BAC Information

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BAC

Clone NameB6Ng01-113P24
Chromosome6 (Build37)
Map Location 145,481,042 - 145,481,650
singlet/doubletsinglet
Overlap genenone
Upstream gene4933425H06Rik, EG665149, Bcat1, Lrmp, Casc1, Lyrm5, Kras, LOC100039495, LOC100042866, LOC546917, 1700073E17Rik, Ifltd1
Downstream geneLOC100042879, Tuba3b, Rassf8, Bhlhb3, Sspn, Itpr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P24.bB6Ng01-113P24.g
ACCDH919638DH919639
length241611
definitionDH919638|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P24, 5' end.DH919639|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaggccatcctgggacatccaggtggccctaactcagaaaccaaatttgt
acagtgtggttctggtgttaaggtcctgtcccccaaattggttcttgatt
aatcaatataagatgccaggggtcaattgctgggtggaaggaaagaggtg
ggacttctgggtccccacaggcaagcgaagagatgcaggggaggaaaagg
gtatttgccatgcttccaggcgggggaggggagggagaaga
gaattctccatagccaccaatatcaaagggtgcgtgactgcgagggacat
tgccataaccgacagccaccttagagtgtggattcaggagatccagagga
gcgtgtctccatggtaacaacaggagtgtggctgtctgtttctgcagttt
gtcgtgctgtaagggtgccctggataagattgggtgcatgactccctgaa
aaagtgttttagggagttgccatctgtgagttgatcagtggtctaatctg
cgtccgaagccctctcatagctgctggcaagcacgtcatctagcagaaga
gccgctcgtagattcagctggcagtctcacaggggaagctgagactctgg
gaaacagcaagttgagaaagtatgagtgtacacttagatgttcagctttt
gaaagatcatcactccaaatagctttaagacaagttcagtattaatcaat
gaacaggtactttgaaggtatcctgccttgtttttgttggctcatttact
tttagacagagtttccagtcttccgagctggtcttgaactcagtatgtag
ccaaggctggcccaaaaactctcgagactcctggctttcactcctgaggc
tggagagacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_145481042_145481650
seq2: B6Ng01-113P24.g_67_677 (reverse)

seq1  CTGTCTCTCCAGCCTCAGGAGTGAAAG-CAGGAGTCTCGAGAG-TTTTGG  48
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  CTGTCTCTCCAGCCTCAGGAGTGAAAGCCAGGAGTCTCGAGAGTTTTTGG  50

seq1  GCCAGCCTTGGCTACATACTGAGTTCAAGACCAGCTCGGAAGACTGGAAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTTGGCTACATACTGAGTTCAAGACCAGCTCGGAAGACTGGAAA  100

seq1  CTCTGTCTAAAAGTAAATGAGCCAACAAAAACAAGGCAGGATACCTTCAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTAAAAGTAAATGAGCCAACAAAAACAAGGCAGGATACCTTCAA  150

seq1  AGTACCTGTTCATTGATTAATACTGAACTTGTCTTAAAGCTATTTGGAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTGTTCATTGATTAATACTGAACTTGTCTTAAAGCTATTTGGAGT  200

seq1  GATGATCTTTCAAAAGCTGAACATCTAAGTGTACACTCATACTTTCTCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTTTCAAAAGCTGAACATCTAAGTGTACACTCATACTTTCTCAA  250

seq1  CTTGCTGTTTCCCAGAGTCTCAGCTTCCCCTGTGAGACTGCCAGCTGAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTTTCCCAGAGTCTCAGCTTCCCCTGTGAGACTGCCAGCTGAAT  300

seq1  CTACGAGCGGCTCTTCTGCTAGATGACGTGCTTGCCAGCAGCTATGAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGAGCGGCTCTTCTGCTAGATGACGTGCTTGCCAGCAGCTATGAGAG  350

seq1  GGCTTCGGACGCAGATTAGACCACTGATCAACTCACAGATGGCAACTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCGGACGCAGATTAGACCACTGATCAACTCACAGATGGCAACTCCC  400

seq1  TAAAACACTTTTTCAGGGAGTCATGCACCCAATCTTATCCAGGGCACCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACTTTTTCAGGGAGTCATGCACCCAATCTTATCCAGGGCACCCT  450

seq1  TACAGCACGACAAACTGCAGAAACAGACAGCCACACTCCTGTTGTTACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCACGACAAACTGCAGAAACAGACAGCCACACTCCTGTTGTTACCA  500

seq1  TGGAGACACGCTCCTCTGGATCTCCTGAATCCACACTCTAAGGTGGCTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACACGCTCCTCTGGATCTCCTGAATCCACACTCTAAGGTGGCTGT  550

seq1  CGGTTATGGCAATGTCCCTCGCAGTCACGCACCCTTTGATATTGGTGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTATGGCAATGTCCCTCGCAGTCACGCACCCTTTGATATTGGTGGCT  600

seq1  ATGGAGAATTC  609
      |||||||||||
seq2  ATGGAGAATTC  611