BAC Information

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BAC

Clone NameB6Ng01-108E18
Chromosome6 (Build37)
Map Location 95,479,058 - 95,480,209
singlet/doubletsinglet
Overlap geneSuclg2
Upstream geneSlc25a26, Lrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912
Downstream geneLOC665886, LOC545867, C630007B19Rik, LOC100043685, 1700123L14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108E18.bB6Ng01-108E18.g
ACCDH915519DH915520
length1,1401,142
definitionDH915519|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E18, 5' end.DH915520|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcattcatacacacacacacacacacacacacacgcacaca
cacacatatgtaaaaattaatagacataaaggaaccggtcctgttaagcc
tttcctttatgtttagttgactactatcccagccattgtaaactgcatca
ccctccctctcctatcccagtgctggaagatagttctagctcatttttat
tgggcccccatacatgtaatgcatatatgacaatctagctgtctaccctc
agctagcctcctgtttcaggttcctgagagctaaaggaagatatgcacct
tcatacccagaggttattgtagtcttaccctctgttcacttcctttcaca
gattcctgtgtagatgcttgggcattggcctttcaaagagatttctacta
attatttctttgttcgatttgcgtatgcagcaagtgcgtatgcgttcaca
ctggactggcatgggcctgcaggatcagtgctccccagcttttcctttcc
aaggactttgtcaacattgagtgtgtgttctggcatcttggatttgccct
ggtgggttatttttaataatgccaaaagatacaaaaagcctttacactta
attaagccagttattaagccaacatgtagacaccagcaaagtgactatat
tctcacaggaatgaattaactaggtatcactatgcaaaagaaattccctg
ggattttcttctccaccagtaagtgctagtcttctggctatttgagggtt
tgcttcattaatgcaagaggcagctctaccccacactcactgtctctgca
gaccttcattctcttcagaaagaagtagccttccttccccacacagcagc
ttttaagtggaggtcactgtaccttcatcgtggcccctcccgctttcttc
tcctggtccaaagcctccatctcacccactatcatttgatcccttgatct
ttgttcctcctagctgaattcttaccagatgtcttcctttcaactcctat
taccactggtggtggataagaatagaaaccttaacagctaacatttccta
gagccaggtgtgatggcgcacaccttactcagggggcagagcaagcgatt
tgagtcagaacagcctggtcttacaagtgggttccaagac
gaattccagttatcactcccagtactctcttcctccaccattcacctgat
ccttcctattcccttctccaccatatttacccttcccagggagattcatg
ggttctcctctgatccctccttgttactgggcctctctgggttatgattt
agtttatatctaatgtctacttaaaagtgagtgcataccatgtttgtctt
tctgggtctggggtacctaactcagattgttttgttttgttttgttttgt
tttttctagttctatccttttgcctgcaatttttatgattttttttgttg
ttgttaaaaacagctgagttatactttgttgtgtaaatgcaccacatttc
cttaaatcattattcagttgaggaatatgtaggttgcttctagtttctgg
caatagccacaataaggctgttgtgaacatagctgaacaagtgtccttgt
ggtaggttggaggattcttttgggtcttgagatagaattcttcctgattt
tctgagaaactgctatattgatttcaaaagtggctgatcaagtttgcact
tccactaacaatggaggagtgcttccccagctccacaaccttgccagcat
gactgtcactgtgtttttttatcttatccattctgacaagtaagcgtaga
tgggatctcagagtcattttgatttgcatttccctaaagactaagaatgt
tgaatatttctttaaatgtttcttggtcacttgagattctgtgttgaaaa
ttctctatttagatctgtaccccatttttaaactgaattacttctctttt
tgatatctactttcttcatgtctttatatattttggatattagccctctg
tcagatgtgaagttggtgaaaatctttcccattccataggctacagtttt
gtcctgttgacagtttcctttgtctacagaaacttttcagtttcatggag
gtcccatttataatgtccatcttacttgctgtggatataatgttctgtag
gaacagtatctcctgtcacgtaatcagggctatctctctataggttcagc
atattcatgttttctgggagaagatcaagcttcttattttcttttctctt
tgtttaagggtgggggttctactgcaggacgtactagtgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_95479058_95480209
seq2: B6Ng01-108E18.b_45_1184 (reverse)

seq1  GTCTTGGAACCCACTTTGTAGACCAGGCTGGTCTCGAACTCAGAAATCCG  50
      ||||||||||||||||   ||||||||||| |||   ||||  |||| ||
seq2  GTCTTGGAACCCACTTGTAAGACCAGGCTGTTCT--GACTC--AAAT-CG  45

seq1  CCTGCTTCTGCCTCCTGAGTAAAGGTGTGCGCCATCACACCTGGCTCTAG  100
      | ||| |||||| ||||||| |||||||||||||||||||||||||||||
seq2  CTTGC-TCTGCCCCCTGAGT-AAGGTGTGCGCCATCACACCTGGCTCTAG  93

seq1  GAAATGTTTAGCTGTTAAGGTTTCTATTCTTATTCCACCACCAGTGGTAA  150
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  GAAATG-TTAGCTGTTAAGGTTTCTATTCTTA-TCCACCACCAGTGGTAA  141

seq1  TAGGAGGTTGAAAGGAAGACATTCTGGTAAGAATTCAGCTAGGAGGAACA  200
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAGGA-GTTGAAAGGAAGACA-TCTGGTAAGAATTCAGCTAGGAGGAACA  189

seq1  AAGATCAAGGGATCAAAATGATAGTGGGTGAGATGGAGGCTTTGGACCAG  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGATCAAGGGATC-AAATGATAGTGGGTGAGATGGAGGCTTTGGACCAG  238

seq1  GAGAAGAAAGCGGGAGGGGCCACGATGAAGGTACAGTGACCTCCACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAAGCGGGAGGGGCCACGATGAAGGTACAGTGACCTCCACTTAA  288

seq1  AAGCTGCTGTGTGGGGAAGGAAGGCTACTTCTTTCTGAAGAGAATGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCTGTGTGGGGAAGGAAGGCTACTTCTTTCTGAAGAGAATGAAGG  338

seq1  TCTGCAGAGACAGTGAGTGTGGGGTAGAGCTGCCTCTTGCATTAATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGAGACAGTGAGTGTGGGGTAGAGCTGCCTCTTGCATTAATGAAG  388

seq1  CAAACCCTCAAATAGCCAGAAGACTAGCACTTACTGGTGGAGAAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTCAAATAGCCAGAAGACTAGCACTTACTGGTGGAGAAGAAAAT  438

seq1  CCCAGGGAATTTCTTTTGCATAGTGATACCTAGTTAATTCATTCCTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAATTTCTTTTGCATAGTGATACCTAGTTAATTCATTCCTGTGA  488

seq1  GAATATAGTCACTTTGCTGGTGTCTACATGTTGGCTTAATAACTGGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTCACTTTGCTGGTGTCTACATGTTGGCTTAATAACTGGCTTA  538

seq1  ATTAAGTGTAAAGGCTTTTTGTATCTTTTGGCATTATTAAAAATAACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGTAAAGGCTTTTTGTATCTTTTGGCATTATTAAAAATAACCCA  588

seq1  CCAGGGCAAATCCAAGATGCCAGAACACACACTCAATGTTGACAAAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAAATCCAAGATGCCAGAACACACACTCAATGTTGACAAAGTCC  638

seq1  TTGGAAAGGAAAAGCTGGGGAGCACTGATCCTGCAGGCCCATGCCAGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGGAAAAGCTGGGGAGCACTGATCCTGCAGGCCCATGCCAGTCC  688

seq1  AGTGTGAACGCATACGCACTTGCTGCATACGCAAATCGAACAAAGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAACGCATACGCACTTGCTGCATACGCAAATCGAACAAAGAAATA  738

seq1  ATTAGTAGAAATCTCTTTGAAAGGCCAATGCCCAAGCATCTACACAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGAAATCTCTTTGAAAGGCCAATGCCCAAGCATCTACACAGGAA  788

seq1  TCTGTGAAAGGAAGTGAACAGAGGGTAAGACTACAATAACCTCTGGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAAGGAAGTGAACAGAGGGTAAGACTACAATAACCTCTGGGTAT  838

seq1  GAAGGTGCATATCTTCCTTTAGCTCTCAGGAACCTGAAACAGGAGGCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGCATATCTTCCTTTAGCTCTCAGGAACCTGAAACAGGAGGCTAG  888

seq1  CTGAGGGTAGACAGCTAGATTGTCATATATGCATTACATGTATGGGGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGTAGACAGCTAGATTGTCATATATGCATTACATGTATGGGGGCC  938

seq1  CAATAAAAATGAGCTAGAACTATCTTCCAGCACTGGGATAGGAGAGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAATGAGCTAGAACTATCTTCCAGCACTGGGATAGGAGAGGGAG  988

seq1  GGTGATGCAGTTTACAATGGCTGGGATAGTAGTCAACTAAACATAAAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGCAGTTTACAATGGCTGGGATAGTAGTCAACTAAACATAAAGGA  1038

seq1  AAGGCTTAACAGGACCGGTTCCTTTATGTCTATTAATTTTTACATATGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTAACAGGACCGGTTCCTTTATGTCTATTAATTTTTACATATGTG  1088

seq1  TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATGAAGAGAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATGAAGAGAAT  1138

seq1  TC  1152
      ||
seq2  TC  1140