BAC Information

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BAC

Clone NameB6Ng01-109N04
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109N04.bB6Ng01-109N04.g
ACCDH916621DH916622
length1,0251,148
definitionDH916621|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N04, 5' end.DH916622|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtctaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcatgaatttttcccctgtgcccatatcttcaaggcttttccccac
tttcccctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcattgaagaattgagttggaatttt
gatagggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctttttttttttttttccattttttattaggtatttaactcacttacatt
tcccatgctataccaaaagtccccatatccacccacccccactcccctgc
ccacccactcccctttgggccctggtatcccctgtactggggcatataaa
gtttgcagtccaatgggcctctctt

gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaacagtcagaatggctaagatcaaaaatccaggtgagagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagatattacaaccattgtggaaatcagtctgctggttcctca
gaaaattggacatagtactacaggaggatcctgcaatacctctccagggc
atatatccagaagatgttccaaccgttaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaacgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacccaatcccaaa
agaagtgacacaatatgtactcgctgataagtggatattagcccagaaac
ttaggatacccaagatataagataaaatttgctaaactcatgaaactcaa
gaagaatgaagaccaaagtgtggatactttgccccttcttagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggaactgtgacg
aaaggatggaccatctagtgattgccatatccagggatccatcccataat
cagcttctaaatgctgacacctttgcatacactagcaagatttgctgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctatgattggtcacacggccccatgga
gagctagagaagtaccaaggagctaaaggtactgcacccttatagtagac
aacaatatgactacagtaccgagctcttgctctagctgcaatttcaaaga
tgctagttcagccatcactgaaatagaggcattgactgcacttttatggc
cagtcagggaacgcaggacaaatagggggaagagcgtaagctgtgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-109N04.b_49_576 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGGGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||| ||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCATGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTAGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528


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