaataggagattaggtgtggaacagaactgaagaaaggccatcaggac
tgcccacctgggatcatccattacagaaccaa
gaattccaaagagagcccaataaagttatttccttaaaaggagaagagac
agtaacctaggactttcctcaaaagagtcagacataattttctcaggaaa
gacataaaatgaaccataatgcaggaagtccccatgaatgaaatatgaag
ggactaaaaccaaagcgtgaagacagaaggacagcgattgcagcagcccg
ctcagctccactggaactgtgtcaaaaagctgtgctggtttcataccttt
catcctttctggttcatggctgtgccagtcactgttttaccagagttaaa
ttactagatcaccagagttccattgattgattgttaaaacttggaccttt
agaagtcttaatagcatatttatcttttaagacacttatgacttgtataa
acttcaaacttttttcttaatcattgcaaagcaagtttttttttattatt
aaaacaatggaacagtaaagttatactgaaatctgtttgtgttttaatat
gaggcctgtcagcaaagcaaacttgtctatgagtttccctttctcactgg
gagatagaggaggtctaacaaagcatggcctgattttcctatttcaaatg
cattaaaccgagaaagctacagttaaccatcaataccaccagaaatctga
gaaggataaatttgaacagaatgtataaaccaaaatagcctctgtatcaa
tacaatgacaaagacttgccctagtagaaggagtggcttctgtcttcagt
gatcacacaagacagcattaactctttcactgccacacagcgtagcatgg
acattcagctgccatgccctgaagattcctgtgggtgaggaacatgaaag
cctgacccacattgcaagggaaagactggcagtcaattcttcagtaccct
ccttgcccacagtctcagtgggttcctccagtgggtgagcatgaggcagt
ctacttcagtggctagcattatcagtaatccaggtggattcatgtctttg
atgagactagctgctgtagtgttatgcccaggtcttcgggtgcccagaac
tcttagagttgcagcccgaggtactataacagagagaaattttttttctg
agcagactgatctcagctctcatggtgcaggtagatgcgatgctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128459712_128460860
seq2: B6Ng01-107K07.b_42_1173

seq1  GAATTCTAATCCTGGATACCTAGACCTGGAAATCATTAAGTGTGTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCCTGGATACCTAGACCTGGAAATCATTAAGTGTGTTATTT  50

seq1  TATATGGCAATAAAGCCTTTGCAGATGTTAAACCAGGACCATGAGATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGCAATAAAGCCTTTGCAGATGTTAAACCAGGACCATGAGATGTG  100

seq1  AAAATTGTTTTGAGCTACCCAGGTGGTGTCAATGTCATTCTAAGGATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTTTGAGCTACCCAGGTGGTGTCAATGTCATTCTAAGGATGGT  150

seq1  TATAAAAGGGAGACAGGCAGGTGAGGTTTGAAGATGGAGTGCTGCGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGGGAGACAGGCAGGTGAGGTTTGAAGATGGAGTGCTGCGTGCT  200

seq1  AGCTTTGAAGGTTAAAGGAAGGGAGTGGCAGAGGTGTTTAGGCAAAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAAGGTTAAAGGAAGGGAGTGGCAGAGGTGTTTAGGCAAAGCAA  250

seq1  GAACATTGGGTCTTCTCTGGAGTTCAAGATCTAAGGTAGTCCTGCCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTGGGTCTTCTCTGGAGTTCAAGATCTAAGGTAGTCCTGCCAAGA  300

seq1  AACCTGTGTTGTTATGTGCCCGGAAATGTGTACTAACCCATCAGGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGTTGTTATGTGCCCGGAAATGTGTACTAACCCATCAGGGCAGC  350

seq1  AATAGGGATCCAACACACAAATTCATGAAGAAAAATGGCTTCCATCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGATCCAACACACAAATTCATGAAGAAAAATGGCTTCCATCATTT  400

seq1  TTTTTTACATTTTTGATTTTTTCTTTTTGAAAATAATTATGAAATTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACATTTTTGATTTTTTCTTTTTGAAAATAATTATGAAATTAGTA  450

seq1  TACTTTACTTCAGAAATAAAACCCTAAAATCCAGAAATGTTCTGACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACTTCAGAAATAAAACCCTAAAATCCAGAAATGTTCTGACAGCT  500

seq1  TCCTCACTGGACAACAGAGGGCTGCCATGCACTCCCACTTTGCTCAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTGGACAACAGAGGGCTGCCATGCACTCCCACTTTGCTCAGATG  550

seq1  TTGAGGTTTGACAAGATGAGAATACATTAAAAAGAAAGAAAGAAAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTGACAAGATGAGAATACATTAAAAAGAAAGAAAGAAAGAAAG  600

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAATGAAAAGCAAGAGATGCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAATGAAAAGCAAGAGATGCTTA  650

seq1  CTGTTTCCTTGTTCAAGCGACAACACATGGCTTCCTAAGTTGAAGATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTTGTTCAAGCGACAACACATGGCTTCCTAAGTTGAAGATGCT  700

seq1  TCCCCTTGCTTTGATCTGAAGACAGAAGGAAATACACCCATTAGCATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTGCTTTGATCTGAAGACAGAAGGAAATACACCCATTAGCATTGT  750

seq1  GAGGTCTGTCTGCCCAGACAGGTTAAGGTATGTCTGTTAGCATACTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGTCTGCCCAGACAGGTTAAGGTATGTCTGTTAGCATACTCATG  800

seq1  ATATATAAATAGCTCTCATGCTGCTCCAACTCAGAAGTAATTTTTATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAATAGCTCTCATGCTGCTCCAACTCAGAAGTAATTTTTATTAC  850

seq1  CATATTTCCTTTCCATCATTTTCATATGTGTGTGTGTTTCAAATAACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCTTTCCATCATTTTCATATGTGTGTGTGTTTCAAATAACAAG  900

seq1  TACATAATGAACACAACATGGTACTCACTCACTGATAAGTGGATATTAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACATAATGAACACAACATGGTACTCACTCACTGATAAGTGGATA-TAGC  949

seq1  CCAAAAGCTCGGAATACCCAAGATACAATTCCCAGCCCACAAGAAGGAAG  1000
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  CCAAAAGCTCGGAATACCCAAGATACAATTCCCAGCCCACA--GAGGAAG  997

seq1  ACTAAAGTGTGGGTGCTCCTGTCCTTCTTAGAAGGGGGAACAAAATACTC  1050
      ||||||||||||||||||||||||||||||||  ||||||| ||||||||
seq2  ACTAAAGTGTGGGTGCTCCTGTCCTTCTTAGA--GGGGAAC-AAATACTC  1044

seq1  ACAGGAGTAAATAGGGAGATAAAGTGTGGAACAGAGACTGAAGAAAAGGC  1100
      ||||||||||||| |||||| | |||||||||||| ||||||| ||||||
seq2  ACAGGAGTAAATA-GGAGATTAGGTGTGGAACAGA-ACTGAAG-AAAGGC  1091

seq1  CATCCAGAGACTGCCCCACCTGGGGATCCATCCCATATACAGACACCAA  1149
      ||| ||| ||||| ||||||| ||||| ||| |||| |||||| |||||
seq2  CAT-CAG-GACTG-CCCACCT-GGGAT-CAT-CCAT-TACAGA-ACCAA  1132

seq1: chr6_128598974_128600140
seq2: B6Ng01-107K07.g_68_1214 (reverse)

seq1  TCCAGCATCGCATTCCTAACCTGCACAATGGAGAAGGCTTGAGATCAGGT  50
      |||||||||||||  || |||||||| || ||||  || |||||||| ||
seq2  TCCAGCATCGCAT--CT-ACCTGCACCAT-GAGA--GC-TGAGATCA-GT  42

seq1  CTGGCTCATGAAAAAAAAATGTCTCTCCTTGTTATAGTACTTCGGGCTGG  100
      || |||||   ||||||||| ||||||  ||||||||||| ||||||| |
seq2  CT-GCTCA--GAAAAAAAATTTCTCTC--TGTTATAGTACCTCGGGCT-G  86

seq1  CAACTCTTAAGAGTTCTGGGGCACCCG-AGACCTGGGCATAACACTAACA  149
      |||||| |||||||||| ||||||||| |||||||||||||||||| |||
seq2  CAACTC-TAAGAGTTCT-GGGCACCCGAAGACCTGGGCATAACACT-ACA  133

seq1  GCAGCCTTAGTCTCATTCAAAGACATGAATCCACCTGGATTACTGATAAT  199
      |||||  |||||||| ||||||||||||||||||||||||||||||||||
seq2  GCAGC--TAGTCTCA-TCAAAGACATGAATCCACCTGGATTACTGATAAT  180

seq1  GCTAGCCACTGAAGTAGACTGCCTCATGCCTCACCCACTGGAGGAACCCA  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTAGCCACTGAAGTAGACTGCCTCATG-CTCACCCACTGGAGGAACCCA  229

seq1  CTGAGACTGTGGGCAAGGAGGGTACTGAAGAATTGACTGCCAGTCTTTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTGTGGGCAAGGAGGGTACTGAAGAATTGACTGCCAGTCTTTCC  279

seq1  CTTGCAATGTGGGTCAGGCTTTCATGTTCCTCACCCACAGGAATCTTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATGTGGGTCAGGCTTTCATGTTCCTCACCCACAGGAATCTTCAG  329

seq1  GGCATGGCAGCTGAATGTCCATGCTACGCTGTGTGGCAGTGAAAGAGTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGCAGCTGAATGTCCATGCTACGCTGTGTGGCAGTGAAAGAGTTA  379

seq1  ATGCTGTCTTGTGTGATCACTGAAGACAGAAGCCACTCCTTCTACTAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTTGTGTGATCACTGAAGACAGAAGCCACTCCTTCTACTAGGG  429

seq1  CAAGTCTTTGTCATTGTATTGATACAGAGGCTATTTTGGTTTATACATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTTGTCATTGTATTGATACAGAGGCTATTTTGGTTTATACATTC  479

seq1  TGTTCAAATTTATCCTTCTCAGATTTCTGGTGGTATTGATGGTTAACTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAATTTATCCTTCTCAGATTTCTGGTGGTATTGATGGTTAACTGT  529

seq1  AGCTTTCTCGGTTTAATGCATTTGAAATAGGAAAATCAGGCCATGCTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCGGTTTAATGCATTTGAAATAGGAAAATCAGGCCATGCTTTG  579

seq1  TTAGACCTCCTCTATCTCCCAGTGAGAAAGGGAAACTCATAGACAAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTCCTCTATCTCCCAGTGAGAAAGGGAAACTCATAGACAAGTTT  629

seq1  GCTTTGCTGACAGGCCTCATATTAAAACACAAACAGATTTCAGTATAACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTGACAGGCCTCATATTAAAACACAAACAGATTTCAGTATAACT  679

seq1  TTACTGTTCCATTGTTTTAATAATAAAAAAAAACTTGCTTTGCAATGATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTCCATTGTTTTAATAATAAAAAAAAACTTGCTTTGCAATGATT  729

seq1  AAGAAAAAAGTTTGAAGTTTATACAAGTCATAAGTGTCTTAAAAGATAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAGTTTGAAGTTTATACAAGTCATAAGTGTCTTAAAAGATAAA  779

seq1  TATGCTATTAAGACTTCTAAAGGTCCAAGTTTTAACAATCAATCAATGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTATTAAGACTTCTAAAGGTCCAAGTTTTAACAATCAATCAATGGA  829

seq1  ACTCTGGTGATCTAGTAATTTAACTCTGGTAAAACAGTGACTGGCACAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGTGATCTAGTAATTTAACTCTGGTAAAACAGTGACTGGCACAGC  879

seq1  CATGAACCAGAAAGGATGAAAGGTATGAAACCAGCACAGCTTTTTGACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCAGAAAGGATGAAAGGTATGAAACCAGCACAGCTTTTTGACAC  929

seq1  AGTTCCAGTGGAGCTGAGCGGGCTGCTGCAATCGCTGTCCTTCTGTCTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGTGGAGCTGAGCGGGCTGCTGCAATCGCTGTCCTTCTGTCTTC  979

seq1  ACGCTTTGGTTTTAGTCCCTTCATATTTCATTCATGGGGACTTCCTGCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTTGGTTTTAGTCCCTTCATATTTCATTCATGGGGACTTCCTGCAT  1029

seq1  TATGGTTCATTTTATGTCTTTCCTGAGAAAATTATGTCTGACTCTTTTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTCATTTTATGTCTTTCCTGAGAAAATTATGTCTGACTCTTTTGA  1079

seq1  GGAAAGTCCTAGGTTACTGTCTCTTCTCCTTTTAAGGAAATAACTTTATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTCCTAGGTTACTGTCTCTTCTCCTTTTAAGGAAATAACTTTATT  1129

seq1  GGGCTCTCTTTGGAATTC  1167
      ||||||||||||||||||
seq2  GGGCTCTCTTTGGAATTC  1147