BAC Information

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BAC

Clone NameB6Ng01-115D02
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,452 - 18,835,96844,628,619 - 44,629,724
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115D02.bB6Ng01-115D02.g
ACCDH920520DH920521
length1,0391,096
definitionDH920520|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D02, 5' end.DH920521|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(44,628,619 - 44,629,724)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatgacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaaagtttttatcat
acagatcttttcacttcctttgtttagagtcacgccgagatattttataa
ttattttgtggctatggagaacggtgttgttttccctaattttctttctc
agcctgtttattcttgtatagagaaggcccattgacttg
gaattctcttgtgcaagacatacaagcaataaaaaattaaatgctgcagt
ggatcaggtgatgagatgaaattaagaaaataaaaacaggggctggagag
atggttcagcagttaagagtactgactgctcttccaggggtcctgagttc
aattcccagccaccacatactggctcacaatcatttgtaatgagatctga
tgcccttttctggtgtgtctaaagacagcgacagcatactcacattcatg
aaataaaataaataaatctttttttaaaaaagaaaagaaaagataagaaa
attaaaacaggaaaagactactgagaaaagtaaagcaagttagaggtagg
ccatcctgagaaggagatgttaaagggaagactagagaggaaaaatggca
gttggggtaagcatccatgccaacatgtgaccagtgcacaatgcaagcag
aaaagtaccaaaaaagtctagatgattattttttctctatgttaaatgga
gccacgggaaaggtttgtgtagagaagtaatccaggacaagggacacaca
tatatttacaaacacacacacagacagacagagagaggtacatacacaca
caaaatatcaacacacccacttacacacaagcacatacacatacaaatat
gaacacatacacagagtttagcagtaagtgggtccattttaatattaaaa
tctaccaattagcaaacaaaaacctagttggtaaaaaaaaagtcacagaa
gtgttagatttcatcttgactgcttcttccattgtgtttgaatgcattca
cagggattgatcttatgacttttaagaaatgagtagagtcctagggtaag
ggtgttattttgggaattgtattagtcaggttctgtggatagaagaactt
atagaataatctctgtctctgtctctgtcactctctgtctctgtctctct
ctgtgtctgtctgtctgtttgtctgtctttctgatgtgtatatgggtgtg
tgggagagagagagagttgtctgtctgtctgtctctgactgaatatctag
agtacacatctgtatgcacctagactcagatcacttcagaaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-115D02.b_47_564 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr1_44628619_44629724
seq2: B6Ng01-115D02.g_68_1163 (reverse)

seq1  CCTCTCTTCTGAAGTGATTTCTGAGTCTTAGGTGCATACAGATGTGTACT  50
      |||| ||||||||||||  |||||||| ||||||||||||||||||||||
seq2  CCTC-CTTCTGAAGTGA--TCTGAGTC-TAGGTGCATACAGATGTGTACT  46

seq1  CTAGATATATCAGTTAGGAGACAGACAGACAGACAAACTCTCTCTCTCTC  100
      |||||||| ||||| | ||||||||||||||||| |||||||||||||||
seq2  CTAGATAT-TCAGTCA-GAGACAGACAGACAGAC-AACTCTCTCTCTCTC  93

seq1  ACACACACACATATACACATACAGAAAGACAGACAAACAGACAGACAGAC  150
       ||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CCACACACCCATATACACAT-CAGAAAGACAGACAAACAGACAGACAGAC  142

seq1  ACAGAGAGAGACAGAGACAGAGAGTGACAGAGACAGAGACAGAGATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACAGAGAGAGACAGAGACAGAGAGTGACAGAGACAGAGACAGAGA-TTAT  191

seq1  TCTATAAGTTCTTCTATCCACAGAACCCTGACTAATACAATTCCCAAAAT  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTATAAGTTCTTCTATCCACAGAA-CCTGACTAATACAATTCCCAAAAT  240

seq1  AACACCCTTACCCTAGGACTCTACTCATTTCTTAAAAGTCATAAGATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCTTACCCTAGGACTCTACTCATTTCTTAAAAGTCATAAGATCAA  290

seq1  TCCCTGTGAATGCATTCAAACACAATGGAAGAAGCAGTCAAGATGAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGAATGCATTCAAACACAATGGAAGAAGCAGTCAAGATGAAATC  340

seq1  TAACACTTCTGTGACTTTTTTTTTACCAACTAGGTTTTTGTTTGCTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTTCTGTGACTTTTTTTTTACCAACTAGGTTTTTGTTTGCTAATT  390

seq1  GGTAGATTTTAATATTAAAATGGACCCACTTACTGCTAAACTCTGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATTTTAATATTAAAATGGACCCACTTACTGCTAAACTCTGTGTAT  440

seq1  GTGTTCATATTTGTATGTGTATGTGCTTGTGTGTAAGTGGGTGTGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATATTTGTATGTGTATGTGCTTGTGTGTAAGTGGGTGTGTTGAT  490

seq1  ATTTTGTGTGTGTATGTACCTCTCTCTGTCTGTCTGTGTGTGTGTTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTGTGTATGTACCTCTCTCTGTCTGTCTGTGTGTGTGTTTGTA  540

seq1  AATATATGTGTGTCCCTTGTCCTGGATTACTTCTCTACACAAACCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGTGTGTCCCTTGTCCTGGATTACTTCTCTACACAAACCTTTCC  590

seq1  CGTGGCTCCATTTAACATAGAGAAAAAATAATCATCTAGACTTTTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCTCCATTTAACATAGAGAAAAAATAATCATCTAGACTTTTTTGGT  640

seq1  ACTTTTCTGCTTGCATTGTGCACTGGTCACATGTTGGCATGGATGCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCTGCTTGCATTGTGCACTGGTCACATGTTGGCATGGATGCTTAC  690

seq1  CCCAACTGCCATTTTTCCTCTCTAGTCTTCCCTTTAACATCTCCTTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGCCATTTTTCCTCTCTAGTCTTCCCTTTAACATCTCCTTCTCA  740

seq1  GGATGGCCTACCTCTAACTTGCTTTACTTTTCTCAGTAGTCTTTTCCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCCTACCTCTAACTTGCTTTACTTTTCTCAGTAGTCTTTTCCTGT  790

seq1  TTTAATTTTCTTATCTTTTCTTTTCTTTTTTAAAAAAAGATTTATTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTCTTATCTTTTCTTTTCTTTTTTAAAAAAAGATTTATTTATT  840

seq1  TTATTTCATGAATGTGAGTATGCTGTCGCTGTCTTTAGACACACCAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATGAATGTGAGTATGCTGTCGCTGTCTTTAGACACACCAGAAA  890

seq1  AGGGCATCAGATCTCATTACAAATGATTGTGAGCCAGTATGTGGTGGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCAGATCTCATTACAAATGATTGTGAGCCAGTATGTGGTGGCTG  940

seq1  GGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTACTCTTAACTGCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGAACTCAGGACCCCTGGAAGAGCAGTCAGTACTCTTAACTGCTG  990

seq1  AACCATCTCTCCAGCCCCTGTTTTTATTTTCTTAATTTCATCTCATCACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTCTCCAGCCCCTGTTTTTATTTTCTTAATTTCATCTCATCACC  1040

seq1  TGATCCACTGCAGCATTTAATTTTTTATTGCTTGTATGTCTTGCACAAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACTGCAGCATTTAATTTTTTATTGCTTGTATGTCTTGCACAAGA  1090

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1096