BAC Information

Click to search

BAC

Clone NameB6Ng01-116F13
Chromosome6 (Build37)
Map Location 132,898,637 - 132,899,758
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1
Downstream geneTas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F13.bB6Ng01-116F13.g
ACCDH921367DH921368
length1321,119
definitionDH921367|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F13, 5' end.DH921368|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagatctatgttcattcagagatgttgcacctaactctcaagag
actggaggccccagggagtttagaggtcaggtggaatgggggtgggggca
tccacgtggagacggggtggggaggggagtag
gaattcattagaatcatgaaaaaggccagggtatcaataaaaaaatgtaa
agaagtctaaagcttgcaaaatatacttacagaaacattgtctctaaaac
aggtaaagtcactgcccctctctttggtactcacttcatattttagttta
caaatgaagtatgttagaattgtccttggtactattacacttgtctggaa
agatggtctttccccaggggaaatctatgatattttcatccataatgaaa
agtatagttctatgactaagcaaagagctccatggtgaaaacagacctcc
cttacagaaaacaaaattttattttctaataactttttctgtatgatgta
caaaatgatctactacagacatattttgagttttggatgtgtgaatttat
taaacatatcaaagtaaaagaacaaataagaaaaaataaatagacgaaaa
atagcacaatagcaccatatccaatactgaaaatatccattagaaattaa
ctaggagagacccttcaagatattcaaatggaatttccattagatagttt
taggcgatgcagaatgttcactgtggtgaggcatttaaagaaaagaaagg
atagcaacagacatattgtggaacttgtcacagcttccacatgaaaactc
actggggaaagtaaaatagtcagcctgaaatcaaagttgagatttctccc
caggcatgagtttccatggttgaaattccagctacactattcctttttgg
catcattgaaaaaataatagtaacatctgttgaaatggttgccttttgct
gttctcaaggatacattgttgggctgtttatcctcccttatctctgagtt
aaatgggtcaacccattcccagaaaagagactttggaggtcattttaaaa
taaatatgcttagggcagaaagaaggaagacttgctcccatagacatatt
cctcatgagctctaagaatacatactaatttgccaatgtatagtcatcat
atagcccattaaacactaccatctttacctactttacacagcacacccca
ggtgttgcatttctgtttctgttcttattgaagtcatctttgccacctca
agaaacagccagaattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132898637_132899758
seq2: B6Ng01-116F13.g_68_1186

seq1  GAATTCATTAGAATCATGAAAAAGGCCAGGGTATCAATAAAAAAATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAATCATGAAAAAGGCCAGGGTATCAATAAAAAAATGTAA  50

seq1  AGAAGTCTAAAGCTTGCAAAATATACTTACAGAAACATTGTCTCTAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCTAAAGCTTGCAAAATATACTTACAGAAACATTGTCTCTAAAAC  100

seq1  AGGTAAAGTCACTGCCCCTCTCTTTGGTACTCACTTCATATTTTAGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGTCACTGCCCCTCTCTTTGGTACTCACTTCATATTTTAGTTTA  150

seq1  CAAATGAAGTATGTTAGAATTGTCCTTGGTACTATTACACTTGTCTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAAGTATGTTAGAATTGTCCTTGGTACTATTACACTTGTCTGGAA  200

seq1  AGATGGTCTTTCCCCAGGGGAAATCTATGATATTTTCATCCATAATGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTCTTTCCCCAGGGGAAATCTATGATATTTTCATCCATAATGAAA  250

seq1  AGTATAGTTCTATGACTAAGCAAAGAGCTCCATGGTGAAAACAGACCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGTTCTATGACTAAGCAAAGAGCTCCATGGTGAAAACAGACCTCC  300

seq1  CTTACAGAAAACAAAATTTTATTTTCTAATAACTTTTTCTGTATGATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGAAAACAAAATTTTATTTTCTAATAACTTTTTCTGTATGATGTA  350

seq1  CAAAATGATCTACTACAGACATATTTTGAGTTTTGGATGTGTGAATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGATCTACTACAGACATATTTTGAGTTTTGGATGTGTGAATTTAT  400

seq1  TAAACATATCAAAGTAAAAGAACAAATAAGAAAAAATAAATAGACGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATATCAAAGTAAAAGAACAAATAAGAAAAAATAAATAGACGAAAA  450

seq1  ATAGCACAATAGCACCATATCCAATACTGAAAATATCCATTAGAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACAATAGCACCATATCCAATACTGAAAATATCCATTAGAAATTAA  500

seq1  CTAGGAGAGACCCTTCAAGATATTCAAATGGAATTTCCATTAGATAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGAGACCCTTCAAGATATTCAAATGGAATTTCCATTAGATAGTTT  550

seq1  TAGGCGATGCAGAATGTTCACTGTGGTGAGGCATTTAAAGAAAAGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGATGCAGAATGTTCACTGTGGTGAGGCATTTAAAGAAAAGAAAGG  600

seq1  ATAGCAACAGACATATTGTGGAACTTGTCACAGCTTCCACATGAAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAACAGACATATTGTGGAACTTGTCACAGCTTCCACATGAAAACTC  650

seq1  ACTGGGGAAAGTAAAATAGTCAGCCTGAAATCAAAGTTGAGATTTCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGAAAGTAAAATAGTCAGCCTGAAATCAAAGTTGAGATTTCTCCC  700

seq1  CAGGCATGAGTTTCCATGGTTGAAATTCCAGCTACACTATTCCTTTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGAGTTTCCATGGTTGAAATTCCAGCTACACTATTCCTTTTTGG  750

seq1  CATCATTGAAAAAATAATAGTAACATCTGTTGAAATGGTTGCCTTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGAAAAAATAATAGTAACATCTGTTGAAATGGTTGCCTTTTGCT  800

seq1  GTTCTCAAGGATACATTGTTGGGCTGTTTATCCTCCCTTATCTCTGAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAGGATACATTGTTGGGCTGTTTATCCTCCCTTATCTCTGAGTT  850

seq1  AAAT-GGTCAACCCATTCCCAGAAAAGAGACTTTGGAGGTCATTTTAAAA  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGTCAACCCATTCCCAGAAAAGAGACTTTGGAGGTCATTTTAAAA  900

seq1  TAAATATGCTTAGGGCAGAAAAGAAGGAAGACTTGCTCCCATAGACATAT  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAATATGCTTAGGGCAG-AAAGAAGGAAGACTTGCTCCCATAGACATAT  949

seq1  TCCCCATGAGCTCTAAGAATACATACTAATTTGCCAATGTAATAGTCATC  999
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCTCATGAGCTCTAAGAATACATACTAATTTGCCAATGT-ATAGTCATC  998

seq1  ATATAGCCCATTAAACACTACCATCTTTACCTACTTTACACAGCCACACC  1049
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATATAGCCCATTAAACACTACCATCTTTACCTACTTTACACAG-CACACC  1047

seq1  CCAGGTGTTTGCATTTCTGTTTCTGTTCTTATTTGAGGTCATCTTTGCCA  1099
      ||||||| ||||||||||||||||||||||| |||| |||||||||||||
seq2  CCAGGTG-TTGCATTTCTGTTTCTGTTCTTA-TTGAAGTCATCTTTGCCA  1095

seq1  CCTCAGAGAACAGCCAG-ATTGTT  1122
      |||||   ||||||||| ||||||
seq2  CCTCAAGAAACAGCCAGAATTGTT  1119