BAC Information

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BAC

Clone NameB6Ng01-110K03
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,422 - 18,835,96836,391,390 - 36,392,520
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110K03.bB6Ng01-110K03.g
ACCDH917201DH917202
length1,0001,117
definitionDH917201|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K03, 5' end.DH917202|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,422 - 18,835,968)(36,391,390 - 36,392,520)
sequence
gaattgtttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctatatcagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctagttcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccgagatatttatatatttg
tggctattgagaggtgtgtttccctatttcttttctcagtctgtttattc

gaattctcggattttaaaaatgtgaagatctcacttgtgacaaagtgaat
gaactcagacaccatgtttagttggattatctagccacagaagacaaaaa
cttcatagctatacttactaaatataaaaatgaatttatagatggagaaa
gaagaaaatatggatatttatcatataaaataatatatcactatttaaga
ttacagagatttaaaatgttttgatcacagaaaattatgtccattggagg
tgataaatacactaattagtttgatccagttattccattctatataacta
tatcaaaactatatacatacacttattttccattggccaacaaaacaatt
aagtactttaaaatataacaagaaaacttcaaaagattttaatctgctta
tacaaagcagtgatatatatatatatatatactctgattactaatcttat
gccgtcaagactttatacatttcaaattgaaataaaatctaattaattac
aaagccccatgtataaatcattttgacaataaaagtcaccttgttttcta
ttatttttaaggtgagatagtacttacaaaaccaaatatagacttccatc
tgcaaattatattatttagtcaaagtacattttgtgtgctgcccaaatga
aagaaaaaatattcattttactcattagatatttctaattttctcttatt
atttaataattaaaaccagtttgttggcttacctattattgtatgataac
aatttcttaaataaaatgtattttcagttttgcataggttagatagcact
agctgttataatcaattccaactttctttaattttaaaatgtattacatt
tcttcattataggtttactgtgttaacacattctccccatatcctctctc
cttcctttatcactactctattagtcattttctctagaaattttgtttta
catcactgtaaatatatgatttttttgtgtctataaaaaatctggaacta
catgtaagagaaaaaaatattttgtcgctgaaactgctagtttaatattt
attttctactttatgccattttcaaaatagcaaaaatattcttcttctgg
tgaaacctttattttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835422_18835968
seq2: B6Ng01-110K03.b_42_589 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGT  150
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATC  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAA  300
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATG  349
      |||||||||| |||||||| || | |||||| ||||||||||||||||||
seq2  CAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  399
      |||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  449
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAA  500

seq1  TCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  547
      |||||||||||| |||| |||||||||||||||||||||||| |||||
seq2  TCAAATAACCCCCTTAAAAAATGGGGCTCAGAACTGAACAAACAATTC  548

seq1: chr12_36391390_36392520
seq2: B6Ng01-110K03.g_66_1182

seq1  GAATTCTCGGATTTTAAAAATGTGAAGATCTCACTTGTGACAAAGTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGATTTTAAAAATGTGAAGATCTCACTTGTGACAAAGTGAAT  50

seq1  GAACTCAGACACCATGTTTAGTTGGATTATCTAGCCACAGAAGACAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGACACCATGTTTAGTTGGATTATCTAGCCACAGAAGACAAAAA  100

seq1  CTTCATAGCTATACTTACTAAATATAAAAATGAATTTATAGATGGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGCTATACTTACTAAATATAAAAATGAATTTATAGATGGAGAAA  150

seq1  GAAGAAAATATGGATATTTATCATATAAAATAATATATCACTATTTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATGGATATTTATCATATAAAATAATATATCACTATTTAAGA  200

seq1  TTACAGAGATTTAAAATGTTTTGATCACAGAAAATTATGTCCATTGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGATTTAAAATGTTTTGATCACAGAAAATTATGTCCATTGGAGG  250

seq1  TGATAAATACACTAATTAGTTTGATCCAGTTATTCCATTCTATATAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATACACTAATTAGTTTGATCCAGTTATTCCATTCTATATAACTA  300

seq1  TATCAAAACTATATACATACACTTATTTTCCATTGGCCAACAAAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAACTATATACATACACTTATTTTCCATTGGCCAACAAAACAATT  350

seq1  AAGTACTTTAAAATATAACAAGAAAACTTCAAAAGATTTTAATCTGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTTAAAATATAACAAGAAAACTTCAAAAGATTTTAATCTGCTTA  400

seq1  TACAAAGCAGTGATATATATATATATATATACTCTGATTACTAATCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCAGTGATATATATATATATATATACTCTGATTACTAATCTTAT  450

seq1  GCCGTCAAGACTTTATACATTTCAAATTGAAATAAAATCTAATTAATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCAAGACTTTATACATTTCAAATTGAAATAAAATCTAATTAATTAC  500

seq1  AAAGCCCCATGTATAAATCATTTTGACAATAAAAGTCACCTTGTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCCATGTATAAATCATTTTGACAATAAAAGTCACCTTGTTTTCTA  550

seq1  TTATTTTTAAGGTGAGATAGTACTTACAAAACCAAATATAGACTTCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTAAGGTGAGATAGTACTTACAAAACCAAATATAGACTTCCATC  600

seq1  TGCAAATTATATTATTTAGTCAAAGTACATTTTGTGTGCTGCCCAAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTATATTATTTAGTCAAAGTACATTTTGTGTGCTGCCCAAATGA  650

seq1  AAGAAAAAATATTCATTTTACTCATTAGATATTTCTAATTTTCTCTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAATATTCATTTTACTCATTAGATATTTCTAATTTTCTCTTATT  700

seq1  ATTTAATAATTAAAACCAGTTTGTTGGCTTACCTATTATTGTATGATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAATTAAAACCAGTTTGTTGGCTTACCTATTATTGTATGATAAC  750

seq1  AATTTCTTAAATAAAATGTATTTTCAGTTTTGCATAGGTTAGATAGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTAAATAAAATGTATTTTCAGTTTTGCATAGGTTAGATAGCACT  800

seq1  AGCTGTTATAATCAATTCCAACTTTCTTTAATTTTAAAAATGTATTACAT  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCTGTTATAATCAATTCCAACTTTCTTTAATTTT-AAAATGTATTACAT  849

seq1  TTCTTCATTATAGGTTTACTGTGTTAACACATTCTCCCCCATATCCTCTC  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTTCATTATAGGTTTACTGTGTTAACACATTCT-CCCCATATCCTCTC  898

seq1  TCCTTCCTTTATCACTACTTCTATTAGTCATTTTTCTCTAGAAAATTTTT  950
      |||||||||||||||||| ||||||||||| |||||||||||||  ||||
seq2  TCCTTCCTTTATCACTAC-TCTATTAGTCA-TTTTCTCTAGAAA--TTTT  944

seq1  GTTTTTACATCACTGTAAATATATGATTTTTTTGTGTCTATAAAAAATCT  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTTTACATCACTGTAAATATATGATTTTTTTGTGTCTATAAAAAATCT  993

seq1  GGGACCTACATGTAAGAG-AAAACATATTTTGTCGCTGAAACTGGCTTAG  1049
       ||| ||||||||||||| |||| ||||||||||||||||||||   |||
seq2  -GGAACTACATGTAAGAGAAAAAAATATTTTGTCGCTGAAACTG--CTAG  1040

seq1  TTTAATATTTATTTCTAACTATATGCATCTTTCCAAAAATAGCAAAAATA  1099
      ||||||||||||||   ||| |||||   ||||  |||||||||||||||
seq2  TTTAATATTTATTTTCTACTTTATGCCATTTTC--AAAATAGCAAAAATA  1088

seq1  TCCTTCTTCGTGGTTGAAAACTTTTATTTTGT  1131
      | ||||||| ||||   |||| ||||||||||
seq2  TTCTTCTTC-TGGT--GAAACCTTTATTTTGT  1117