BAC Information

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BAC

Clone NameB6Ng01-112H10
Chromosome6 (Build37)
Map Location 133,227,342 - 133,228,485
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631126, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
Downstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112H10.bB6Ng01-112H10.g
ACCDH918522DH918523
length1,1291,101
definitionDH918522|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H10, 5' end.DH918523|Mus musculus domesticus DNA, BAC clone: B6Ng01-112H10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggcattgactctctagtggtatggctcttaagatggatcag
tcattagttggccagtccagtaagttctttgttactcttatgccagcata
tcttgcagaaaggaaaaaaaaattagtcaaagtttttgtgactacgttgg
tgtcctagtccatccactagaggcttagacttgttattagaaaattgcca
gttcaagttctcttcccaatgttattagcagtcttcactaagacttctat
aagaccactcttatagattatagggagtttccactgtaccagtatactaa
gtcacccttgaaaatctcccaattcctgtctgttcttccaagattatctc
cctttattcatttccttgaaccctcttgttcccatccctatatgccctca
gtggaccagagaacacaattttaattcccctttctaggttcatccttgca
accctcttgatctgtctttattacatagcctttctgaggtctgtgtgcac
attttattgggttccggatttttggattcagttctagatagtttaatagc
agggttttctcataattttctattttatatgttgaatctgtattcttttt
agttctctggattattaaccaagggacattgttggagataaggttaatag
tagggctgtttcatatgttttatcttttgagtgacaattttgtgttactt
cttttctatatgaaagagagaaggaaacataaggctgctcattagtgtaa
aacatacatggtaattatctaaaaagttaatttgtcttttatctggtaat
tttatgtgccccaggaaaggaagctgaatgctgaatatacaggggctaaa
acatgatattgtcctagccaatccttatctttttgctaaataacttgcat
tgagtttctgatagcattctatgctgtccttcataaatatctgcactaaa
tactctccgttaccttttagaagtagtacagtttactctcatatatgtct
ttatttgtcaatgcagagctctgtatgcggggtcagaggacattgccata
tgcctaaatttctcctctcaatgtggttccctaggaatggagcttagcct
tatggggcttcatcattcatttggagaac
gaattcatcgtttttaatagcagagtagaaattcattgtgtaaggaagga
ccctccattgactgcgccatctggggatccatcccataaacaaccaccaa
acccagtcactattgtatatgtcaacaaaattttgctgacaggatcctga
tatagctatctcttgtgaggctatgctagtgcctggcaaatacagaagtg
gatgttcacagtcatctattggatggaacacagggccctcagtgaagaag
ctagagaaagtactcaaagagttgaggggatctgtaaccctataggagga
acaacagtatgaactaaccagtacctcctcagagctgagtctctaattgc
atatttagcaggggatggcctagttggccatcaatgggaggagaggcccc
tggtcttgtgaaggccatatgcatcattacagggaaatgccaggaccaga
aagcaggagtgggtggctcgaggagcagggcaggggaggatatatggggg
ctttagggatagcatttgaaatgtaaatgaagaaaatatcgaataagaat
aataaaaaataaattgtcaaaaaataatagaagagaaagaaataagtcca
ttgtgtagatgtaccacattttctgtatccattcctctgttgagggacat
caaggttctttccagctcctggctattataaataaggctgcatgaacata
ttggagaatgtgtccttattacatgttggagcatattctgggtgtatgcc
caggagtggtattgctgagtgcttagatattactatgtccagttgtctgt
ggaaccagcaaactgatttccagagtgtttgttctagcttgaatcacacc
agcaatggaagagtgagtgttactcttttctctacattctcgccagcatc
tggtgtcatctgagtattttattgtagccattctgactggtgtgaggagg
aatctcaggttggtttgatttgcatttttcctgatgtcttaaagatattg
aaacatttgcttaggtgcatctcggccattactgttcctcagtgaaattt
ctttggatgtgcccgccactctatattctaaaatgtcctgttgttctctt
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133227342_133228485
seq2: B6Ng01-112H10.b_43_1171

seq1  GAATTCTCAGGCATTGACTCTCTAGTGGTATGGCTCTTAAGATGGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGCATTGACTCTCTAGTGGTATGGCTCTTAAGATGGATCAG  50

seq1  TCATTAGTTGGCCAGTCCAGTAAGTTCTTTGTTACTCTTATGCCAGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTTGGCCAGTCCAGTAAGTTCTTTGTTACTCTTATGCCAGCATA  100

seq1  TCTTGCAGAAAGGAAAAAAAAATTAGTCAAAGTTTTTGTGACTACGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAGAAAGGAAAAAAAAATTAGTCAAAGTTTTTGTGACTACGTTGG  150

seq1  TGTCCTAGTCCATCCACTAGAGGCTTAGACTTGTTATTAGAAAATTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGTCCATCCACTAGAGGCTTAGACTTGTTATTAGAAAATTGCCA  200

seq1  GTTCAAGTTCTCTTCCCAATGTTATTAGCAGTCTTCACTAAGACTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGTTCTCTTCCCAATGTTATTAGCAGTCTTCACTAAGACTTCTAT  250

seq1  AAGACCACTCTTATAGATTATAGGGAGTTTCCACTGTACCAGTATACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACTCTTATAGATTATAGGGAGTTTCCACTGTACCAGTATACTAA  300

seq1  GTCACCCTTGAAAATCTCCCAATTCCTGTCTGTTCTTCCAAGATTATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCTTGAAAATCTCCCAATTCCTGTCTGTTCTTCCAAGATTATCTC  350

seq1  CCTTTATTCATTTCCTTGAACCCTCTTGTTCCCATCCCTATATGCCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTCATTTCCTTGAACCCTCTTGTTCCCATCCCTATATGCCCTCA  400

seq1  GTGGACCAGAGAACACAATTTTAATTCCCCTTTCTAGGTTCATCCTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCAGAGAACACAATTTTAATTCCCCTTTCTAGGTTCATCCTTGCA  450

seq1  ACCCTCTTGATCTGTCTTTATTACATAGCCTTTCTGAGGTCTGTGTGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTTGATCTGTCTTTATTACATAGCCTTTCTGAGGTCTGTGTGCAC  500

seq1  ATTTTATTGGGTTCCGGATTTTTGGATTCAGTTCTAGATAGTTTAATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGGGTTCCGGATTTTTGGATTCAGTTCTAGATAGTTTAATAGC  550

seq1  AGGGTTTTCTCATAATTTTCTATTTTATATGTTGAATCTGTATTCTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTCTCATAATTTTCTATTTTATATGTTGAATCTGTATTCTTTTT  600

seq1  AGTTCTCTGGATTATTAACCAAGGGACATTGTTGGAGATAAGGTTAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTGGATTATTAACCAAGGGACATTGTTGGAGATAAGGTTAATAG  650

seq1  TAGGGCTGTTTCATATGTTTTATCTTTTGAGTGACAATTTTGTGTTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGTTTCATATGTTTTATCTTTTGAGTGACAATTTTGTGTTACTT  700

seq1  CTTTTCTATATGAAAGAGAGAAGGAAACATAAGGCTGCTCATTAGTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATATGAAAGAGAGAAGGAAACATAAGGCTGCTCATTAGTGTAA  750

seq1  AACATACATGGTAATTATCTAAAAAGTTAATTTGTCTTTTATCTGGTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACATGGTAATTATCTAAAAAGTTAATTTGTCTTTTATCTGGTAAT  800

seq1  TTTATGTGCCCCAGGAAAGGAAGCTGAATGCTGAATATACAGGGGCTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGCCCCAGGAAAGGAAGCTGAATGCTGAATATACAGGGGCTAAA  850

seq1  ACATGATATTGTCCTAGCCAATCCTTATCTTTTTGCTAAATAACTTGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACATGATATTGTCCTAGCCAATCCTTATCTTTTTGCTAAATAACTTGCA-  899

seq1  TTGAGTTTCTGATAGCATTCTATGCTGTCCTTCATAAATATTCTGCACTA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAGTTTCTGATAGCATTCTATGCTGTCCTTCATAAATA-TCTGCACTA  948

seq1  AATACTCTCCGTTACCTTTTAGAAGTAGTACAAGTTTACTCTCAATATAT  1000
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  AATACTCTCCGTTACCTTTTAGAAGTAGTAC-AGTTTACTCTC-ATATAT  996

seq1  GTCTTTATTTGTTCAAATGCCAGAGCACCTGTATGCGGGGTCAGAGGACA  1050
      ||||||||||||   |||| ||||||  ||||||||||||||||||||| 
seq2  GTCTTTATTTGT--CAATG-CAGAGC-TCTGTATGCGGGGTCAGAGGAC-  1041

seq1  ATTGCCATATG-CTAATTTTCTCCTTCTACAATGT-GTTCCCTAGGGATT  1098
      ||||||||||| |||| ||||||| ||| |||||| |||||||||| || 
seq2  ATTGCCATATGCCTAAATTTCTCC-TCT-CAATGTGGTTCCCTAGGAATG  1089

seq1  GAAGGCTTAGCCCTTATGGGGCTTCATTCCATTCATTTGGAAGAAC  1144
      ||  |||||| ||||||||||||||||  ||||||||||| |||||
seq2  GA--GCTTAG-CCTTATGGGGCTTCAT--CATTCATTTGG-AGAAC  1129