BAC Information

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BAC

Clone NameB6Ng01-116B13
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,442 - 18,835,968115,327,138 - 115,328,200
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116B13.bB6Ng01-116B13.g
ACCDH921183DH921184
length9741,063
definitionDH921183|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B13, 5' end.DH921184|Mus musculus domesticus DNA, BAC clone: B6Ng01-116B13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(115,327,138 - 115,328,200)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaatggc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttcttcagggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatattatt
tgtggctatgagaagggtgttgtt
gaattcacagattcactgaaagggacaaagggctaagtggaacatgggtt
tcctattatgaagtagagggaaacattacggatgttggaatgacttttga
atatatagtcaaggttctcttcaggaacataacttctggaatgaatacat
ataaatgaggacttattagattggcttatacaataggtcttgagtagacc
aacaatgaacatctacctgctggaaaggataagcacatagtgtctgccca
gcacgcaaggctgggtctctcagtagttcctagtactgggagccaggacg
attcttgagagccattggtctttatgccacctcagaaggccacagaagct
ggcttttgaagtaagcaaaggatggcataagcagatgcagaagcagacac
agcagctaacagatacgctcatcagcgagcttggagcgctatgttgtttt
ccttagactcctctatatcatctgattagctgctcagagataaagcccac
cttagggaacgtcttccccactgctcaatcccttctggaaatgccctcac
agaccctccctgaggtaagtctcttggctgatttcagatacaatcaagtt
gggaatcaagatgagccttggctctctccccacccctatttcatgacttc
cattttgaaatctctactccagtatattgtggtctttaagatttctgtaa
cttaaactctgtttttatgaaaccattatcacctccagtctcctttctct
tccctttctctcctcatccctcattcttctggtatctttcatgattttag
ggatactagttttgggtaaaattcattgaatgtctttcatattattttgt
aataattatctaggtccttgaaaataaattctttcactttttcattgtcc
ctaacatctcttacaaccatgttccctgtgtgtactgtaatttcatcttg
tcattctgtctctgcagtggggcatgtgacatgactatggaacatttttt
aaggtcttgaagtctctaaaggtctccattttcagacccaattgcaagct
aatatttttgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-116B13.b_48_575 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr10_115327138_115328200
seq2: B6Ng01-116B13.g_69_1131

seq1  GAATTCACAGATTCACTGAAAGGGACAAAGGGCTAAGTGGAACATGGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGATTCACTGAAAGGGACAAAGGGCTAAGTGGAACATGGGTT  50

seq1  TCCTATTATGAAGTAGAGGGAAACATTACGGATGTTGGAATGACTTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTATGAAGTAGAGGGAAACATTACGGATGTTGGAATGACTTTTGA  100

seq1  ATATATAGTCAAGGTTCTCTTCAGGAACATAACTTCTGGAATGAATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTCAAGGTTCTCTTCAGGAACATAACTTCTGGAATGAATACAT  150

seq1  ATAAATGAGGACTTATTAGATTGGCTTATACAATAGGTCTTGAGTAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAGGACTTATTAGATTGGCTTATACAATAGGTCTTGAGTAGACC  200

seq1  AACAATGAACATCTACCTGCTGGAAAGGATAAGCACATAGTGTCTGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGAACATCTACCTGCTGGAAAGGATAAGCACATAGTGTCTGCCCA  250

seq1  GCACGCAAGGCTGGGTCTCTCAGTAGTTCCTAGTACTGGGAGCCAGGACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCAAGGCTGGGTCTCTCAGTAGTTCCTAGTACTGGGAGCCAGGACG  300

seq1  ATTCTTGAGAGCCATTGGTCTTTATGCCACCTCAGAAGGCCACAGAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGAGAGCCATTGGTCTTTATGCCACCTCAGAAGGCCACAGAAGCT  350

seq1  GGCTTTTGAAGTAAGCAAAGGATGGCATAAGCAGATGCAGAAGCAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGAAGTAAGCAAAGGATGGCATAAGCAGATGCAGAAGCAGACAC  400

seq1  AGCAGCTAACAGATACGCTCATCAGCGAGCTTGGAGCGCTATGTTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTAACAGATACGCTCATCAGCGAGCTTGGAGCGCTATGTTGTTTT  450

seq1  CCTTAGACTCCTCTATATCATCTGATTAGCTGCTCAGAGATAAAGCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGACTCCTCTATATCATCTGATTAGCTGCTCAGAGATAAAGCCCAC  500

seq1  CTTAGGGAACGTCTTCCCCACTGCTCAATCCCTTCTGGAAATGCCCTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGAACGTCTTCCCCACTGCTCAATCCCTTCTGGAAATGCCCTCAC  550

seq1  AGACCCTCCCTGAGGTAAGTCTCTTGGCTGATTTCAGATACAATCAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTCCCTGAGGTAAGTCTCTTGGCTGATTTCAGATACAATCAAGTT  600

seq1  GGGAATCAAGATGAGCCTTGGCTCTCTCCCCACCCCTATTTCATGACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCAAGATGAGCCTTGGCTCTCTCCCCACCCCTATTTCATGACTTC  650

seq1  CATTTTGAAATCTCTACTCCAGTATATTGTGGTCTTTAAGATTTCTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGAAATCTCTACTCCAGTATATTGTGGTCTTTAAGATTTCTGTAA  700

seq1  CTTAAACTCTGTTTTTATGAAACCATTATCACCTCCAGTCTCCTTTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACTCTGTTTTTATGAAACCATTATCACCTCCAGTCTCCTTTCTCT  750

seq1  TCCCTTTCTCTCCTCATCCCTCATTCTTCTGGTATC-TTCATGATTTTAG  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCCTTTCTCTCCTCATCCCTCATTCTTCTGGTATCTTTCATGATTTTAG  800

seq1  GGATACTAGTTTTGGGT-AAATTCATTGAATGTCTTTCATATTATTTTGT  848
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGATACTAGTTTTGGGTAAAATTCATTGAATGTCTTTCATATTATTTTGT  850

seq1  AATAA-TATCTAGGTCCTTGAAAATAAATTCTTTCAC-TTTTCAATGTCC  896
      ||||| ||||||||||||||||||||||||||||||| |||||| |||||
seq2  AATAATTATCTAGGTCCTTGAAAATAAATTCTTTCACTTTTTCATTGTCC  900

seq1  CTAACATCTCTTACAACCAATGTTCCCTGTGTGTACTGTAATTTCATC-T  945
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  CTAACATCTCTTACAACC-ATGTTCCCTGTGTGTACTGTAATTTCATCTT  949

seq1  GTCATTCTGTCTCTGCAGTGGTGGCATGTGACAATGACTATGGAACATTT  995
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  GTCATTCTGTCTCTGCAGTGG-GGCATGTGAC-ATGACTATGGAACATTT  997

seq1  TTTAAGGTCCTGAAAGCTCTAAAATGTTCTCCATTTTCAGACCACATTTG  1045
      ||||||||| ||||  |||||||  | |||||||||||||||| || |||
seq2  TTTAAGGTCTTGAAGTCTCTAAA--GGTCTCCATTTTCAGACC-CAATTG  1044

seq1  CAAGCTGATA-TTTTGACT  1063
      |||||| ||| ||||||||
seq2  CAAGCTAATATTTTTGACT  1063