BAC Information

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BAC

Clone NameB6Ng01-108P02
Chromosome6 (Build37)
Map Location 65,163,563 - 65,163,989
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid2, Atoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858
Downstream geneLOC634745, EG667141, C130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108P02.bB6Ng01-108P02.g
ACCDH915993DH915994
length1,158421
definitionDH915993|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P02, 5' end.DH915994|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
tgtggctattgagaaggtgttgtttccctaatttcttctcagcctgttta
ttctttgtgtagagaaagcattgacttctttgagtaatttatatcagcta
ctcatcgagctgttatcagtttagagtctctgtgatttttaaggtcactt
tatatacatcatatcattgcaaaggaattgaactccctgtcaattgatcc
ctgaattc
aggctcatagatgccattcaaaactgttcagatagctttgtttttgagtg
ttgtgccttgctgaattgcaggcactgaattttaaacaggttcagtatca
tttccttcaaggattaactcatccttttaggcttgagaaacaagtactgg
ccatcaccatctgaacattgtagatctacttgtcaggcaggaaacttcag
attccaaccagagactcattctcctgaataatgatggtgacgagggaggg
aaacaagtgtgcccagaccttattataagctaggtaacaatgatagcact
gcactggacgacttcatgggtagaaagaaaggtgtatttggaggggggtg
aggttaaagctgccatggctatctctcaggatggagaccaaatagcaaac
tacagctgggttgaaggctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_65163563_65163989
seq2: B6Ng01-108P02.g_67_493

seq1  GAATTCAGGCTCATAGATGCCATTCAAAACTGTTCAGATAGCTTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTCATAGATGCCATTCAAAACTGTTCAGATAGCTTTGTTTT  50

seq1  TGAGTGTTGTGCCTTGCTGAATTGCAGGCACTGAATTTTAAACAGGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTGTGCCTTGCTGAATTGCAGGCACTGAATTTTAAACAGGTTCA  100

seq1  GTATCATTTCCTTCAAGGATTAACTCATCCTTTTAGGCTTGAGAAACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTTCCTTCAAGGATTAACTCATCCTTTTAGGCTTGAGAAACAAG  150

seq1  TACTGGCCATCACCATCTGAACATTGTAGATCTACTTGTCAGGCAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCCATCACCATCTGAACATTGTAGATCTACTTGTCAGGCAGGAAA  200

seq1  CTTCAGATTCCAACCAGAGACTCATTCTCCTGAATAATGATGGTGACGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGATTCCAACCAGAGACTCATTCTCCTGAATAATGATGGTGACGAG  250

seq1  GGAGGGAAACAAGTGTGCCCAGACCTTATTATAAGCTAGGTAACAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAACAAGTGTGCCCAGACCTTATTATAAGCTAGGTAACAATGAT  300

seq1  AGCACTGCACTGGACGACTTCATGGGTAGAAAGAAAGGTGTATTTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCACTGGACGACTTCATGGGTAGAAAGAAAGGTGTATTTGGAGG  350

seq1  GGGGTGAGGTTAAAGCTGCCATGGCTATCTCTCAGGAAGCAGACCAAATA  400
      ||||||||||||||||||||||||||||||||||||| | ||||||||||
seq2  GGGGTGAGGTTAAAGCTGCCATGGCTATCTCTCAGGATGGAGACCAAATA  400

seq1  GCAAACTACAGCTGGGTTGAAGGCTGG  427
      |||||||||||||||||||||||||||
seq2  GCAAACTACAGCTGGGTTGAAGGCTGG  427