BAC Information

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BAC

Clone NameB6Ng01-108H02
Chromosome6 (Build37)
Map Location 129,083,895 - 129,084,230
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1
Downstream geneClec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108H02.bB6Ng01-108H02.g
ACCDH915628DH915629
length3361,227
definitionDH915628|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H02, 5' end.DH915629|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ataatagctctgttaagagtagtaggtcgaggtaaagtggtttctaataa
agatgcttacaaatgcttctgtgatacaaagtgtgaactgtgaaaaacaa
ccagagctaagtgtcctttattcatatgaaggtgaagcaaattgaccaca
tgttggttacagaatatgaggagcaacatcaactactgcacagtaatgta
gccattttgcgccgataaaaagaaaactatcctgagattgaactcctgga
gaatttagctgtggtattgagctaattatgtctttgattgtctgattgtt
agaatgtttgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctgcagaggaaggggcagaaagatcgcaagaaccggtggggatga
agaccaccaaggaaacaagaccttgtagacacaacaggacttaggcacat
aggagctcacagagactggagtagcatgctcagggcctgtccaggtccaa
gttatatgggggtcacagcactgagagtgaaagtgaatacaagctcccat
ccttaatccagaagctatctcccactgatatccacttgcaaaggaaaaag
catttttcttcattggtcttactaggcacacaaatcacacaactagaacc
tatgcccagcagtagatgatcaacaggaaacacactcaaggtattttaag
atgtatttttgtcacatagttgtcaggagccatcatgggacaagctaata
actagcaggggatcatcctgaagtggcctgcctcggattattatataatc
tgcgacaggtgagccctcattaagcaaggttatgagtgactcattttagg
aaagattccttctattaatgtgcttttcctgttattattaaacatatata
acaatccctaagtagtagcacaccccattagagcaaatctctgcagatcc
ttgaagatctactatcttgtagtgatgctatatagacaaataaatgactt
aagtattaatgatgattctataagaattcctaaaattatatctgtgatta
ttaagcttttttagaatggggctgctattaggtccttttctgatagtcaa
agctgcaatgagaactctatcaatctcccaagtgtcacccattaattgct
cctagatggtaaccagactttctcctactcagagcgcattccaagaaggc
cataaaagggaactaatgatttattatatgtgttaggacagaagataaaa
atatcaagtggggtttatctgtacaaaacttcactactaacttagttatg
ggtttaaaccctttagtgaacctgttgggagctgagacaggtgatggatg
tttagccaaataatcacctcctactggatacccatgtaacattcactatg
taaacttctattcattatgattaggtattttggatgaccttttacatgta
ttctgatggatgtagagctgagacaaagaagagtccgaactgaggaactg
gggagagaatgggagggtgaactgaacctggaaaggacatacgtggaaaa
gtgttgagcagagcacaccttttaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129083895_129084230
seq2: B6Ng01-108H02.b_50_385 (reverse)

seq1  CACACACACACACACACACACACACACAAACATTCTAACAATCAGACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAAACATTCTAACAATCAGACAAT  50

seq1  CAAAGACATAATTAGCTCAATACCACAGCTAAATTCTCCAGGAGTTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACATAATTAGCTCAATACCACAGCTAAATTCTCCAGGAGTTCAAT  100

seq1  CTCAGGATAGTTTTCTTTTTATCGGCGCAAAATGGCTACATTACTGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGATAGTTTTCTTTTTATCGGCGCAAAATGGCTACATTACTGTGCA  150

seq1  GTAGTTGATGTTGCTCCTCATATTCTGTAACCAACATGTGGTCAATTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGATGTTGCTCCTCATATTCTGTAACCAACATGTGGTCAATTTGC  200

seq1  TTCACCTTCATATGAATAAAGGACACTTAGCTCTGGTTGTTTTTCACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTTCATATGAATAAAGGACACTTAGCTCTGGTTGTTTTTCACAGT  250

seq1  TCACACTTTGTATCACAGAAGCATTTGTAAGCATCTTTATTAGAAACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTTTGTATCACAGAAGCATTTGTAAGCATCTTTATTAGAAACCAC  300

seq1  TTTACCTCGACCTACTACTCTTAACAGAGCTATTAT  336
      ||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCGACCTACTACTCTTAACAGAGCTATTAT  336