BAC Information

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BAC

Clone NameB6Ng01-117L15
Chromosome6 (Build37)
Map Location 18,835,428 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117L15.bB6Ng01-117L15.g
ACCDH922393DH922394
length8651,153
definitionDH922393|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L15, 5' end.DH922394|Mus musculus domesticus DNA, BAC clone: B6Ng01-117L15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcggttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctgtatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgttaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccataatcttcaaggcttttcccca
ctttctccactataagtttcagtgattctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaagtagataagtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaaa
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctactggtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttacccttgagaagactttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagctatt
tttacaatgtgatcctgccaatccatgagcatgggggatctttccatctt
ctgagatctttaatt

gaattccaagtctgattccaccagcagcagaaatagagatactgggcctg
gcttgagcatttgaatcctcaaagcccaccttcactagcacacttactcc
aacaaggtcacatctactccaaaatccacacctcctaataatcccactac
ctatgaagttatgaaggcaattgtgattcaaactgtcacatgctatataa
caatttactcttagctgaaacaatccatcctggaaggaaacttaatgctc
tgtaagtgcaaactcactcgcagtacagaactgaattttcttaggctcac
aaggcttctttctgagaacaatgaaatggaaacccacaactgatggagga
ggctcaccaacagtgttgcctggaggagaatcgttccaagttgtctagct
gccagtaattgatgtgtagagttccaggaatgaagcttttgtaattcatc
attcatttaggatgagtatttccatggtggtgattcctttgagttgtccc
ttctcctaagtctagaacctcatccacattcccttaagtggtccaataaa
ggcattagtttgacaaattggactttgttataattgttagtttgggtgtc
ttttagtcttctttcagagggaaatagacctttgctttgtgtctccagag
gaaaagttatatactacacctttccatcatggacattaaactaacattat
ttgactgtttgtttgaatattgttatcttgagtattatgattaatggcct
tgctggtatttaacctaaatgtatttggcatagtttatgagacttccttg
acaccaaacatgcatatgtgcaatgtatattttgcttcttcctgtatctg
tctaaccccagttttccttcatatatgactttacttcatatataaatttt
catggatgatactatattttcacttttgttttcactagaagttgagccta
aaactttacctgccttgtacactaatagccaggaattagatatgcatcat
gattacagaaatgaatgaaaggtcaattatgctgttaccatcaaatattt
atacaacgtaaatcaggtatttttccacacttatacttgggatttaggat
cgatcgatagtagaagatagacatgattgagagaaatatagaccgaagta
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835428_18835968
seq2: B6Ng01-117L15.b_44_586 (reverse)

seq1  ATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCACTTGATC  50
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  ATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCATTTGATC  50

seq1  TTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAA  100

seq1  CAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCG  150
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  CAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCG  150

seq1  ATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  200
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  ATCCATACTTATCTACTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  200

seq1  CTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAA  250
      |||||||||||||||||  ||||||||||||||| |||||||||||||||
seq2  CTTCACATAAAACCAGAATCACTGAAACTTATAGTGGAGAAAGTGGGGAA  250

seq1  AAGCCTTGAAGA-TATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCA  299
      |||||||||||| |||||||| ||||||||| ||||||||||||||||||
seq2  AAGCCTTGAAGATTATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCA  300

seq1  ATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACT  348
      ||||| |||||||| || | ||||||  ||||||||||||||||||||||
seq2  ATGGCTTGTGCTGTAAGATCGAGAATTAACAAATGGGACCTAATGAAACT  350

seq1  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  450

seq1  ATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  498
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATATCCAACATATATACAGAACTCAAGAAGGTGGACTTCAGAAAATCAAA  500

seq1  TAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  541
      |||||||||||| |||||||||||||||| |||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAACCGAACAAAGAATTC  543


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