MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-109G19
Chromosome	6 (Build37)
Map Location	61,471,899 - 61,472,949
singlet/doublet	singlet
Overlap gene	C130092O11Rik
Upstream gene	Snca, ENSMUSG00000064018, Mmrn1, LOC100041756, LOC100041764, LOC100042694
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Snca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20617 MGI:1277151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	ENSMUSG00000064018 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625863 MGI:3701602
definition	note : predicted gene, ENSMUSG00000064018 pseudo : _no_value

name	Mmrn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70945 MGI:1918195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 3 Proteins

name	LOC100041756 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100041764 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	C130092O11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232035 MGI:3045354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 Protein

name	LOC100042694 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein

name	Snca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109638752 GeneID:20617 MGI:1277151
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synuclein, alpha transcript_id : NM_009221.2

name	Snca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109638746 GeneID:20617 MGI:1277151
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synuclein, alpha transcript_id : NM_001042451.1

name	Mmrn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377400 GeneID:70945 MGI:1918195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 36 ESTs, 3 Proteins product : multimerin 1 transcript_id : XM_284198.5

name	LOC100041756 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255163 GeneID:100041756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to H2B histone family, member F transcript_id : XM_001476951.1

name	LOC100041764 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255165 GeneID:100041764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : similar to sterile alpha motif domain containing 1 transcript_id : XM_001476966.1

name	C130092O11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255167 GeneID:232035 MGI:3045354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 1 Protein product : RIKEN cDNA C130092O11 gene transcript_id : XM_988198.2

name	LOC100042694 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255204 GeneID:100042694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 Protein product : hypothetical protein LOC100042694 transcript_id : XM_001478767.1

name	Snca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109638747 GeneID:20617 MGI:1277151
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IDA] GO_process : GO:0042416 - dopamine biosynthesis [Evidence IMP]; GO:0042417 - dopamine metabolism [Evidence IGI]; GO:0006644 - phospholipid metabolism [Evidence IMP]; GO:0001956 - positive regulation of neurotransmitter secretion [Evidence IDA]; GO:0040012 - regulation of locomotion [Evidence IMP]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0042493 - response to drug [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0048489 - synaptic vesicle transport [Evidence IMP] codon_start : 1 note : alpha SYN; alpha-synuclein product : synuclein, alpha protein_id : NP_001035916.1

name	Snca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678047 CCDS:CCDS20201.1 GeneID:20617 MGI:1277151
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IDA] GO_process : GO:0042416 - dopamine biosynthesis [Evidence IMP]; GO:0042417 - dopamine metabolism [Evidence IGI]; GO:0006644 - phospholipid metabolism [Evidence IMP]; GO:0001956 - positive regulation of neurotransmitter secretion [Evidence IDA]; GO:0040012 - regulation of locomotion [Evidence IMP]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence IMP]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0042493 - response to drug [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0048489 - synaptic vesicle transport [Evidence IMP] codon_start : 1 note : alpha SYN; alpha-synuclein product : synuclein, alpha protein_id : NP_033247.1

name	Mmrn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28524459 GeneID:70945 MGI:1918195
definition	codon_start : 1 product : multimerin 1 protein_id : XP_284198.1

name	LOC100041756 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255164 GeneID:100041756
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477001.1

name	LOC100041764 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255166 GeneID:100041764
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477016.1

name	C130092O11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377402 GeneID:232035 MGI:3045354
definition	codon_start : 1 product : hypothetical protein LOC232035 protein_id : XP_993292.1

name	LOC100042694 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255205 GeneID:100042694
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478817.1

name	(CDS detail)
type	STS
link
xref	UniSTS:280385
definition	standard_name : D6Slab3

name	(CDS detail)
type	STS
link
xref	UniSTS:280386
definition	standard_name : D6Slab4

name	(CDS detail)
type	STS
link
xref	UniSTS:280376
definition	standard_name : D6Slab11

name	(CDS detail)
type	STS
link
xref	UniSTS:280377
definition	standard_name : D6Slab12

name	(CDS detail)
type	STS
link
xref	UniSTS:280378
definition	standard_name : D6Slab13

name	(CDS detail)
type	STS
link
xref	UniSTS:280387
definition	standard_name : D6Slab5

name	(CDS detail)
type	STS
link
xref	UniSTS:234029
definition	standard_name : Snca

name	(CDS detail)
type	STS
link
xref	UniSTS:271263
definition	standard_name : PMC153617P1

name	(CDS detail)
type	STS
link
xref	UniSTS:130908
definition	standard_name : D6Mit357

name	(CDS detail)
type	STS
link
xref	UniSTS:234028
definition	standard_name : Snca

name	(CDS detail)
type	STS
link
xref	UniSTS:280388
definition	standard_name : D6Slab6

name	(CDS detail)
type	STS
link
xref	UniSTS:280379
definition	standard_name : D6Slab14

name	(CDS detail)
type	STS
link
xref	UniSTS:280381
definition	standard_name : D6Slab15

name	(CDS detail)
type	STS
link
xref	UniSTS:280380
definition	standard_name : D6Slab15

name	(CDS detail)
type	STS
link
xref	UniSTS:280382
definition	standard_name : D6Slab16

name	(CDS detail)
type	STS
link
xref	UniSTS:280389
definition	standard_name : D6Slab7

name	(CDS detail)
type	STS
link
xref	UniSTS:280390
definition	standard_name : D6Slab8

name	(CDS detail)
type	STS
link
xref	UniSTS:280391
definition	standard_name : D6Slab9

name	(CDS detail)
type	STS
link
xref	UniSTS:224458
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:280375
definition	standard_name : D6Slab10

name	(CDS detail)
type	STS
link
xref	UniSTS:224861
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235458
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130907
definition	standard_name : D6Mit356

name	(CDS detail)
type	STS
link
xref	UniSTS:224928
definition

clone name	MSMg01-117B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127L12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-109G19.b	B6Ng01-109G19.g
ACC	DH916338	DH916339
length	1,088	1,044
definition	DH916338\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G19, 5' end.	DH916339\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G19, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagctcttagccccattttttaatggggttatttgatt ttctggagcccaccttcttgagttctttatatatattggatattagtttc ctatctgatttaggataggtacagatcctttcccaatctgttggtgctct ttttgtcttgttgacagtgtcttttgccttgcagaatctttccaactcta tgaggtctcatttattggttctcaatcttaccgcacaagccattgctgtt ctattcaggaatttttcccctgtacccatatcttcgaggctttctcctct ataagtttcattgtctctggttttatgtggagttccttaatccacttaga tttgaccttagtacaaggagatatgaatggatcaattcgaattcttctac atggtaactgccagttgtgccagcaccatttgtcgaaaatgctgtctttt tttccactggatgattttagctcccttgtcaaagatcaagtgtccatagg tgtgtgggttcatctctggggtttcaattctgttccattggtctacttgt ctgtcactataccagtaccatgcagtttatatcacaattgctctgtagta cagctttaggtcaggcatggtgattccaccagaggttcttttatccttga gaagagtttttgctatgctaggttttttgttattccagatgaatttgcag attgctctttctaattcgttgaagaattgagttggaattttgatggggat tgcattgaatctgtagaatgcttttggcaagatagccatttttacaatgt tgatcctgccaatccatgagcatgggagatctttccatcttctgagatct tctttaatttctttttcagagactttgaagttcttatcatacagatcttt catttccttagttagagtcatgccaatgtattttatattatttgtgacta ttgaagaagggtgttgtttccctattttcttcttcaggtgtttattcttg tgtcaaaaaaagccatgtgcctgtttgactaaattttatttccacctcct ccttaacgtgtattacaggcaagagtctctgggggaaa	gaattctcacaggaaaattcacagtgaattttatttatttatttatttat ttatttactgaaaaccaagaatttaaaaacccactttctatttctttttg gtttcttcattttcacaaacagtggggagctgggggaagcaaagaaagag cggacttcactcagtagcctatatataaaaacatgttggcacagtgcaga catattagaaggtcatagtgagggactttctataatacagaagaatagcg acagcctgatatgcatcggccagtgactgtggttttaaattcaactacaa cagagagtattttatttgtgtctctgtgtgaacatttttggctacaatcc agagggatttacttttcttgtttcgaagaaagcctgcttggctcatccct ttaatcagcagtggtattgtgtcattacactcccatgagaacttgtttga tggaagcttgtgatgtgctcagtatcaaataactcttcaattcaaattgt atcttttgaaatgtcagaatgatttaattttcaggaaaatcacaagggac acacttagagaaatagtatgtaagtgatatttttattattaaataatgaa tacaaattactgcttcaagcaaattactagcaataaattcattattgttt cacttatattttaattgacaataccaatgactacataattaaaagttgca ttaagcatctatcagtaaaaatgaataataaaacaatttatttccaagat aatgattgtcatatatcttatgtttcataataaaaaactatggttgatga cagaatttaattaagaaagtggaaactttgcttttccacaaacattatat acaaatgtttttactacttatttgacagtttataccagtactgccacata tacaatgctgcataagtaagaaacaagcaaaaagctgctatctataatgc ttggaaggctggacacaaggggggaagtgggccacactatgctactcact gtctgattcatttagagatgaaattcagctgattttaaaacaaa
quality values	Open. Hide. 61 41 47 38 61 61 61 61 61 47 61 61 33 22 47 61 61 61 61 61 61 61 61 15 12 18 12 20 24 28 61 55 30 50 43 30 61 59 61 61 61 61 61 59 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 55 44 30 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 55 59 59 55 44 44 61 61 61 61 61 61 61 59 59 61 59 55 55 59 61 61 52 61 59 61 59 59 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 52 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 50 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 55 61 61 61 61 61 61 61 61 61 61 35 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 53 61 61 61 61 61 53 61 61 61 61 50 50 61 61 61 53 53 61 61 61 61 53 61 61 61 53 61 52 61 61 61 61 61 61 50 61 61 53 61 50 61 47 52 61 61 61 61 61 61 52 47 61 53 61 53 33 47 45 53 61 61 61 52 61 39 38 61 45 47 35 47 47 43 40 61 24 30 33 61 47 52 61 61 52 50 53 43 47 43 53 47 42 32 61 47 31 57 40 45 57 57 57 57 53 38 40 43 45 53 50 50 45 50 57 28 57 57 57 57 57 53 38 57 53 50 53 42 42 34 37 57 45 53 53 50 40 57 53 53 53 42 42 39 18 23 47 30 34 36 53 57 50 50 34 28 45 45 53 33 38 45 45 53 41 47 20 57 32 40 39 45 53 38 53 57 40 50 52 52 34 57 57 53 39 42 25 42 57 57 53 39 28 52 50 39 35 53 50 37 24 53 28 47 47 52 42 37 14 53 50 34 50 28 38 57 41 36 53 41 24 38 47 37 50 35 33 40 37 30 39 32 57 57 57 37 35 40 25 50 30 43 14 32 27 38 33 24 37 36 53 27 43 29 39 45 30 53 34 36 42 40 23 40 30 30 53 42 33 50 17 11 9 23 16 34 35 14 29 22 40 31 28 33 27 30 30 40 17 23 14 22 38 35 27 35 57 16 17 42 31 57 12 19 37 57 57 53 53 17 12 10 53 15 34 18 13 57 15 22 36 42 26 35 40 32 27 37 34 34 24 17 20 23 23 27 29 25 20 14 10 34 17 18 15 5 14 28 29 44 18 52 17 6 23 31 32 10 39 36 27 32 19 36 31 18 25 17 28 8 10 5 12 18 27 39 37 14 8 11 33 10 22 24 53 25 14 10 24 33 28 27 11 11 16 26 15 8 8 17 14 7 45 19 10 9 7 9 10 9 47 30 23 29 22 12 39 17 30 35 25 38 22 33 12 8 11 12 18 20 12 10 26 16 28 22 17 13 6 26 25 18 5 8 13 12 5 12 6 12 25 27 14 6 34 8 23 17 19 10 9 24 8 8 23 19 11 11 19 13 8 5 9 6 16 12 29 47 51 6 5 9 5 11 22 18 8 8 7 11 14 14 17 7 7 7 12 7 8 7 7 10 17 23 8 23 12 10 8 5 7 7 4 7 4 4 14 17 29 15 19 14 12 15 16 18 9 23 14 14 9	Open. Hide. 50 34 29 40 61 61 14 43 12 19 7 6 10 7 10 11 15 22 26 35 43 55 47 61 61 61 61 47 35 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 52 49 43 22 28 29 49 41 55 61 55 61 55 52 55 55 61 61 55 55 52 61 55 55 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 47 55 55 61 61 55 55 55 49 55 55 61 61 61 52 61 52 61 55 61 49 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 47 49 61 61 61 55 61 61 61 47 52 55 61 55 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 55 61 61 61 55 61 61 61 55 61 55 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 50 61 61 50 61 61 61 55 55 61 61 61 61 55 61 61 55 55 55 55 55 50 61 61 61 55 61 61 55 55 61 61 61 50 55 61 55 61 61 61 61 61 61 53 61 53 61 53 53 50 61 61 61 50 53 61 61 50 61 50 61 61 61 61 61 53 61 61 61 53 47 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 39 61 61 61 61 53 52 61 39 61 61 43 39 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 40 61 61 61 53 61 61 61 61 61 61 61 61 37 50 61 61 50 61 61 61 61 61 61 61 39 61 61 61 52 53 61 61 61 53 61 61 61 50 61 61 61 50 61 61 61 53 61 61 42 61 42 61 61 61 61 61 32 47 42 61 31 61 53 61 45 61 61 53 61 53 61 61 39 57 57 53 53 50 57 57 57 57 45 57 57 53 53 52 57 53 57 53 45 52 47 53 43 42 32 57 57 50 38 57 53 53 57 57 53 50 52 57 47 57 53 23 57 53 43 57 57 38 53 57 57 53 53 53 53 42 53 53 47 42 57 50 57 38 47 57 47 42 57 53 40 57 38 38 47 47 57 57 57 53 35 45 57 53 57 47 47 34 53 43 53 30 53 47 57 47 31 43 53 52 50 52 57 53 52 18 29 10 17 21 23 30 53 52 42 38 33 57 39 53 41 47 53 53 50 45 53 50 57 57 53 47 53 52 53 45 45 45 23 57 46 30 39 57 38 41 28 52 38 39 52 16 41 34 52 45 40 52 45 53 50 50 41 43 22 34 52 52 53 53 42 26 27 30 50 42 52 40 45 32 38 50 45 57 32 32 51 52 37 52 43 45 50 52 57 9 57 53 34 25 42 38 52 47 50 42 37 57 57 34 28 38 38 57 50 37 37 15 53 53 31 50 46 16 52 47 46 37 37 39 28 52 18 40 32 40 42 52 37 57 53 34 22 29 53 52 40 31 43 52 25 53 40 40 28 44 53 40 37 44 42 36 30 48 28 57 57 53 41 31 33 36 37 45 29 28 48 37 57 57 40 47 28 37 37 57 37 34 41 57 48 39 41 32 37 30 39 19 23 29 35 41 33 28 41 44 14 32 25 27 30 29 28 32 40 28 25 36 26 33 26 46 30 29 22 32 14 39 43 34 51 51 46 51 33 28 28 30 29 30 30 22 22 29 22 13 29 28 33 18 10 14 28 34 51 30 19 24 24 30 25 30 13 39 51 29 28 21 28 17 10 5 11 12 23 36 30 28 23 32 37 43 22 29 25 14 29 11 46 21 24 23 33 13 21 28 20 29 16 16 10 41 29 15 29 14 36 41 46 29 13 25 5 13 20 14 8 7 7 21 18 20 29 23 21 9 11 41 21 11 12 21 25 27 16 19 30 18 28 22 25 9 12 6 16 8 24 10 5 11 13 11 19 11 14 9 21 25 21 15 18 18 8 25 11 7 23 12 28 51 22 9 4 4 4 7 20 34 51 38 26 15 26 34 22 13 7 7 9 29 9 7 4 4 6 7 7 18 16 9 28 8 14 10 29 17 9 10 13 13 5 4 5 17 12 9 30 17 37 34 32 19 5 4 6 13 8 31 7 11 5 7 8 8 7 5 6 12 21 24 17 14 11 5 9 8 14 5 12 4 4 5 10 14 5 6 3 1 4 16 14 12 7 8 13 7 4 5 15 29 16 7 13 17 12 5 17 8 11 4 5 20 27 23 12 32 25 24 8 12 27 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_61471899_61472949
seq2: B6Ng01-109G19.g_68_1111

seq1  GAATTCTCACAGGAAAATTCACAGTGAATTTTATTTATTTATTTATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAGGAAAATTCACAGTGAATTTTATTTATTTATTTATTTAT  50

seq1  TTATTTACTGAAAACCAAGAATTTAAAAACCCACTTTCTATTTCTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACTGAAAACCAAGAATTTAAAAACCCACTTTCTATTTCTTTTTG  100

seq1  GTTTCTTCATTTTCACAAACAGTGGGGAGCTGGGGGAAGCAAAGAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCATTTTCACAAACAGTGGGGAGCTGGGGGAAGCAAAGAAAGAG  150

seq1  CGGACTTCACTCAGTAGCCTATATATAAAAACATGTTGGCACAGTGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTTCACTCAGTAGCCTATATATAAAAACATGTTGGCACAGTGCAGA  200

seq1  CATATTAGAAGGTCATAGTGAGGGACTTTCTATAATACAGAAGAATAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAGAAGGTCATAGTGAGGGACTTTCTATAATACAGAAGAATAGCG  250

seq1  ACAGCCTGATATGCATCGGCCAGTGACTGTGGTTTTAAATTCAACTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGATATGCATCGGCCAGTGACTGTGGTTTTAAATTCAACTACAA  300

seq1  CAGAGAGTATTTTATTTGTGTCTCTGTGTGAACATTTTTGGCTACAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTATTTTATTTGTGTCTCTGTGTGAACATTTTTGGCTACAATCC  350

seq1  AGAGGGATTTACTTTTCTTGTTTCGAAGAAAGCCTGCTTGGCTCATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGATTTACTTTTCTTGTTTCGAAGAAAGCCTGCTTGGCTCATCCCT  400

seq1  TTAATCAGCAGTGGTATTGTGTCATTACACTCCCATGAGAACTTGTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGCAGTGGTATTGTGTCATTACACTCCCATGAGAACTTGTTTGA  450

seq1  TGGAAGCTTGTGATGTGCTCAGTATCAAATAACTCTTCAATTCAAATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTTGTGATGTGCTCAGTATCAAATAACTCTTCAATTCAAATTGT  500

seq1  ATCTTTTGAAATGTCAGAATGATTTAATTTTCAGGAAAATCACAAGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGAAATGTCAGAATGATTTAATTTTCAGGAAAATCACAAGGGAC  550

seq1  ACACTTAGAGAAATAGTATGTAAGTGATATTTTTATTATTAAATAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGAGAAATAGTATGTAAGTGATATTTTTATTATTAAATAATGAA  600

seq1  TACAAATTACTGCTTCAAGCAAATTACTAGCAATAAATTCATTATTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTACTGCTTCAAGCAAATTACTAGCAATAAATTCATTATTGTTT  650

seq1  CACTTATATTTTAATTGACAATACCAATGACTACATAATTAAAAGTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATATTTTAATTGACAATACCAATGACTACATAATTAAAAGTTGCA  700

seq1  TTAAGCATCTATCAGTAAAAATGAATAATAAAACAATTTATTTCCAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCATCTATCAGTAAAAATGAATAATAAAACAATTTATTTCCAAGAT  750

seq1  AATGATTGTCATATATCTTATGTTTCATAATAAAAAACTATGGTTGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGTCATATATCTTATGTTTCATAATAAAAAACTATGGTTGATGA  800

seq1  CAGAATTTAATTAAGAAAGTGGATAACTTTGCTTTTCCACAAACATTATA  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGAATTTAATTAAGAAAGTGGA-AACTTTGCTTTTCCACAAACATTATA  849

seq1  TACAAATGTTTTTACTAC-TATTTGACAGTTTATACCAGTACTG-CACAT  898
      |||||||||||||||||| ||||||||||||||||||||||||| |||||
seq2  TACAAATGTTTTTACTACTTATTTGACAGTTTATACCAGTACTGCCACAT  899

seq1  ATACAATGCTGCATAAAGTAGAGAAACACAGCAAAAAGCTGC-ATCCAAT  947
      |||||||||||||| ||||| ||||||| ||||||||||||| ||| |  
seq2  ATACAATGCTGCAT-AAGTA-AGAAACA-AGCAAAAAGCTGCTATCTATA  946

seq1  ATGC-TGGAAGGCTGGAGCAC-AGGGGGGCAGTTGGCCACAACTATGCTA  995
      |||| |||||||||||| ||| ||||||| ||| |||||| |||||||||
seq2  ATGCTTGGAAGGCTGGA-CACAAGGGGGGAAGTGGGCCAC-ACTATGCTA  994

seq1  CTCACCTGTCATGATCTATTTAGAGGATGAAATTCAGCTGATTTTTTAAA  1045
      |||| ||||| ||||  ||||||| ||||||||||||||||||||   ||
seq2  CTCA-CTGTC-TGATTCATTTAGA-GATGAAATTCAGCTGATTTT---AA  1038

seq1  AACAAA  1051
      ||||||
seq2  AACAAA  1044

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information