BAC Information

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BAC

Clone NameB6Ng01-114C20
Chromosome6 (Build37)
Map Location 75,454,017 - 75,616,622
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114C20.bB6Ng01-114C20.g
ACCDH919764DH919765
length9141,002
definitionDH919764|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C20, 5' end.DH919765|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,615,710 - 75,616,622)(75,454,017 - 75,455,024)
sequence
gaattcatttgtgaaagtgtgctgttacacattgtcctcattgtacgaac
ttcttggagtctagttatataaattaagactagggagaagcataggaggt
cttagagataaaacagatagtgaccaataatcctgcattcttatctatat
aagggattggcaataagtttcatttggagagaaccttacacaggaaagaa
tgcaacctttcccagaattgccatgtatagacttcgcctgttggccttca
ggtcaaatatgatgatttgattaaagtttatgttacataacattaaagct
tggcttatattgaggtggtttaaagaaaggtattctttctcctggccaag
aaaaaggactctcctgtaggtagaaatctaacattgcatgctatcccaca
cctaagaggtaatccagttagatcaggcaatcacctagtcaacacatttt
aggaatatgaattagccttaaatcatgctaaagagatagaaggaacaatt
gccgtgttaatgaataattatagcttttccttcccgttaagcctatccag
ttacagttcctaaagagtctaagtctgaactcaaaaatgtgtaagttttc
ataattcttcatttctgcccctccttggtgaggagctacaattttcttat
ttgtttacttttggatattttgtacatgctgaagatacttcctgtttgtc
atgtggctgctagtgggactcagatgcctaacttaaaaaggtatgaattt
ctctattcctcttgtcctgattcatctgagcagctgttgacataaaagtt
tccctgtaattaaaaggtattgcaaaactttatatgccccagtacaggga
atgccagggccaagaagcgggagtgggtgggtagggaagcagggcggagg
aaggtattagggaa
gaattcagtattataattattacaattgcagttttattcttcttgtctat
ttctttgggactaagagaaaaatcaattcaaaaaaaaaaaaaatccaccc
tgaacgactttctgtagcaagtaggaatgtgctctttaagaaaataaaat
gcaaaatgaaagcttcattccaggtgaaaaataaccacttggtttttttt
ggtttttattctgtctctcaatgtgtttttcttaattggagtgacataga
atctcagtataaaatttttgacgccagcaccacatctcacatctattgat
tttctattctttacaaagttgtaacagctactacatttacattaataagg
cttatcttagattaaatattggatcatgtttcacccccaaatttgtatca
gtcaaaatagattgccgaggttaaaaagtcataaaaataaaaagcaagca
agcaatcctcccaagatagtttaaagcaattaggggggaaatgggaaatc
aaagaaaaaaaaaataactagggtgatggggaggcagatccatcaatgaa
gtgattaccatgtaaacacagggttctgggttctactatcaacacatact
ttaaaagccaggcttagtgaaatgtatttgtagttctaacactcaagtct
gaagactcctgagatgtagtgtatctgaatggtgagatctgggatcagaa
atagaactcttctgaagagacaaataagagggcgactgaaaaagacatct
gaaaatgctgtcttttttccactgggtggttttagctcccttgtcaaaga
tcaagtgaccataggtgtgtgggttcatctctggatcttcaattctgttc
cattggtctacttgtctgtcactataccaataccatgcagttttatcaca
attgctctgtagtacagctttaggtccggcatggtgattccaccagaggt
tcttttatccttgagagagttttgctatcctaggtttttgttatccagat
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75615710_75616622
seq2: B6Ng01-114C20.b_45_958 (reverse)

seq1  TTCCCTATACCCTTCCTCCGCCCTGCTTCCCTACCCACCCACTCCCGCTT  50
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAATACCTTCCTCCGCCCTGCTTCCCTACCCACCCACTCCCGCTT  50

seq1  CTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAG-TTTGCAATACC  99
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  CTTGGCCCTGGCATT-CCCTGTACTGGGGCATATAAAGTTTTGCAATACC  99

seq1  TTTTAATTACAGGGAAACTTTTATGTCAACAGCTGCTCAGATGAATCAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTACAGGGAAACTTTTATGTCAACAGCTGCTCAGATGAATCAGG  149

seq1  ACAAGAGGAATAGAGAAATTCATACCTTTTTAAGTTAGGCATCTGAGTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGAATAGAGAAATTCATACCTTTTTAAGTTAGGCATCTGAGTCC  199

seq1  CACTAGCAGCCACATGACAAACAGGAAGTATCTTCAGCATGTACAAAATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAGCCACATGACAAACAGGAAGTATCTTCAGCATGTACAAAATA  249

seq1  TCCAAAAGT-AACAAATAAGAAAATTGTAGCTCCTCACCAAGGAGGGGCA  298
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGTAAACAAATAAGAAAATTGTAGCTCCTCACCAAGGAGGGGCA  299

seq1  GAAATGAAGAATTATGAAAACTTACACATTTTTGAGTTCAGACTTAGACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAGAATTATGAAAACTTACACATTTTTGAGTTCAGACTTAGACT  349

seq1  CTTTAGGAACTGTAACTGGATAGGCTTAACGGGAAGGAAAAGCTATAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGAACTGTAACTGGATAGGCTTAACGGGAAGGAAAAGCTATAATT  399

seq1  ATTCATTAACACGGCAATTGTTCCTTCTATCTCTTTAGCATGATTTAAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAACACGGCAATTGTTCCTTCTATCTCTTTAGCATGATTTAAGG  449

seq1  CTAATTCATATTCCTAAAATGTGTTGACTAGGTGATTGCCTGATCTAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCATATTCCTAAAATGTGTTGACTAGGTGATTGCCTGATCTAACT  499

seq1  GGATTACCTCTTAGGTGTGGGATAGCATGCAATGTTAGATTTCTACCTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACCTCTTAGGTGTGGGATAGCATGCAATGTTAGATTTCTACCTAC  549

seq1  AGGAGAGTCCTTTTTCTTGGCCAGGAGAAAGAATACCTTTCTTTAAACCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTCCTTTTTCTTGGCCAGGAGAAAGAATACCTTTCTTTAAACCA  599

seq1  CCTCAATATAAGCCAAGCTTTAATGTTATGTAACATAAACTTTAATCAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATATAAGCCAAGCTTTAATGTTATGTAACATAAACTTTAATCAAA  649

seq1  TCATCATATTTGACCTGAAGGCCAACAGGCGAAGTCTATACATGGCAATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATATTTGACCTGAAGGCCAACAGGCGAAGTCTATACATGGCAATT  699

seq1  CTGGGAAAGGTTGCATTCTTTCCTGTGTAAGGTTCTCTCCAAATGAAACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAGGTTGCATTCTTTCCTGTGTAAGGTTCTCTCCAAATGAAACT  749

seq1  TATTGCCAATCCCTTATATAGATAAGAATGCAGGATTATTGGTCACTATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCAATCCCTTATATAGATAAGAATGCAGGATTATTGGTCACTATC  799

seq1  TGTTTTATCTCTAAGACCTCCTATGCTTCTCCCTAGTCTTAATTTATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATCTCTAAGACCTCCTATGCTTCTCCCTAGTCTTAATTTATATA  849

seq1  ACTAGACTCCAAGAAGTTCGTACAATGAGGACAATGTGTAACAGCACACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTCCAAGAAGTTCGTACAATGAGGACAATGTGTAACAGCACACT  899

seq1  TTCACAAATGAATTC  913
      |||||||||||||||
seq2  TTCACAAATGAATTC  914

seq1: chr6_75454017_75455024
seq2: B6Ng01-114C20.g_67_1068

seq1  GAATTCAGTATTATAATTATTACAATTGCAGTTTTATTCTTCTTGTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTATAATTATTACAATTGCAGTTTTATTCTTCTTGTCTAT  50

seq1  TTCTTTGGGACTAAGAGAAAAATCAATTCAAAAAAAAAAAAAAATCCACC  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTTTGGGACTAAGAGAAAAATCAATTC-AAAAAAAAAAAAAATCCACC  99

seq1  CTGAACGACTTTCTGTAGCAAGTAGGAATGTGCTCTTTAAGAAAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGACTTTCTGTAGCAAGTAGGAATGTGCTCTTTAAGAAAATAAAA  149

seq1  TGCAAAATGAAAGCTTCATTCCAGGTGAAAAATAACCACTTGGTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATGAAAGCTTCATTCCAGGTGAAAAATAACCACTTGGTTTTTTT  199

seq1  TGGTTTTTATTCTGTCTCTCAATGTGTTTTTCTTAATTGGAGTGACATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTATTCTGTCTCTCAATGTGTTTTTCTTAATTGGAGTGACATAG  249

seq1  AATCTCAGTATAAAATTTTTGACGCCAGCACCACATCTCACATCTATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGTATAAAATTTTTGACGCCAGCACCACATCTCACATCTATTGA  299

seq1  TTTTCTATTCTTTACAAAGTTGTAACAGCTACTACATTTACATTAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATTCTTTACAAAGTTGTAACAGCTACTACATTTACATTAATAAG  349

seq1  GCTTATCTTAGATTAAATATTGGATCATGTTTCACCCCCAAATTTGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCTTAGATTAAATATTGGATCATGTTTCACCCCCAAATTTGTATC  399

seq1  AGTCAAAATAGATTGCCGAGGTTAAAAAGTCATAAAAATAAAAAGCAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATAGATTGCCGAGGTTAAAAAGTCATAAAAATAAAAAGCAAGC  449

seq1  AAGCAATCCTCCCAAGATAGTTTAAAGCAATTAGGGGGGAAATGGGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCCTCCCAAGATAGTTTAAAGCAATTAGGGGGGAAATGGGAAAT  499

seq1  CAAAGAAAAAAAAAATAACTAGGGTGATGGGGAGGCAGATCCATCAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAAAAAAAATAACTAGGGTGATGGGGAGGCAGATCCATCAATGA  549

seq1  AGTGATTACCATGTAAACACAGGGTTCTGGGTTCTACTATCAACACATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTACCATGTAAACACAGGGTTCTGGGTTCTACTATCAACACATAC  599

seq1  TTTAAAAGCCAGGCTTAGTGAAATGTATTTGTAGTTCTAACACTCAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGCCAGGCTTAGTGAAATGTATTTGTAGTTCTAACACTCAAGTC  649

seq1  TGAAGACTCCTGAGATGTAGTGTATCTGAATGGTGAGATCTGGGATCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTCCTGAGATGTAGTGTATCTGAATGGTGAGATCTGGGATCAGA  699

seq1  AATAGAACTCTTCTGAAGAGACAAATAAGAGGGCGACTGAAAAAGACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACTCTTCTGAAGAGACAAATAAGAGGGCGACTGAAAAAGACATC  749

seq1  TGAAAATGCTGTCTTTTTTCCACTGGGTGGTTTTAGCTCCCTTGTCAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGCTGTCTTTTTTCCACTGGGTGGTTTTAGCTCCCTTGTCAAAG  799

seq1  ATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGATCTTCAATTCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGATCTTCAATTCTGTT  849

seq1  CCATTGGTCTACTTGTCTGTCACTATACCAATACCATGCAGTTTTTATCA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCATTGGTCTACTTGTCTGTCACTATACCAATACCATGCAG-TTTTATCA  898

seq1  CAATTGCTCTGTAGTACAGCTTTAGGTCCGGCATGGTGATTCCACCAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCTGTAGTACAGCTTTAGGTCCGGCATGGTGATTCCACCAGAG  948

seq1  GTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATT  1000
      ||||||||||||||||| |||| ||||||||||||||| ||||||||| |
seq2  GTTCTTTTATCCTTGAG-AGAG-TTTTGCTATCCTAGG-TTTTTGTTA-T  994

seq1  CCAGATGA  1008
      ||||||||
seq2  CCAGATGA  1002