BAC Information

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BAC

Clone NameB6Ng01-113M13
Chromosome6 (Build37)
Map Location 18,811,273 - 18,812,344
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8
Downstream geneAnkrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113M13.bB6Ng01-113M13.g
ACCDH919488DH919489
length9791,079
definitionDH919488|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M13, 5' end.DH919489|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtctagctccataccccatttttaaattgggctattggggt
tgttggtgattaaattattgagctctttatatattttggatattatccct
ctgtcagatgtagggttgatgaagattttttcccaatatataggcagcca
ttttgtcctattggcagtgtcctttgacttacagaagctttttcagtttc
atgaggtcccatttatcaattattgatcttagagccggagttattgttgt
tcttttcggcaagttgtttcctatagcaataaattcaaagttattcccca
ctctctcttctatttgagtgtatccattttatgttgaggtctttgataca
cttggacttgagttttatgcaggtaacaaatatggatcaatttgcttcgt
ctacattcagacatccagttataccaggaccatttgtggaagaagctttc
ttttttccattgtatagttttggcttctttgtcaaaaataaagtgcccat
gggtgtgtaggtttagttctcagtcagtgattcaattccactgatcaacc
tgtttgtttctataccaatatcatgcagattttattactattgttctgta
gtgcagcttgtaattaggaatagtgctacctctaagacttctgttattgt
acagattattttagcctttgcccttgcagctttgaatattctttgttctg
tacatttagtattttgattattatgttatgggaggattttctttcctgat
ctaatctattttactgttctgtaagcttattgtacatttatagccatctc
tttctttaggttagggaaattttcttctatgattttcttgaagatattgt
ctggggcttttgagataggaatcttctatattcttaaattttgtcttatt
atagtttctccaacttttctgtatgttttgtgttagaacttttgattagg
attttctttgtgtgagaattaaagtttct

gaattctttaacggcagggcatgcccgggtttgttcttctttgttctcag
ccccaggcagcctcttggctcacaaacaaccagcaatttctgagtacttt
atatgacttacaggtcttaaactttcatctttctttcacaaccagaggca
gatggttttacaaaactttggcaggagttaaactgtttgctgatgtatct
tcagacatgacagtgaaaaagtataatgtaaaaacaaaattctaggcctt
taggcccaggcttgagaatgtgacctttgtgactcaatgctccaaagcat
gctaatcataaaacaggaacattcctccaccctcctgcttcctgggttca
gggagtgttctttgaaagaaagtcaccctgacccaccctgaccattgctg
gaacctgctatgcaatagtgctattgttagaggctcttagaaaattgact
tgactttccacgtcctcagtgactcttaactggtatttttggtattttcc
aacaatgccccccctccttgagttgtggtttcttcctttaaataccccca
tacccagctacttgggtctccatggtcctctacccctgcctggtgtataa
ctataggcacgagagtgctctttgaaataaaagtcttcttgcagtttgca
tcaagatcatttctcatgagtgatttgcggtgtcgcctctcctcagtcag
aatgtgtgtgtgttgggggggtcctcatgttgtgggtctttcacagaagc
tggaagcacagatttaaaaatatgtatgtaaacctagagaatatggatta
cattttggaatcatgggtctatcctctgaagcttgtgaaagaagggttag
tgtttgcttgtagtaatgtgtttaggaacaagaggcactcgttgctagac
aacaagaaactgagctctatatagctaatgaagcttgagagctagtatct
atcaaacaaaagcttgtgtatttcttaactggaatctgaggtctatactt
tttagctgctcctcttgaaaaccctggaagatgggtaataatgtgaaaga
atactgtggaatgcaagcccttccctgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18811273_18812344
seq2: B6Ng01-113M13.g_70_1148

seq1  GAATTCTTTAACGGCAGGGCATGCCCGGGTTTGTTCTTCTTTGTTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAACGGCAGGGCATGCCCGGGTTTGTTCTTCTTTGTTCTCAG  50

seq1  CCCCAGGCAGCCTCTTGGCTCACAAACAACCAGCAATTTCTGAGTACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCAGCCTCTTGGCTCACAAACAACCAGCAATTTCTGAGTACTTT  100

seq1  ATATGACTTACAGGTCTTAAACTTTCATCTTTCTTTCACAACCAGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTTACAGGTCTTAAACTTTCATCTTTCTTTCACAACCAGAGGCA  150

seq1  GATGGTTTTACAAAACTTTGGCAGGAGTTAAACTGTTTGCTGATGTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTTTACAAAACTTTGGCAGGAGTTAAACTGTTTGCTGATGTATCT  200

seq1  TCAGACATGACAGTGAAAAAGTATAATGTAAAAACAAAATTCTAGGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATGACAGTGAAAAAGTATAATGTAAAAACAAAATTCTAGGCCTT  250

seq1  TAGGCCCAGGCTTGAGAATGTGACCTTTGTGACTCAATGCTCCAAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCAGGCTTGAGAATGTGACCTTTGTGACTCAATGCTCCAAAGCAT  300

seq1  GCTAATCATAAAACAGGAACATTCCTCCACCCTCCTGCTTCCTGGGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCATAAAACAGGAACATTCCTCCACCCTCCTGCTTCCTGGGTTCA  350

seq1  GGGAGTGTTCTTTGAAAGAAAGTCACCCTGACCCACCCTGACCATTGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGTTCTTTGAAAGAAAGTCACCCTGACCCACCCTGACCATTGCTG  400

seq1  GAACCTGCTATGCAATAGTGCTATTGTTAGAGGCTCTTAGAAAATTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGCTATGCAATAGTGCTATTGTTAGAGGCTCTTAGAAAATTGACT  450

seq1  TGACTTTCCACGTCCTCAGTGACTCTTAACTGGTATTTTTGGTATTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCCACGTCCTCAGTGACTCTTAACTGGTATTTTTGGTATTTTCC  500

seq1  AACAATGCCCCCCCTCCTTGAGTTGTGGTTTCTTCCTTTAAATACCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGCCCCCCCTCCTTGAGTTGTGGTTTCTTCCTTTAAATACCCCCA  550

seq1  TACCCAGCTACTTGGGTCTCCATGGTCCTCTACCCCTGCCTGGTGTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGCTACTTGGGTCTCCATGGTCCTCTACCCCTGCCTGGTGTATAA  600

seq1  CTATAGGCACGAGAGTGCTC-TTGAAATAAAAGTCTTCTTGCAGTTTGCA  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTATAGGCACGAGAGTGCTCTTTGAAATAAAAGTCTTCTTGCAGTTTGCA  650

seq1  TCAAGATCATTTCTCATGAGTGATTTGCGGTGTCGCCTCTCCTCAGTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCATTTCTCATGAGTGATTTGCGGTGTCGCCTCTCCTCAGTCAG  700

seq1  AATGTGTGTGTGTTGGGGGGGTCCTCATGTTGTGGGTCTTTCAACAGAAG  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATGTGTGTGTGTTGGGGGGGTCCTCATGTTGTGGGTCTTTC-ACAGAAG  749

seq1  CTGGAAGCACAGATTTAAAAATATGTATGTAAACCTAGAGAATATGGATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGCACAGATTTAAAAATATGTATGTAAACCTAGAGAATATGGATT  799

seq1  ACATTTTGGAATCATGGGTCTATCCTCTGAAGC-TGTGAAAGAAGGGTAA  848
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  ACATTTTGGAATCATGGGTCTATCCTCTGAAGCTTGTGAAAGAAGGGTTA  849

seq1  GTGTTTGCTTGTAGTAATGTGTTTAGGAACAAGAGGCACTCGTTGCTAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCTTGTAGTAATGTGTTTAGGAACAAGAGGCACTCGTTGCTAGA  899

seq1  CAACAAGAAACTGAGCTCTATATAGCT-ATGAAGC-TGAGAGCTAGTATC  946
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  CAACAAGAAACTGAGCTCTATATAGCTAATGAAGCTTGAGAGCTAGTATC  949

seq1  TTATCAAAACAAAAGCTTGTGTAATTTCTAACTGGAATCTGAGGTCTATA  996
       |||| ||||||||||||||||| ||  ||||||||||||||||||||||
seq2  -TATC-AAACAAAAGCTTGTGTATTTCTTAACTGGAATCTGAGGTCTATA  997

seq1  C-TTTTAGCTGCT-CTCCTGAAAA-CCTGGAAGATGGGAATTA--GGGGA  1041
      | ||||||||||| ||| |||||| ||||||||||||| | ||  | | |
seq2  CTTTTTAGCTGCTCCTCTTGAAAACCCTGGAAGATGGGTAATAATGTGAA  1047

seq1  AGGATACCAGTGAATGCAAGCCC-TCCCTGTT  1072
      || ||||    |||||||||||| ||||||||
seq2  AGAATACTGTGGAATGCAAGCCCTTCCCTGTT  1079


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