BAC Information

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BAC

Clone NameB6Ng01-114K08
Chromosome6 (Build37)8 (Build37)
Map Location 18,835,442 - 18,835,96888,602,897 - 88,603,110
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K08.bB6Ng01-114K08.g
ACCDH920117DH920118
length989214
definitionDH920117|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K08, 5' end.DH920118|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(88,602,897 - 88,603,110)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaggtacttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatgtctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccaagatattttatatatt
gtgactattgagatggtgttgtttccctaatttctttct
acttctgaatggtaattatgtggcttttccctccctcggactgactgctg
ctcctttggaattactttactgttacatataacatcaggatgatcgtgat
ggggtgggggtggggcgatatagggttacctttgaagtctatattgtatg
tgtgggaagtaatattaagagaatcgctagcttcatggagtctaggctga
cctccttactcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-114K08.b_52_579 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGTGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||| | ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGTACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr8_88602897_88603110
seq2: B6Ng01-114K08.g_74_287 (reverse)

seq1  TCTGAGTAAGGAGGTCAGCCTTGGCTCCATGATGCTGGCGATTCTCTTCT  50
      | ||||||||||||||||||| | |||||||| ||| |||||||||||  
seq2  TTTGAGTAAGGAGGTCAGCCTAGACTCCATGAAGCTAGCGATTCTCTTAA  50

seq1  TCTTACTTCCCACACATACAATATAGACTTCAAAGGTAACCCTATATCGC  100
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTCCCACACATACAATATAGACTTCAAAGGTAACCCTATATCGC  100

seq1  CCCACCCCCACCCCATCACGATCATCCTGATGTTATATGTAACAGTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCACCCCATCACGATCATCCTGATGTTATATGTAACAGTAAAG  150

seq1  TAATTCCAAAGGAGCAGCAGTCAGTCCGAGGGAGGGAAAAGCCACATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAAAGGAGCAGCAGTCAGTCCGAGGGAGGGAAAAGCCACATAAT  200

seq1  TACCATTCAGAAGT  214
      ||||||||||||||
seq2  TACCATTCAGAAGT  214