BAC Information

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BAC

Clone NameB6Ng01-116N17
Chromosome6 (Build37)
Map Location 119,312,252 - 119,417,661
singlet/doubletdoublet
Overlap geneAdipor2, Wnt5b
Upstream geneBms1, Zfp248, Zfp9, Ankrd26, Cacna1c, Dcp1b, Cacna2d4, Lrtm2
Downstream geneFbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a, Il17ra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116N17.bB6Ng01-116N17.g
ACCDH921750DH921751
length96063
definitionDH921750|Mus musculus domesticus DNA, BAC clone: B6Ng01-116N17, 5' end.DH921751|Mus musculus domesticus DNA, BAC clone: B6Ng01-116N17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,416,705 - 119,417,661)(119,312,252 - 119,312,314)
sequence
gaattctgttttcctagggaagcaggccagggtgactcaactccaagatt
gcagcagcctggccgacaggctgcctgctgcttctgtccctctggctgtg
ttctccctgccctgaaggtcatttgtaccttgtaccaggctcctgtgttg
gatcgagataaatatttcagaaggctggagggggagggtcagctcgactg
ttctggaaaccttaatgtcttagggcctggctatcctgcaagcggcaggc
gtgggtgctgggcacagcaggccttcctggaaagtcctgtgagggtggac
caggcgtaatgtcttacataatgtcagatccacaggaattttggggatca
gccctgttggagagttcccatccaggttcccttctctgccaagagaaggt
tcaaggtctaacaggaaagttagactctaaggccttgctgcttctcattc
catgagctggggagagacagtgtggaagtcaaaccatgtctttcttgaga
gcaggtgctgctggggttccctgaatggcggctaggtgccaagaggtcag
tgattaacatcattctgtgtgaaaattcggcctggagatttctagagttg
gcacaactttggactaacagtttggtggggttcttgattgttgtttaact
ttcatgttttgtttttttcatcttttggagatggaggctcactacatagt
ctagggcatcctggcactagctccccatccacctgagcctccctggtacc
aggttacaggtaccaccgtgttcagccttttattttaaattttcctgtta
agcagagagtcaagtaatctatttaagtagtggatgttactaatgttacc
caatgtgaggtccttattagcttttgtttctgatgtttgtacattttgag
tagaacccagggctttcttgtgtgtttgcccaagtgctcttgcctctgag
ctgctttgac
aaagccccagatacacagaccttcatcagggacagcagatgttacctggg
ggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119416705_119417661
seq2: B6Ng01-116N17.b_44_1003 (reverse)

seq1  GTCAAAGCAGCTCAGAGGC-AGAGCACTTGGGCAAACACAC-AGGAAGCC  48
      ||||||||||||||||||| ||||||||||||||||||||| || |||||
seq2  GTCAAAGCAGCTCAGAGGCAAGAGCACTTGGGCAAACACACAAGAAAGCC  50

seq1  CTGGGTTCTACTCAAAATGTAACAAACATCAGAAACAAAAGCTAATAAGG  98
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGGGTTCTACTCAAAATGT-ACAAACATCAGAAACAAAAGCTAATAAGG  99

seq1  ACCTCACATT-GGTTACATTAGTAACATCCACTACTTGAATAGATTACTT  147
      |||||||||| ||| |||||||||||||||||||||| ||||||||||||
seq2  ACCTCACATTGGGTAACATTAGTAACATCCACTACTTAAATAGATTACTT  149

seq1  GACTCTCTGCTTAACAGGAAAATTTAAAATAAAAGGCTGAACACGGTGGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCTGCTTAACAGGAAAATTTAAAATAAAAGGCTGAACACGGTGGT  199

seq1  ACCTGTAACCTGGTACCAGGGAGGCTCAGGTGGATGGGGAGCTAGTGCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAACCTGGTACCAGGGAGGCTCAGGTGGATGGGGAGCTAGTGCCA  249

seq1  GGATGCCCTAGACTATGTAGTGAGCCTCCATCTCC-AAAGATGAAAAAAA  296
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGATGCCCTAGACTATGTAGTGAGCCTCCATCTCCAAAAGATGAAAAAAA  299

seq1  CAAAACATGAAAGTTAAACAACAATCAAGAACCCCACCAAACTGTTAGTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGAAAGTTAAACAACAATCAAGAACCCCACCAAACTGTTAGTC  349

seq1  CAAAGTTGTGCCAACTCTAGAAATCTCCAGGCCGAATTTTCACACAGAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGTGCCAACTCTAGAAATCTCCAGGCCGAATTTTCACACAGAAT  399

seq1  GATGTTAATCACTGACCTCTTGGCACCTAGCCGCCATTCAGGGAACCCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAATCACTGACCTCTTGGCACCTAGCCGCCATTCAGGGAACCCCA  449

seq1  GCAGCACCTGCTCTCAAGAAAGACATGGTTTGACTTCCACACTGTCTCTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACCTGCTCTCAAGAAAGACATGGTTTGACTTCCACACTGTCTCTC  499

seq1  CCCAGCTCATGGAATGAGAAGCAGCAAGGCCTTAGAGTCTAACTTTCCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTCATGGAATGAGAAGCAGCAAGGCCTTAGAGTCTAACTTTCCTG  549

seq1  TTAGACCTTGAACCTTCTCTTGGCAGAGAAGGGAACCTGGATGGGAACTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTTGAACCTTCTCTTGGCAGAGAAGGGAACCTGGATGGGAACTC  599

seq1  TCCAACAGGGCTGATCCCCAAAATTCCTGTGGATCTGACATTATGTAAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGGGCTGATCCCCAAAATTCCTGTGGATCTGACATTATGTAAGA  649

seq1  CATTACGCCTGGTCCACCCTCACAGGACTTTCCAGGAAGGCCTGCTGTGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACGCCTGGTCCACCCTCACAGGACTTTCCAGGAAGGCCTGCTGTGC  699

seq1  CCAGCACCCACGCCTGCCGCTTGCAGGATAGCCAGGCCCTAAGACATTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCCACGCCTGCCGCTTGCAGGATAGCCAGGCCCTAAGACATTAA  749

seq1  GGTTTCCAGAACAGTCGAGCTGACCCTCCCCCTCCAGCCTTCTGAAATAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGAACAGTCGAGCTGACCCTCCCCCTCCAGCCTTCTGAAATAT  799

seq1  TTATCTCGATCCAACACAGGAGCCTGGTACAAGGTACAAATGACCTTCAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCGATCCAACACAGGAGCCTGGTACAAGGTACAAATGACCTTCAG  849

seq1  GGCAGGGAGAACACAGCCAGAGGGACAGAAGCAGCAGGCAGCCTGTCGGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGAACACAGCCAGAGGGACAGAAGCAGCAGGCAGCCTGTCGGC  899

seq1  CAGGCTGCTGCAATCTTGGAGTTGAGTCACCCTGGCCTGCTTCCCTAGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCTGCAATCTTGGAGTTGAGTCACCCTGGCCTGCTTCCCTAGGA  949

seq1  AAACAGAATTC  957
      |||||||||||
seq2  AAACAGAATTC  960

seq1: chr6_119312252_119312314
seq2: B6Ng01-116N17.g_75_137

seq1  AAAGCCCCAGATACACAGACCTTCATCAGGGACAGCAGATGTTACCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCCAGATACACAGACCTTCATCAGGGACAGCAGATGTTACCTGGG  50

seq1  GGGGGGGGGGGGG  63
      |||||||||||||
seq2  GGGGGGGGGGGGG  63