BAC Information

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BAC

Clone NameB6Ng01-111M16
Chromosome6 (Build37)
Map Location 11,288,807 - 11,289,361
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040285, LOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111M16.bB6Ng01-111M16.g
ACCDH918040DH918041
length580941
definitionDH918040|Mus musculus domesticus DNA, BAC clone: B6Ng01-111M16, 5' end.DH918041|Mus musculus domesticus DNA, BAC clone: B6Ng01-111M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atcagaatgactcgaattaagaaaagaaatatttaaaaacgctagttggg
atatggacaaaatgtctccctatacactgctggtgaggacataaattagt
ccagatgctattgaaaccaacatgaatattcagaaccctaaaactacctt
atgacccatgtataccacatgctgtgaatgtgaacacttagccccagcca
gtggccctgtttggaagattagggaatggagcattgctgaaagaagcatt
tcctttgttttaggctttgagttctttagtctgtactcacttgttctttt
ctctctgtgttcctgcacgtttgatataaagcaaggggtgaagtcacttt
cactgctgggatggactattatccactctggatgtaagccaaaataaggt
ctttttcttttaagttattttttatcacaaaacagaaatgaaactaatgt
aatacccaaaggactttaataaaagttttaacaagatatttgttgcttgt
ttgtttgtttgtttttgtttttgtatcactgttcagaccttatatattat
ggaataagactccctctccctccccctctc
gaattctcacctgaggaattctgaatggctaagaagaacctgaaaaaatg
ttcagcatccttaatcattggggatacgcaaatcaaaacaaccctgagat
tccacctcacaccaatcagaaagtctaagatcaaaaattcaggtgacagc
aaatgctggtaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgtaagcttgtacaaccactctggaaattagtctggcagttcctca
gaaaatttgacatagtactaccagaggatccatcaatatctctcctgggc
atatatcgagaagatgtcccaactgctaagaagaacacatgctccactat
gttcatagcagccttatttatcatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattcaaaacaatgaatttataaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
tcagcctccaaatgttgataccattgcataccccatcaagattttgctga
aaggaccctgatatagctgtctattgtgaggctatgctggggcctggcaa
agacagaagtggatgctcacagttagctattggatggaccacagggcccc
caatagaggagctagagaaagtactcaaatagctaaagggctttgtaacc
ctatagtggaacaacaatatgaactaaccagtacccctggagattgtgtc
tctagctgcatatgtatcagaggaagggcctagtcggccatcattgggaa
gagaggccccttggtctttcatactttatatgcctcagtatgtggcactc
cagggtcagaagtagagttggtgggtagggggagtgtgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11288807_11289361
seq2: B6Ng01-111M16.b_80_634 (reverse)

seq1  GAGAGGGGGAGGGAGAGGGAGTCTTATTCCATAATATATAAGGTCTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGGAGGGAGAGGGAGTCTTATTCCATAATATATAAGGTCTGAAC  50

seq1  AGTGATACAAAAACAAAAACAAACAAACAAACAAGCAACAAATATCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATACAAAAACAAAAACAAACAAACAAACAAGCAACAAATATCTTGT  100

seq1  TAAAACTTTTATTAAAGTCCTTTGGGTATTACATTAGTTTCATTTCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTTATTAAAGTCCTTTGGGTATTACATTAGTTTCATTTCTGTT  150

seq1  TTGTGATAAAAAATAACTTAAAAGAAAAAGACCTTATTTTGGCTTACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATAAAAAATAACTTAAAAGAAAAAGACCTTATTTTGGCTTACATC  200

seq1  CAGAGTGGATAATAGTCCATCCCAGCAGTGAAAGTGACTTCACCCCTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGATAATAGTCCATCCCAGCAGTGAAAGTGACTTCACCCCTTGC  250

seq1  TTTATATCAAACGTGCAGGAACACAGAGAGAAAAGAACAAGTGAGTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCAAACGTGCAGGAACACAGAGAGAAAAGAACAAGTGAGTACAG  300

seq1  ACTAAAGAACTCAAAGCCTAAAACAAAGGAAATGCTTCTTTCAGCAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGAACTCAAAGCCTAAAACAAAGGAAATGCTTCTTTCAGCAATGC  350

seq1  TCCATTCCCTAATCTTCCAAACAGGGCCACTGGCTGGGGCTAAGTGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCCTAATCTTCCAAACAGGGCCACTGGCTGGGGCTAAGTGTTCA  400

seq1  CATTCACAGCATGTGGTATACATGGGTCATAAGGTAGTTTTAGGGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAGCATGTGGTATACATGGGTCATAAGGTAGTTTTAGGGTTCTG  450

seq1  AATATTCATGTTGGTTTCAATAGCATCTGGACTAATTTATGTCCTCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATGTTGGTTTCAATAGCATCTGGACTAATTTATGTCCTCACCA  500

seq1  GCAGTGTATAGGGAGACATTTTGTCCATATCCCAACTAGCGTTTTTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTATAGGGAGACATTTTGTCCATATCCCAACTAGCGTTTTTAAAT  550

seq1  ATTTC  555
      |||||
seq2  ATTTC  555