BAC Information

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BAC

Clone NameB6Ng01-112F20
Chromosome6 (Build37)
Map Location 132,313,621 - 132,314,706
singlet/doubletsinglet
Overlap geneEG667929
Upstream geneCsda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5
Downstream geneEG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112F20.bB6Ng01-112F20.g
ACCDH918449DH918450
length7971,084
definitionDH918449|Mus musculus domesticus DNA, BAC clone: B6Ng01-112F20, 5' end.DH918450|Mus musculus domesticus DNA, BAC clone: B6Ng01-112F20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccttaaagagatagccccactggccatctatcccttgcttcag
ggaagatgagcggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtctttggcacatgtgttaggtgcagagtgtgcggcccgc
actttcgccatggtagcgtaggcttttgctgcagtggaggcggtacaatc
tcctcagattcggtttgccgctctaaaagaaattatgctgcgttatgccg
tggggtgtgaggctaagcactgcacagaggatagcttgctgttggcatcc
tgtggaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttc
ccccaggaaaaacgacacgggagctggccaagacttctctgggtgatgag
cctaagggatggttttgtgtagggcccctatgcttgcacactggggatca
gacctctaccttcacccatgaggcttgcttgcagcaattaagatctggcc
ataagttaattaacatcctggccttttgatgcacctgccgcaagcaaaac
acaatctccccaggagtggcttggcatgattgagaggtagtcagtgataa
gactccctgggcatgtcaccaacctaatacagggatcaaaccaatgctgt
ttgtctcccaaagacaggtaaggggcatggttgcgaggggctatctacag
acattctctctgccaaaaaagaaaaaaggggggaattgtggggagcgggt
gtggcggcagtcccaaaggcgccagggactgcagctaagaaatatga
gaattctttctttttcattttttattagaacttttcttcattaacatttc
acatgttatcctgaaaaacccctatactctccccaatgccctacttccct
acccacacacactcccatttcttgatcctggtgttcccctctactggggc
atacaaagtttcaatgccaaaagacttgtcttctgaatgatggccaagta
ggcaatctgagtagctatgaagcccctggcaaatactaaagtgcatgcac
acagtcacctattggctggaacacagggccccaggggatgagctagagaa
agtaccaaggagctgaagtagtctggaacccaataggtggaacaacaata
tgaactaactagcaatcccagagaccatgtctctagaactgaattcttga
tagcctcagtcctactgcatcctgctaggctaaagtcccaaagaagagtc
agggatgcatggcatgctcctgtcacaagtgtgttctacagtaaggaagt
gaaagatgcctttgttctaccatccttataaagactatggccttcctttc
tccagcacaaccttggaagcaatcttccaagatgctggtaatcctgctca
cagcggctttgctggtcctgagctcagctcagagagaagatgaaggtatg
aagtaggggagagagtggtacagtgatatttgactggtgtaacacacttc
aggactgggagaaataaaaggagatggaaaaggaacagaggcaaagaatt
atgagaacaaatagaagaacatttgttataatttttacttctagagctta
aactaaacttatggtatgaattacaaatattctttgcaacaaaacaacct
gagtaaatttataaaaagacttttttttagtagaagatgcaagaaagtat
gttgtagtttacagagggtaacttatttttaatggtgttatgaaaaccaa
tatttgattgtgcttgccttgtgtatagagacgagaaagaaggaagtatt
taaaaacatatttagatggttttaaggaaaaaaaaaaccaaatgttacaa
attttaaactgttaccacttgactataaatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132313621_132314706
seq2: B6Ng01-112F20.g_68_1151 (reverse)

seq1  TGATATTTATAGTTCATGTTGT-ACAGTTTAAAATTTGTTAACATTTGGT  49
      |||||||||||| ||| || || ||||||||||||||| |||||||||||
seq2  TGATATTTATAG-TCAAGTGGTAACAGTTTAAAATTTG-TAACATTTGGT  48

seq1  TTTTTTTTTTCTTAAAACCATTCCTAATATGTTTTT-AATACTTTCCTCT  98
      ||||||||| |||||||||| ||  ||||||||||| ||||||| | |||
seq2  TTTTTTTTTCCTTAAAACCA-TCTAAATATGTTTTTAAATACTTCCTTCT  97

seq1  TTCTCTGTCCTCTATACACAAGGCAAGCACAATCAATTATTGGTTTTTCA  148
      ||||| || ||||||||||||||||||||||||||| |||||| ||||||
seq2  TTCTC-GT-CTCTATACACAAGGCAAGCACAATCAAATATTGG-TTTTCA  144

seq1  TAACACCATTAAAAATAAGTTACCCTCTGTAAACTACAACATACTTTCTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCATTAAAAATAAGTTACCCTCTGTAAACTACAACATACTTTCTT  194

seq1  GCATCTTCTACTACAAAAAAGTCTTTTTATAAATTTACTCAGGTTGTTTT  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCTACTAAAAAAAAGTCTTTTTATAAATTTACTCAGGTTGTTTT  244

seq1  GTTGC-AAGAATATTTGTAATTCATACCATAAGTTTAGTTTAAGCTCTAG  297
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAAGAATATTTGTAATTCATACCATAAGTTTAGTTTAAGCTCTAG  294

seq1  AAGT-AAAATTATAACAAATGTTCTTCTATTTGTTCTCATAATTCTTTGC  346
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAATTATAACAAATGTTCTTCTATTTGTTCTCATAATTCTTTGC  344

seq1  CTCTGTTCCTTTTCCATCTCCTTTTATTTCTCCCAGTCCTGAAGTGTGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCCTTTTCCATCTCCTTTTATTTCTCCCAGTCCTGAAGTGTGTT  394

seq1  ACACCAGTCAAATATCACTGTACCACTCTCTCCCCTACTTCATACCTTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGTCAAATATCACTGTACCACTCTCTCCCCTACTTCATACCTTCA  444

seq1  TCTTCTCTCTGAGCTGAGCTCAGGACCAGCAAAGCCGCTGTGAGCAGGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTCTGAGCTGAGCTCAGGACCAGCAAAGCCGCTGTGAGCAGGAT  494

seq1  TACCAGCATCTTGGAAGATTGCTTCCAAGGTTGTGCTGGAGAAAGGAAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCATCTTGGAAGATTGCTTCCAAGGTTGTGCTGGAGAAAGGAAGG  544

seq1  CCATAGTCTTTATAAGGATGGTAGAACAAAGGCATCTTTCACTTCCTTAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTCTTTATAAGGATGGTAGAACAAAGGCATCTTTCACTTCCTTAC  594

seq1  TGTAGAACACACTTGTGACAGGAGCATGCCATGCATCCCTGACTCTTCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACACACTTGTGACAGGAGCATGCCATGCATCCCTGACTCTTCTT  644

seq1  TGGGACTTTAGCCTAGCAGGATGCAGTAGGACTGAGGCTATCAAGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTTAGCCTAGCAGGATGCAGTAGGACTGAGGCTATCAAGAATTC  694

seq1  AGTTCTAGAGACATGGTCTCTGGGATTGCTAGTTAGTTCATATTGTTGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGAGACATGGTCTCTGGGATTGCTAGTTAGTTCATATTGTTGTT  744

seq1  CCACCTATTGGGTTCCAGACTACTTCAGCTCCTTGGTACTTTCTCTAGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTATTGGGTTCCAGACTACTTCAGCTCCTTGGTACTTTCTCTAGCT  794

seq1  CATCCCCTGGGGCCCTGTGTTCCAGCCAATAGGTGACTGTGTGCATGCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTGGGGCCCTGTGTTCCAGCCAATAGGTGACTGTGTGCATGCAC  844

seq1  TTTAGTATTTGCCAGGGGCTTCATAGCTACTCAGATTGCCTACTTGGCCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTTGCCAGGGGCTTCATAGCTACTCAGATTGCCTACTTGGCCA  894

seq1  TCATTCAGAAGACAAGTCTTTTGGCATTGAAACTTTGTATGCCCCAGTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAGAAGACAAGTCTTTTGGCATTGAAACTTTGTATGCCCCAGTAG  944

seq1  AGGGGAACACCAGGATCAAGAAATGGGAGTGTGTGTGGGTAGGGAAGTAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAACACCAGGATCAAGAAATGGGAGTGTGTGTGGGTAGGGAAGTAG  994

seq1  GGCATTGGGGAGAGTATAGGGGTTTTTCAGGATAACATGTGAAATGTTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGGGGAGAGTATAGGGGTTTTTCAGGATAACATGTGAAATGTTAA  1044

seq1  TGAAGAAAAGTTCTAATAAAAAATGAAAAAGAAAGAATTC  1086
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAGTTCTAATAAAAAATGAAAAAGAAAGAATTC  1084