BAC Information

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BAC

Clone NameB6Ng01-111E10
Chromosome6 (Build37)
Map Location 9,510,296 - 9,510,872
singlet/doubletsinglet
Overlap genenone
Upstream geneGlcci1, Ica1, LOC100040238, Nxph1
Downstream geneLOC330264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111E10.bB6Ng01-111E10.g
ACCDH917661DH917662
length1,162571
definitionDH917661|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E10, 5' end.DH917662|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagaaaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacttcactccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgttggcaaggatgtggagaaaggggaacactcctccattgttggt
gggattgcaagcttgtgcaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatcccacaatacctctcctggg
catatatccagaagatgtcccaactggtaagaagaacacatgctccacta
tgttcatagcagccttgtttataataaccagaagctggaaagaacccaga
tgttcctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaa
ggaacttgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgccaaacgcatgaaattcaa
gaagaacgaagacaaaagtgtggacactttaccctttcttagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatgcagggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaagattttgctgaa
aggacccaggtatagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacatggccccc
atggaggagctagagaattacccaaggagctaaagggaactgcaacccta
tagtggacaacaatatgaactaccagtacccgggagctcttgtcttagct
gcaatatgtatcaaaagatggctagtcgcatcactgcaagagaggcccat
tgactgcaactttaatgcccagtacaggaacgcaggcaaaggggaatggg
tggggtaggggt
tctctctattaaacttcctcctttattcatattttatttttatggtttca
tttagtttccttttatgctttcttgtaattcattgagatactttagcagg
ataattttaaatactttgcaagtagttcttagatctccattacttttggg
tcattcagtagaggtttgattattgcttgttgttgctatggttcttgaag
attgctcatgttccttaatgcttattgttgctgcaagatgtagaatgttt
tattattatgttacaatgcctctgacatcatgaatgtgttaatgctatct
ctggagtggtggatcctacattacagaagtgagtgtgctataaatatgaa
tttacctccaaatttgttctcttttttatattaatacaacctctggcctc
tctgttttctaccatgtgctctcatacacaactgaaagtctcttttgata
ttctcaaaggacagtccttgattttagtcatctcaatctctatagaaaaa
aatcaattggttataaattactaaatccaaagcattctgttctagcagca
gtaaacaactatattacagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_9510296_9510872
seq2: B6Ng01-111E10.g_68_644

seq1  GAATTCTCTCTCTATTAAACTTCCTCCTTTATTCATATTTTATTTTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTATTAAACTTCCTCCTTTATTCATATTTTATTTTTATG  50

seq1  GTTTCATTTAGTTTCCTTTTATGCTTTCTTGTAATTCATTGAGATACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTTAGTTTCCTTTTATGCTTTCTTGTAATTCATTGAGATACTTT  100

seq1  AGCAGGATAATTTTAAATACTTTGCAAGTAGTTCTTAGATCTCCATTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATAATTTTAAATACTTTGCAAGTAGTTCTTAGATCTCCATTACT  150

seq1  TTTGGGTCATTCAGTAGAGGTTTGATTATTGCTTGTTGTTGCTATGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCATTCAGTAGAGGTTTGATTATTGCTTGTTGTTGCTATGGTTC  200

seq1  TTGAAGATTGCTCATGTTCCTTAATGCTTATTGTTGCTGCAAGATGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATTGCTCATGTTCCTTAATGCTTATTGTTGCTGCAAGATGTAGA  250

seq1  ATGTTTTATTATTATGTTACAATGCCTCTGACATCATGAATGTGTTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATTATTATGTTACAATGCCTCTGACATCATGAATGTGTTAATG  300

seq1  CTATCTCTGGAGTGGTGGATCCTACATTACAGAAGTGAGTGTGCTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGGAGTGGTGGATCCTACATTACAGAAGTGAGTGTGCTATAAA  350

seq1  TATGAATTTACCTCCAAATTTGTTCTCTTTTTTATATTAATACAACCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTACCTCCAAATTTGTTCTCTTTTTTATATTAATACAACCTCT  400

seq1  GGCCTCTCTGTTTTCTACCATGTGCTCTCATACACAACTGAAAGTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTGTTTTCTACCATGTGCTCTCATACACAACTGAAAGTCTCTT  450

seq1  TTGATATTCTCAAAGGACAGTCCTTGATTTTAGTCATCTCAATCTCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTCTCAAAGGACAGTCCTTGATTTTAGTCATCTCAATCTCTATA  500

seq1  GAAAAAAATCAATTGGTTATAAATTACTAAATCCAAAGCATTCTGTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATCAATTGGTTATAAATTACTAAATCCAAAGCATTCTGTTCTA  550

seq1  GCAGCAGTAAACAACTATATTACAGAT  577
      |||||||||||||||||||||||||||
seq2  GCAGCAGTAAACAACTATATTACAGAT  577