BAC Information

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BAC

Clone NameB6Ng01-108I15
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108I15.bB6Ng01-108I15.g
ACCDH915698DH915699
length9911,241
definitionDH915698|Mus musculus domesticus DNA, BAC clone: B6Ng01-108I15, 5' end.DH915699|Mus musculus domesticus DNA, BAC clone: B6Ng01-108I15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagaccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggttgtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactcgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgatttcactagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctgtaatttttttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcactccgagatattttatattat
ttgtgactattgagaagggtgtgtttccctatttctttctc

gaattcaacacaccactttcttcaaaggacaaatggtggaaacagaaact
aaacagggacacagtgaaaataacagaagttatgaaacaaagggatttaa
cagatatctagagaacattttccctaaaacaaaaggatatatcttcttct
cagcacctcacagaaccttctacaaaattgaccatataattggtaacaaa
acagacctcaacagatacaaaaatattgaaattgtcccgtgcatactatc
agatcaccatggactaaggcttatcttcaataacaacataaataatgaaa
agccaacattcacgtggaaactgaacaacactcttctcaatgataccttg
gtcaaggaaggaataaagaaaaaattaaagactttttagaacttaatgaa
aatgaagccacaacgtacccaaacttatgggacacaatgaaagcctttct
aagagggaaactcatagctctgagtgcctccaaaaagaatctagagacag
cacacactagcagcttgacaacacatctaaaagatctagaacaaaaggaa
gcaaattcacccaagaggagtagacagcaggaaatgatcaaacacagggg
tgaaatcaacaaagtggaaacaagaagactattcaaagaatcaactaaat
gaggagctggttctgtgagaaaatcaacaggatcaataaacccttagcca
gactcactagagggcacagggacggcatcctaattaacaaattcagaaat
gagaagggaaacataacaacagatcctgaagaaatccacaacaccatcag
atccttctacaaaaggctatactcaacaaaactggaaaacctggatgaaa
tgaacaaatttctggacagataccaggtaccatagttaaatcagatgagt
ttaatgatctaaacattcctatatgccctaaagaaatagaagcagtcctt
atagtctcccaaccaaaaaaaaaaaaaaaaaagccaggacagatggattt
agtgcagagtctatcagactttcaagaagatctaatccagttctgcacaa
ctatccacaaaatagaagcagagtactctaccaatcattctatggagtca
caattactctgatataaccagaagaccaacaagatagagaactcgacatc
cttgaatctatggcaaattcgaacctgagccttacatgacatgcaacaac
actcttggttctggaaccgtcggagagatatcctgcccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-108I15.b_42_559 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAGAGACAACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGTCTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


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