BAC Information

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BAC

Clone NameB6Ng01-115N19
Chromosome6 (Build37)
Map Location 134,076,567 - 134,217,765
singlet/doubletdoublet
Overlap geneEtv6
Upstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063
Downstream geneLOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115N19.bB6Ng01-115N19.g
ACCDH921018DH921019
length1,106201
definitionDH921018|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N19, 5' end.DH921019|Mus musculus domesticus DNA, BAC clone: B6Ng01-115N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,216,652 - 134,217,765)(134,076,567 - 134,076,767)
sequence
gaattccagggatacacagaaaaaccctgtctcaaaaaaaaaaatcccaa
aaataaataaataaataaaataaaatccctgctatcaaaaatcctaagga
atagcattaccctcatcttggaagatgctactgaccttatgtcgaggtgg
agaagagccacagatatgtcctcctgaaatacagccatgacagacggaaa
aaaggaaaaagtctaaatctgaggaatttcctgtctgcgcaaataccggc
tgtgcctgagactaaattccagcatcctccctcatgtgtgttctgtgttc
catgaggaccagcatagaagaaaaaggctaggacttggagtgtgtgtgtg
gggtggtgacaatcccacaagggcatgatgtcttgggacaacattggtga
cctgttcttgctcctaaactaccaggcctgtgtggtctctcatattttcc
taatgtgtagcactttcaggacaatcccaaactgcctgggccttgcaaat
cctgtggccaccctctgtcctatcttatgctcgatcctcccattgttctt
tctagaatacagcagcatttggtggggggagatgtctggccttcctcaga
tgggtgcccaaggggtctgactgtcacagagcagccgggtcactgtgtag
ttcaggtgctagtgaggctagctctgatgaaaagcctgtgaagtgcatag
caggcagagaagggggaaggagaaaggggcggggatgagcggcgagagag
ggagatggagacagaactcttcttttccattgtttgaaagtatctctctc
attttgttttcctttctcatctaagacctgacttggacaggacacaccag
atctatgtggcaggaaaaagaggaacctgattccttctgcaagttttctc
tttcctgaccagccaagctggccgtacttggtgagatttgcaacacacaa
aaaaatttaatatatatatataatagatatatttccataggaaacacatg
ttgatgtctccttgtatgaacatgatagtcaactgcatgttcttaaaaac
aaaccaaaaacgaaacccggaatcaccatgagacttccaacaggtgtagg
ggaagg
tgcctcctcagtcagtgatttcacgtcaaataccaatacttccctatttg
caataccaggacgggtttcttttcctcctcctcctcctcctcctccacct
cctcctcctcctcttcctcttctttctcctcctcctcctcttcctcctcc
tccttttattattacgtcctccatctcctcctccttctcctcctcattct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134216652_134217765
seq2: B6Ng01-115N19.b_48_1153 (reverse)

seq1  CCTTCCCCTACACCTGTT-GTAGTCTCATGGTG-TTTCTGGTTTCGTTTT  48
      |||||||||||||||||| | |||||||||||| || | |||||||||||
seq2  CCTTCCCCTACACCTGTTGGAAGTCTCATGGTGATTCCGGGTTTCGTTTT  50

seq1  TTGTTTTTGTTTTTTAAGAACATGCAGTTTGACTATTCATTGTTCATACA  98
      | ||||    ||||||||||||||||| ||||||| ||| ||||||||||
seq2  TGGTTT---GTTTTTAAGAACATGCAG-TTGACTA-TCA-TGTTCATACA  94

seq1  GGGAAGACATC-ACATGTTGTTTTCCTATGGAAATATATCTATTATATAT  147
       || ||||||| ||||||   |||||||||||||||||||||||||||||
seq2  AGG-AGACATCAACATGT--GTTTCCTATGGAAATATATCTATTATATAT  141

seq1  ATATTATTAATTTTTTTGTTGTTGTTGCAAATCTCACCAAGTACGGCCAG  197
      ||||  | |||||||||||   ||||||||||||||||||||||||||||
seq2  ATATATTAAATTTTTTTGT--GTGTTGCAAATCTCACCAAGTACGGCCAG  189

seq1  CTTGGCTGGTCAGGAAAGAGAAAACTTGCAGAAGGAATCAGGTTCCTCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGGTCAGGAAAGAGAAAACTTGCAGAAGGAATCAGGTTCCTCTT  239

seq1  TTTCCTGCCACATAGATCTGGTGTGTCCTGTCCAAGTCAGGTCTTAGATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCCACATAGATCTGGTGTGTCCTGTCCAAGTCAGGTCTTAGATG  289

seq1  AGAAAGGAAAACAAAATGAGAGAGATACTTTCAAACAATGGAAAAGAAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAAACAAAATGAGAGAGATACTTTCAAACAATGGAAAAGAAGA  339

seq1  GTTCTGTCTCCATCTCCCTCTCTCGCCGCTCATCCCCGCCCCTTTCTCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTCTCCATCTCCCTCTCTCGCCGCTCATCCCCGCCCCTTTCTCCT  389

seq1  TCCCCCTTCTCTGCCTGCTATGCACTTCACAGGCTTTTCATCAGAGCTAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTTCTCTGCCTGCTATGCACTTCACAGGCTTTTCATCAGAGCTAG  439

seq1  CCTCACTAGCACCTGAACTACACAGTGACCCGGCTGCTCTGTGACAGTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTAGCACCTGAACTACACAGTGACCCGGCTGCTCTGTGACAGTCA  489

seq1  GACCCCTTGGGCACCCATCTGAGGAAGGCCAGACATCTCCCCCCACCAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTTGGGCACCCATCTGAGGAAGGCCAGACATCTCCCCCCACCAAA  539

seq1  TGCTGCTGTATTCTAGAAAGAACAATGGGAGGATCGAGCATAAGATAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTATTCTAGAAAGAACAATGGGAGGATCGAGCATAAGATAGGA  589

seq1  CAGAGGGTGGCCACAGGATTTGCAAGGCCCAGGCAGTTTGGGATTGTCCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTGGCCACAGGATTTGCAAGGCCCAGGCAGTTTGGGATTGTCCT  639

seq1  GAAAGTGCTACACATTAGGAAAATATGAGAGACCACACAGGCCTGGTAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCTACACATTAGGAAAATATGAGAGACCACACAGGCCTGGTAGT  689

seq1  TTAGGAGCAAGAACAGGTCACCAATGTTGTCCCAAGACATCATGCCCTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGCAAGAACAGGTCACCAATGTTGTCCCAAGACATCATGCCCTTG  739

seq1  TGGGATTGTCACCACCCCACACACACACTCCAAGTCCTAGCCTTTTTCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGTCACCACCCCACACACACACTCCAAGTCCTAGCCTTTTTCTT  789

seq1  CTATGCTGGTCCTCATGGAACACAGAACACACATGAGGGAGGATGCTGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGGTCCTCATGGAACACAGAACACACATGAGGGAGGATGCTGGA  839

seq1  ATTTAGTCTCAGGCACAGCCGGTATTTGCGCAGACAGGAAATTCCTCAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTCTCAGGCACAGCCGGTATTTGCGCAGACAGGAAATTCCTCAGA  889

seq1  TTTAGACTTTTTCCTTTTTTCCGTCTGTCATGGCTGTATTTCAGGAGGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTTTTTCCTTTTTTCCGTCTGTCATGGCTGTATTTCAGGAGGAC  939

seq1  ATATCTGTGGCTCTTCTCCACCTCGACATAAGGTCAGTAGCATCTTCCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTGGCTCTTCTCCACCTCGACATAAGGTCAGTAGCATCTTCCAA  989

seq1  GATGAGGGTAATGCTATTCCTTAGGATTTTTGATAGCAGGGATTTTATTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGGTAATGCTATTCCTTAGGATTTTTGATAGCAGGGATTTTATTT  1039

seq1  TATTTATTTATTTATTTTTGGGATTTTTTTTTTTGAGACAGGGTTTTTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTTTGGGATTTTTTTTTTTGAGACAGGGTTTTTCT  1089

seq1  GTGTATCCCTGGAATTC  1114
      |||||||||||||||||
seq2  GTGTATCCCTGGAATTC  1106

seq1: chr6_134076567_134076767
seq2: B6Ng01-115N19.g_75_275

seq1  TGCCTCCTCAGTCAGTGATTTCACGTCAAATACCAATACTTCCCTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTCAGTCAGTGATTTCACGTCAAATACCAATACTTCCCTATTTG  50

seq1  CAATACCAGGACGGGTTTCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCT  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAATACCAGGACGGGTTTCTTTTCCTCCTCCTCCTCCTCCTCCTCCACCT  100

seq1  CCTCCTCCTCCTCTTCCTCTTCTTCCTCCTCCTCCTCCTCTTCTTCTTCT  150
      |||||||||||||||||||||||| |||||||||||||||||| || || 
seq2  CCTCCTCCTCCTCTTCCTCTTCTTTCTCCTCCTCCTCCTCTTCCTCCTCC  150

seq1  TCTTCTTCTTTTCTCCTCCTTCTTCTCCTCCTCCTTCTCCTCCTCCTTCT  200
      || | || || |  | |||| | |||||||||||||||||||||| ||||
seq2  TCCTTTTATTATTACGTCCTCCATCTCCTCCTCCTTCTCCTCCTCATTCT  200

seq1  C  201
      |
seq2  C  201